BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001095
         (671 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP46207.1| putative retrotransposon protein [Oryza sativa Ja...   167   3e-39
emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]         167   3e-39
gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]    167   3e-39
gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]     167   4e-39
emb|CAH66946.1| B0809H07.1 [Oryza sativa Indica Group]                167   4e-39
emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi...   166   5e-39
gb|ABA95230.1| retrotransposon protein, putative, unclassified [...   162   7e-38
gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap...   160   3e-37
gb|AAP54332.2| retrotransposon protein, putative, unclassified [...   160   3e-37
emb|CAN79872.1| hypothetical protein VITISV_017186 [Vitis vinifera]   151   2e-36
emb|CAN65603.1| hypothetical protein VITISV_021511 [Vitis vinifera]   153   2e-36
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]   151   3e-36
gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja...   145   4e-36
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   146   4e-36
emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]   148   7e-36
gb|EXB36428.1| hypothetical protein L484_009995 [Morus notabilis]     155   1e-35
gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group...   155   1e-35
gb|ABA93730.1| retrotransposon protein, putative, unclassified [...   155   1e-35
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   144   2e-35
emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa Japonica Group]         154   2e-35

>gb|AAP46207.1| putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1176

 Score =  167 bits (423), Expect = 3e-39
 Identities = 83/185 (44%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H  A  RIL+Y+  +   GL F KN
Sbjct: 954  YQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKN 1013

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L +E Y DA++    D+ +ST GY + +GG+L+SW S+KQ VV+ ST E EYRA+   
Sbjct: 1014 GHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYRAMSVS 1073

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++EL+WL+NL  ++ +P+  P+K+ CDN+SAI +  NPV H+RTKH+E+  + ++E  D 
Sbjct: 1074 LSELLWLRNLLSELMLPVDTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIKEKLDE 1133

Query: 535  G*LML 549
            G L L
Sbjct: 1134 GVLEL 1138


>emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]
          Length = 1262

 Score =  167 bits (423), Expect = 3e-39
 Identities = 83/185 (44%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H  A  RIL+Y+  +   GL F KN
Sbjct: 1040 YQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKN 1099

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L +E Y DA++    D+ +ST GY + +GG+L+SW S+KQ VV+ ST E EYRA+   
Sbjct: 1100 GHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYRAMSVS 1159

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++EL+WL+NL  ++ +P+  P+K+ CDN+SAI +  NPV H+RTKH+E+  + ++E  D 
Sbjct: 1160 LSELLWLRNLLSELMLPVDTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIKEKLDE 1219

Query: 535  G*LML 549
            G L L
Sbjct: 1220 GVLEL 1224


>gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]
          Length = 1472

 Score =  167 bits (423), Expect = 3e-39
 Identities = 83/185 (44%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H  A  RIL+Y+  +   GL F KN
Sbjct: 1250 YQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKN 1309

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L +E Y DA++    D+ +ST GY + +GG+L+SW S+KQ VV+ ST E EYRA+   
Sbjct: 1310 GHLEVEGYCDAHWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYRAMSVS 1369

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++EL+WL+NL  ++ +P+  P+K+ CDN+SAI +  NPV H+RTKH+E+  + ++E  D 
Sbjct: 1370 LSELLWLRNLLSELMLPVDTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIKEKLDE 1429

Query: 535  G*LML 549
            G L L
Sbjct: 1430 GVLEL 1434


>gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1299

 Score =  167 bits (422), Expect = 4e-39
 Identities = 84/185 (45%), Positives = 120/185 (64%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H +A  RIL+Y+  +   GL F KN
Sbjct: 1077 YQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSSHMEAVYRILRYLKGSPGKGLWFKKN 1136

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L IE Y DA++    D+ +ST GY + +GG+L+SW S+KQ VV+ ST E EYRA+   
Sbjct: 1137 GHLKIEGYCDADWASCLDDRRSTSGYCVYVGGNLVSWRSKKQSVVSRSTAEAEYRAMAAS 1196

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++EL+WL+NL  ++ I    P+K+ CDN+SAI +  NPV H+RTKH+E+  + ++E  D 
Sbjct: 1197 LSELLWLRNLLVELKILGNTPMKLLCDNKSAINIANNPVQHDRTKHVEIDRFFIKEKLDE 1256

