BLASTX nr result
ID: Ephedra25_contig00001116
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00001116
(468 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW45384.1| triple gene block protein 3 [Plantago asiatica mo... 87 2e-15
ref|NP_620839.1| 13K triple gene block protein [Plantago asiatic... 81 2e-13
dbj|BAG12151.1| triple gene block protein3 [Plantago asiatica mo... 80 4e-13
dbj|BAG12126.1| triple gene block protein3 [Plantago asiatica mo... 80 4e-13
dbj|BAG12156.1| triple gene block protein3 [Plantago asiatica mo... 79 6e-13
gb|AAX19934.1| triple gene block protein 3 [Nandina mosaic virus] 77 2e-12
gb|AGW45383.1| triple gene block protein 2 [Plantago asiatica mo... 76 5e-12
dbj|BAG12125.1| triple gene block protein2 [Plantago asiatica mo... 76 5e-12
dbj|BAG12155.1| triple gene block protein2 [Plantago asiatica mo... 75 7e-12
ref|NP_620838.1| 12K triple gene block protein [Plantago asiatic... 72 6e-11
gb|AAX19933.1| triple gene block protein 2 [Nandina mosaic virus] 72 1e-10
gb|AAX19935.1| coat protein [Nandina mosaic virus] 66 5e-09
dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus] 64 2e-08
dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus] gi... 64 2e-08
ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]... 63 4e-08
dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus] 62 6e-08
gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus] 61 1e-07
gb|ACE62921.1| coat protein [Tulip virus X] 57 3e-06
ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BA... 55 7e-06
>gb|AGW45384.1| triple gene block protein 3 [Plantago asiatica mosaic virus]
Length = 121
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = +1
Query: 205 PRPSCVIIITGHSTVIQGNCQLPPHLILAAHPRGLSLERLSKFQDLLNHGSQ 360
P+P C IIITGHST+IQG C L P L+LAAHPRGLSLE SKFQD+L+HG+Q
Sbjct: 65 PKPGCTIIITGHSTIIQGQCNLRPELVLAAHPRGLSLELFSKFQDILHHGTQ 116
>ref|NP_620839.1| 13K triple gene block protein [Plantago asiatica mosaic virus]
gi|1174979|sp|Q07520.1|TGB3_P1AMV RecName: Full=Movement
protein TGBp3; AltName: Full=13 kDa protein; AltName:
Full=Triple gene block 3 protein; Short=TGBp3
gi|299809|gb|AAB26350.1| 13 kda putative
membrane-associated protein [Plantago asiatica mosaic
virus] gi|311648|emb|CAA79764.1| 13K-protein [Plantago
asiatica mosaic virus]
Length = 121
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +1
Query: 205 PRPSCVIIITGHSTVIQGNCQLPPHLILAAHPRGLSLERLSKFQDLLNHGSQQGSH 372
P P C I+ITGH+T+IQG+C +PP L+LAAHPRGLSLE+ KF + L GSQ SH
Sbjct: 65 PNPGCTIVITGHTTIIQGSCPIPPQLVLAAHPRGLSLEQYLKFTNTLPDGSQHRSH 120
>dbj|BAG12151.1| triple gene block protein3 [Plantago asiatica mosaic virus]
Length = 121
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +1
Query: 205 PRPSCVIIITGHSTVIQGNCQLPPHLILAAHPRGLSLERLSKFQDLLNHGSQQGS 369
P+P C ++ITGHST+IQG C P L+LAAHPRGLSLE +KF+ L+HG+Q S
Sbjct: 65 PKPGCTVVITGHSTIIQGQCDFRPELVLAAHPRGLSLELFAKFKQTLHHGTQPSS 119
>dbj|BAG12126.1| triple gene block protein3 [Plantago asiatica mosaic virus]
gi|169219480|dbj|BAG12131.1| triple gene block protein3
[Plantago asiatica mosaic virus]
gi|169219486|dbj|BAG12136.1| triple gene block protein3
[Plantago asiatica mosaic virus]
gi|169219492|dbj|BAG12141.1| triple gene block protein3
[Plantago asiatica mosaic virus]
