BLASTX nr result

ID: Ephedra25_contig00001181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001181
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76811.1| unknown [Picea sitchensis]                              66   4e-09
ref|XP_002326421.1| predicted protein [Populus trichocarpa] gi|5...    55   1e-05

>gb|ADE76811.1| unknown [Picea sitchensis]
          Length = 101

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = -3

Query: 497 GCTCCSG-QAAKNVXXXXXXXXXXXCGLPDKPYGVCAFTPKTCNCSSCG 354
           GCTCC+  +  KNV           CGLPDKPYGVCAFTPK CNC+SCG
Sbjct: 51  GCTCCAATENNKNVCTMSACCYSITCGLPDKPYGVCAFTPKACNCTSCG 99


>ref|XP_002326421.1| predicted protein [Populus trichocarpa]
           gi|566175713|ref|XP_006381289.1| hypothetical protein
           POPTR_0006s11440g [Populus trichocarpa]
           gi|550335990|gb|ERP59086.1| hypothetical protein
           POPTR_0006s11440g [Populus trichocarpa]
          Length = 140

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/46 (52%), Positives = 27/46 (58%)
 Frame = -3

Query: 494 CTCCSGQAAKNVXXXXXXXXXXXCGLPDKPYGVCAFTPKTCNCSSC 357
           C CC+G A  N              LP+KPYGVCAF PKTCNC+SC
Sbjct: 93  CKCCAGAATTNCATMPCCFGIDCQ-LPNKPYGVCAFVPKTCNCTSC 137


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