Query: 535  G*LML 549
            G L L
Sbjct: 1257 GVLEL 1261


>emb|CAH66946.1| B0809H07.1 [Oryza sativa Indica Group]
          Length = 1120

 Score =  167 bits (422), Expect = 4e-39
 Identities = 84/185 (45%), Positives = 120/185 (64%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H +A  RIL+Y+  +   GL F KN
Sbjct: 898  YQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSSHMEAVYRILRYLKGSPGKGLWFKKN 957

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L IE Y DA++    D+ +ST GY + +GG+L+SW S+KQ VV+ ST E EYRA+   
Sbjct: 958  GHLKIEGYCDADWASCLDDRRSTSGYCVYVGGNLVSWRSKKQSVVSRSTAEAEYRAMAAS 1017

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++EL+WL+NL  ++ I    P+K+ CDN+SAI +  NPV H+RTKH+E+  + ++E  D 
Sbjct: 1018 LSELLWLRNLLVELKILGNTPMKLLCDNKSAINIANNPVQHDRTKHVEIDRFFIKEKLDE 1077

Query: 535  G*LML 549
            G L L
Sbjct: 1078 GVLEL 1082


>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
          Length = 806

 Score =  166 bits (421), Expect = 5e-39
 Identities = 82/185 (44%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H  A  RIL+Y+  +   GL F KN
Sbjct: 584  YQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKN 643

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L +E Y DA++    D+ +ST GY + +GG+L+SW S+KQ VV+ ST E EYRA+   
Sbjct: 644  GHLGVEGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYRAMSVS 703

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++EL+WL+NL  ++ + + +P+K+ CDN+SAI +  NPV H+RTKH+E+  + ++E  D 
Sbjct: 704  LSELLWLRNLLSELKLLMNIPMKLWCDNKSAISIANNPVQHDRTKHVEIDRFFIKEKLDE 763

Query: 535  G*LML 549
            G L L
Sbjct: 764  GILKL 768


>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 936

 Score =  162 bits (411), Expect = 7e-38
 Identities = 81/185 (43%), Positives = 118/185 (63%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H     RIL+Y+  +   G+ F KN
Sbjct: 714  YQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKN 773

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L +E Y DA++G   D+ +ST GY + IGG+L+SW S+KQ VV+ ST E EYR++   
Sbjct: 774  GHLDVEGYCDADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKQSVVSRSTAEAEYRSMSMS 833

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++EL+WLKNL  ++ +     +K+ CDN+SAI +  NPV H+RTKH+E+  + ++E  D 
Sbjct: 834  LSELLWLKNLLAELKLSTSTSMKLWCDNKSAINIANNPVQHDRTKHVEIDRFFIKERMDE 893

Query: 535  G*LML 549
            G L L
Sbjct: 894  GTLNL 898


>gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group]
          Length = 894

 Score =  160 bits (406), Expect = 3e-37
 Identities = 80/185 (43%), Positives = 118/185 (63%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H     RIL+Y+  +   G+ F KN
Sbjct: 672  YQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKN 731

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L +E Y DA++G   D+ +ST GY + IGG+L+SW S+K+ VV+ ST E EYR++   
Sbjct: 732  GHLDMEGYCDADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKESVVSRSTAEAEYRSMSMS 791

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++EL+WLKNL  ++ +     +K+ CDN+SAI +  NPV H+RTKH+E+  + ++E  D 
Sbjct: 792  LSELLWLKNLLAELKLSTSTSMKLWCDNKSAINIANNPVQHDRTKHVEIDRFFIKERMDE 851

Query: 535  G*LML 549
            G L L
Sbjct: 852  GTLNL 856


>gb|AAP54332.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 822

 Score =  160 bits (406), Expect = 3e-37
 Identities = 80/185 (43%), Positives = 118/185 (63%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H     RIL+Y+  +   G+ F KN
Sbjct: 600  YQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKN 659

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L +E Y DA++G   D+ +ST GY + IGG+L+SW S+K+ VV+ ST E EYR++   
Sbjct: 660  GHLDMEGYCDADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKESVVSRSTAEAEYRSMSMS 719