gi|169219498|dbj|BAG12146.1| triple gene block protein3
[Plantago asiatica mosaic virus]
Length = 121
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +1
Query: 205 PRPSCVIIITGHSTVIQGNCQLPPHLILAAHPRGLSLERLSKFQDLLNHGSQQGS 369
P+P C ++ITGHST+IQG C P L+LAAHPRGLSLE +KF+ L+HG+Q S
Sbjct: 65 PKPGCTVVITGHSTIIQGQCDFRPELVLAAHPRGLSLELFAKFKQTLHHGTQPSS 119
>dbj|BAG12156.1| triple gene block protein3 [Plantago asiatica mosaic virus]
Length = 121
Score = 79.0 bits (193), Expect = 6e-13
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 205 PRPSCVIIITGHSTVIQGNCQLPPHLILAAHPRGLSLERLSKFQDLLNHGSQ 360
P+P C I+ITGHST+IQG C P L+LAAHPRGLSLE +KF+ L+HG+Q
Sbjct: 65 PKPGCTIVITGHSTIIQGQCDFRPELVLAAHPRGLSLELFAKFKQTLHHGTQ 116
>gb|AAX19934.1| triple gene block protein 3 [Nandina mosaic virus]
Length = 121
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 205 PRPSCVIIITGHSTVIQGNCQLPPHLILAAHPRGLSLERLSKFQDLLNHGSQQGSHH 375
P+ C IIITGH+T IQG C PP L+LAAHP+GLSLE SKF +L HG + +H
Sbjct: 65 PKSGCTIIITGHTTTIQGQCSTPPQLVLAAHPKGLSLELYSKFNELTGHGPHRSPNH 121
>gb|AGW45383.1| triple gene block protein 2 [Plantago asiatica mosaic virus]
Length = 110
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +3
Query: 3 DNLHALPHGGKYIDGTKSIHYFSPSSYKSKDPLPFAFXXXXXXXXXXXXXXXXXXXXXHC 182
DNLHALPHGG+Y+DGTKSI YFSP+ KS+DPLP AF HC
Sbjct: 43 DNLHALPHGGRYVDGTKSISYFSPNHSKSRDPLPLAFLTVLTLSGLILLLSRRGRSTTHC 102
Query: 183 SGCGKLH 203
CGK H
Sbjct: 103 PCCGKSH 109
>dbj|BAG12125.1| triple gene block protein2 [Plantago asiatica mosaic virus]
gi|169219479|dbj|BAG12130.1| triple gene block protein2
[Plantago asiatica mosaic virus]
gi|169219485|dbj|BAG12135.1| triple gene block protein2
[Plantago asiatica mosaic virus]
gi|169219491|dbj|BAG12140.1| triple gene block protein2
[Plantago asiatica mosaic virus]
gi|169219497|dbj|BAG12145.1| triple gene block protein2
[Plantago asiatica mosaic virus]
gi|169219503|dbj|BAG12150.1| triple gene block protein2
[Plantago asiatica mosaic virus]
Length = 110
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +3
Query: 3 DNLHALPHGGKYIDGTKSIHYFSPSSYKSKDPLPFAFXXXXXXXXXXXXXXXXXXXXXHC 182
DNLHALPHGG+Y+DGTKSI YFSP+ KS+DPLP AF HC
Sbjct: 43 DNLHALPHGGRYVDGTKSISYFSPNHSKSRDPLPLAFLTVLILSGLILLLSRRGRHTTHC 102
Query: 183 SGCGKLH 203
CGK H
Sbjct: 103 PCCGKSH 109
>dbj|BAG12155.1| triple gene block protein2 [Plantago asiatica mosaic virus]
Length = 110
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +3
Query: 3 DNLHALPHGGKYIDGTKSIHYFSPSSYKSKDPLPFAFXXXXXXXXXXXXXXXXXXXXXHC 182
DNLHALPHGG+Y+DGTKSI YFSP+ KS+DPLP AF HC
Sbjct: 43 DNLHALPHGGRYVDGTKSISYFSPNHSKSRDPLPLAFLTVLILSGLILLLSRRGRYTAHC 102
Query: 183 SGCGKLH 203
CGK H
Sbjct: 103 PCCGKPH 109
>ref|NP_620838.1| 12K triple gene block protein [Plantago asiatica mosaic virus]
gi|1174973|sp|Q07519.1|TGB2_P1AMV RecName: Full=Movement
protein TGB2; AltName: Full=12 kDa protein; AltName:
Full=Triple gene block 2 protein; Short=TGBp2
gi|299808|gb|AAB26349.1| 12 kda putative
membrane-associated protein [Plantago asiatica mosaic
virus] gi|311647|emb|CAA79763.1| 12K-protein [Plantago
asiatica mosaic virus]
Length = 110
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/67 (49%), Positives = 38/67 (56%)
Frame = +3
Query: 3 DNLHALPHGGKYIDGTKSIHYFSPSSYKSKDPLPFAFXXXXXXXXXXXXXXXXXXXXXHC 182