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++EL+WLKNL  ++ +     +K+ CDN+SAI +  NPV H+RTKH+E+  + ++E  D 
Sbjct: 720  LSELLWLKNLLAELKLSTSTSMKLWCDNKSAINIANNPVQHDRTKHVEIDRFFIKERMDE 779

Query: 535  G*LML 549
            G L L
Sbjct: 780  GTLNL 784


>emb|CAN79872.1| hypothetical protein VITISV_017186 [Vitis vinifera]
          Length = 908

 Score =  151 bits (382), Expect(2) = 2e-36
 Identities = 72/176 (40%), Positives = 116/176 (65%), Gaps = 2/176 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL++T  D+ + VS +++ MH   + H +A  RIL+Y+  T   GL F K+
Sbjct: 686  YQKLVGKLIYLSHTRPDIAFAVSIVSQFMHSPYEVHLEAVYRILRYLKSTPGKGLFFKKS 745

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
               +IEAY DA++     + +S+ GY   I G+L++W S+KQ VV  S+ E EYRA+   
Sbjct: 746  KQKTIEAYTDADWAGLVTDRRSSSGYCTYIWGNLVTWRSKKQSVVARSSAEAEYRAMAHG 805

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVRE 522
            + E++WLK +  ++  PL++P+K+ CDN++AI +  NPV H+RTKH+E+  + ++E
Sbjct: 806  VCEILWLKKILEELKRPLEMPMKLYCDNKAAISIAHNPVQHDRTKHVEIDRHFIKE 861



 Score = 27.3 bits (59), Expect(2) = 2e-36
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 510 FGSRKLRLGMIDVKYIISNKQLADGLSKVLNSKNFENFLEGLGL 641
           F   KL   +I + ++ + +Q+AD L+K L   +FE  +  LG+
Sbjct: 858 FIKEKLEASIICMSFVPTTQQIADILTKGLFRSSFEFLISKLGM 901


>emb|CAN65603.1| hypothetical protein VITISV_021511 [Vitis vinifera]
          Length = 491

 Score =  153 bits (386), Expect(2) = 2e-36
 Identities = 73/176 (41%), Positives = 116/176 (65%), Gaps = 2/176 (1%)
 Frame = +1

Query: 1   YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
           YQ L+G LIYL +T  D+ + VS +++ MH   + H +A  RIL+Y+  T   GL F K+
Sbjct: 269 YQKLVGKLIYLCHTRPDIAFAVSIVSQFMHSPYEVHFEAVYRILRYLKSTPGKGLFFKKS 328

Query: 181 NDLSIEAYFDANFGKD--EGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              +IEAY +A++     + KST GY   I G+L++W S+KQ VV  S+ E EYRA+   
Sbjct: 329 EQKTIEAYTNADWAGSVIDRKSTSGYCTYIWGNLVTWRSKKQSVVARSSAEAEYRAMAHG 388

Query: 355 IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVRE 522
           + E++WLK +  ++ IPL++P+K+ CDN++AI +  NPV H+RTKH+E+  + +++
Sbjct: 389 VCEILWLKKILEELKIPLEMPMKLYCDNKAAISIAHNPVQHDRTKHVEIDRHFIKD 444



 Score = 25.8 bits (55), Expect(2) = 2e-36
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 522 KLRLGMIDVKYIISNKQLADGLSKVLNSKNFENFLEGLGL 641
           KL   +I + +I + +Q+ D L+K L   +FE  +  LG+
Sbjct: 445 KLEASIICMSFISTTQQIVDILTKGLFRSSFEFLISKLGM 484


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score =  151 bits (382), Expect(2) = 3e-36
 Identities = 72/176 (40%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL++T  D+ + VS +++ MH   + H +A  RIL+Y+  T   GL F K+
Sbjct: 1283 YQKLVGKLIYLSHTRPDIAFAVSIVSQFMHSPYEVHLEAVYRILRYLKSTPGKGLFFKKS 1342

Query: 181  NDLSIEAYFDANFGKD--EGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
               +IEAY DA++     + +ST GY   I G+L++W S+KQ V   S+ E EYRA+   
Sbjct: 1343 EQKTIEAYTDADWAGSVTDRRSTSGYCTYIWGNLVTWRSKKQSVXARSSAEAEYRAMAHG 1402