DNLHALPHGG+Y+DGTKSI YFSPS+ K++DP PFAF C
Sbjct: 43 DNLHALPHGGRYVDGTKSISYFSPSASKTRDPFPFAFLLILTLSGLILLLSRRRSNPHSC 102
Query: 183 SGCGKLH 203
CG H
Sbjct: 103 PSCGTPH 109
>gb|AAX19933.1| triple gene block protein 2 [Nandina mosaic virus]
Length = 110
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +3
Query: 3 DNLHALPHGGKYIDGTKSIHYFSPSSYKSKDPLPFAFXXXXXXXXXXXXXXXXXXXXXHC 182
DNLHALPHGG+Y+DGTKSI YFSP+S +DP P+AF +C
Sbjct: 43 DNLHALPHGGRYVDGTKSISYFSPNSSTRRDPFPYAFLLVFTLSGLILLLSRCRRPTANC 102
Query: 183 SGCGKLH 203
CG+LH
Sbjct: 103 PCCGRLH 109
>gb|AAX19935.1| coat protein [Nandina mosaic virus]
Length = 207
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +2
Query: 350 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTT 466
MAL APTTDALAAMTFQVSSPSVPTA EL TI++GLTT
Sbjct: 1 MALTAAPTTDALAAMTFQVSSPSVPTASELNTITQGLTT 39
>dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +2
Query: 350 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTT 466
MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTT
Sbjct: 1 MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTT 39
>dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus]
gi|169219481|dbj|BAG12132.1| coat protein [Plantago
asiatica mosaic virus] gi|169219487|dbj|BAG12137.1| coat
protein [Plantago asiatica mosaic virus]
gi|169219499|dbj|BAG12147.1| coat protein [Plantago
asiatica mosaic virus] gi|169219505|dbj|BAG12152.1| coat
protein [Plantago asiatica mosaic virus]
Length = 207
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +2
Query: 350 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTT 466
MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTT
Sbjct: 1 MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTT 39
>ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]
gi|1168989|sp|Q07506.1|COAT_P1AMV RecName: Full=Coat
protein; AltName: Full=Capsid protein; Short=CP
gi|311649|emb|CAA79765.1| capsid protein [Plantago
asiatica mosaic virus]
Length = 207
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2
Query: 350 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTT 466
MALN APT DALAAM F VSSPSVPTA+EL+TI+ GLTT
Sbjct: 1 MALNTAPTADALAAMAFPVSSPSVPTAQELDTITSGLTT 39
>dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +2
Query: 350 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTT 466
MALN+APT+DAL AMTF VSSPSVPTA EL TI++GLTT
Sbjct: 1 MALNQAPTSDALNAMTFDVSSPSVPTAAELATITQGLTT 39
>gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2
Query: 350 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTT 466
MALN+AP+ DAL AMTF VSSPSVPTA EL+TI++GLTT
Sbjct: 1 MALNQAPSPDALDAMTFAVSSPSVPTAAELDTITRGLTT 39
>gb|ACE62921.1| coat protein [Tulip virus X]
Length = 207
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = +2
Query: 350 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTT 466
MALN APT +ALAAMT VSSP+VPT ELETI+ GLTT
Sbjct: 1 MALNTAPTPEALAAMTLAVSSPAVPTPLELETITAGLTT 39
>ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BAC16789.1| coat
protein [Tulip virus X]
Length = 207
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +2
Query: 350 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTT 466
MALN AP +ALAAMT +VSSP+VPT EL+TI+ GLTT
Sbjct: 1 MALNTAPNPEALAAMTLEVSSPAVPTPAELDTIAAGLTT 39