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVRE 522
            + E++WLK +  ++  PL++P+K+ CDN++AI +  NPV H+RTKH+E+  + ++E
Sbjct: 1403 VCEILWLKKILEELKRPLEMPMKLYCDNKAAISIAHNPVQHDRTKHVEIDRHFIKE 1458



 Score = 26.9 bits (58), Expect(2) = 3e-36
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 510  FGSRKLRLGMIDVKYIISNKQLADGLSKVLNSKNFENFLEGLGL 641
            F   KL   +I + ++ + +Q+AD L+K L   +FE  +  LG+
Sbjct: 1455 FIKEKLEASIICMPFVPTTQQIADILTKGLFRSSFEFLISKLGM 1498


>gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1096

 Score =  145 bits (365), Expect(2) = 4e-36
 Identities = 73/176 (41%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            Y++L+G+L YLT T  D+ + V+ + + +H     H  AA RIL+Y+  T+ LGLK  K+
Sbjct: 879  YRSLVGALHYLTLTRPDLSFSVNKVCQYLHAPTTEHWAAAKRILRYLKHTVKLGLKIGKS 938

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
            N L + A+ DA++    D+ +ST G+ + IG +L+SW++RKQ  V+ S+ E EY+AL + 
Sbjct: 939  NSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALENA 998

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVRE 522
             AE+MW++ L  ++ I +    K+ CDN  A  ++ NPVF+ RTKHIEV  + VRE
Sbjct: 999  TAEIMWIQTLLHELGIQVPKTAKVWCDNIGATYMIANPVFYARTKHIEVDYHFVRE 1054



 Score = 33.1 bits (74), Expect(2) = 4e-36
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 537  MIDVKYIISNKQLADGLSKVLNSKNFENFLEGLGLT 644
            ++ V+YI +N Q+ DG +K L  K  E F   L LT
Sbjct: 1060 LLQVEYISTNDQVVDGFTKTLTVKQVEMFRNNLNLT 1095


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  146 bits (368), Expect(2) = 4e-36
 Identities = 74/176 (42%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            Y++L+G+L YLT T  D+ + V+ + + +H +   H  AA RIL+Y+  T+ LGLK +K+
Sbjct: 812  YRSLVGALQYLTLTRPDLSFSVNKVCQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKS 871

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
            N L + A+ DA++    D+ +ST G+ + IG +L+SW++RKQ  V+ S+ E EY+AL + 
Sbjct: 872  NSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANA 931

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVRE 522
             AE+MW++ L  ++ I +    K+ CDN  A  +  NPVFH RTKHIEV  + VRE
Sbjct: 932  TAEIMWIQTLLHELGIQVPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRE 987



 Score = 32.0 bits (71), Expect(2) = 4e-36
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 537  MIDVKYIISNKQLADGLSKVLNSKNFENFLEGLGLT 644
            ++ V+YI +  Q+ADG +K L+ +  E F   L LT
Sbjct: 993  LLQVEYISTKDQVADGFTKTLSVRQLEMFRNNLNLT 1028


>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score =  148 bits (373), Expect(2) = 7e-36
 Identities = 73/176 (41%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYLT T  D+ + VS +++ MH     H     RIL+Y+ +T+  G+   +N
Sbjct: 1133 YQKLVGKLIYLTITRPDISFAVSLVSQYMHAPTVVHLCMVKRILRYLKKTIGRGIVMRRN 1192

Query: 181  NDLSIEAYFDANFGKD--EGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
                I  + D+++  +  + +ST GY + +GG+L+SW S+KQ VV  S+ E EYRA+   
Sbjct: 1193 GHXDIIGFSDSDWAGNTIDRRSTTGYCMFVGGNLVSWKSKKQPVVARSSAEAEYRAMAAA 1252

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVRE 522
              E++WLKNL  D+      P+K+ CDNQ+A+ +  NPVFHERTKHIEV  + +R+
Sbjct: 1253 SCEMVWLKNLLTDLGFSPTSPMKLFCDNQAAMHIAANPVFHERTKHIEVDCHFIRQ 1308



 Score = 29.3 bits (64), Expect(2) = 7e-36
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 510  FGSRKLRLGMIDVKYIISNKQLADGLSKVLNSKNFENFLEGLG 638
            F  ++++  +I   YI S+ QLAD  +KVL+S  F   +  LG
Sbjct: 1305 FIRQQVQSKVIQTHYIRSSDQLADAFTKVLSSTVFHRLMFKLG 1347


>gb|EXB36428.1| hypothetical protein L484_009995 [Morus notabilis]
          Length = 744

 Score =  155 bits (392), Expect = 1e-35
 Identities = 76/177 (42%), Positives = 116/177 (65%), Gaps = 2/177 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYLT+T LD+ Y VS +++ MH   + H +AA RIL Y+   L  G+ F KN
Sbjct: 548  YQRLVGRLIYLTHTRLDIAYSVSVISQFMHDPREPHLQAAHRILHYLKGNLGKGILFKKN 607

Query: 181  NDLSIEAYFDANFGKD--EGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
            + L++EAY DA++     + +ST GY   +GG+LI+W S+KQ VV  S+ E E+R +   
Sbjct: 608  STLTLEAYTDADYAGSIVDRRSTTGYCTFLGGNLITWRSKKQNVVARSSAEAEFRGVAQG 667

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN 525
            + EL+WLK +  D+ +  + P+K+ CD +SAI +  NP+ H+RTKHIE+  + +R +
Sbjct: 668  MCELLWLKIILDDLRVKWEEPMKLYCDKKSAINITHNPIQHDRTKHIEIDRHFIRRS 724


>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711651|gb|ABF99446.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1393

 Score =  155 bits (392), Expect = 1e-35
 Identities = 77/185 (41%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            YQ L+G LIYL +T  D+ Y VS ++R MH     H     +IL+Y+  T   GL F KN
Sbjct: 1171 YQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKN 1230

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
              L++E Y DA++    D+ +ST GY + +GG+L+SW S+KQ VV  ST E EYRA+   
Sbjct: 1231 GHLNVEGYCDADWASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAEYRAMALS 1290

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
            ++E++W+++L  ++ +     + + CDN+SAI +  NPV H+RTKH+E+  + ++E  DS
Sbjct: 1291 LSEMLWMRSLLTELRVLRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFFIKEKIDS 1350

Query: 535  G*LML 549
            G L L
Sbjct: 1351 GVLRL 1355


>gb|ABA93730.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 656

 Score =  155 bits (391), Expect = 1e-35
 Identities = 77/185 (41%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1   YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
           YQ L+G LIYL +T  D+ Y VS ++R MH     H     +IL+Y+  T   GL F KN
Sbjct: 434 YQRLVGRLIYLCHTRPDISYVVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKN 493

Query: 181 NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
             L++E Y DA++    D+ +ST GY + +GG+L+SW S+KQ VV  ST E EYRA+   
Sbjct: 494 GHLNVEGYCDADWASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAEYRAMALS 553

Query: 355 IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
           ++E++W+++L  ++ +     + + CDN+SAI +  NPV H+RTKH+E+  + ++E  DS
Sbjct: 554 LSEMLWMRSLLTELRVLRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFFIKEKIDS 613

Query: 535 G*LML 549
           G L L
Sbjct: 614 GVLRL 618


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  144 bits (364), Expect(2) = 2e-35
 Identities = 74/176 (42%), Positives = 113/176 (64%), Gaps = 2/176 (1%)
 Frame = +1

Query: 1    YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
            Y++L+G+L YLT T  D+ + V+ + + +H     H  AA RIL+Y+  T+ LGLK +K+
Sbjct: 1212 YRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKS 1271

Query: 181  NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
            N L + A+ DA++    D+  ST G+ + IG +L+SW++RKQ  V+ S+ E EY+AL ++
Sbjct: 1272 NSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANV 1331

Query: 355  IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVRE 522
             AE+MW++ L  ++ I      K+ CDN  A  +  NPVFH RTKHIEV  + VRE
Sbjct: 1332 TAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRE 1387



 Score = 31.2 bits (69), Expect(2) = 2e-35
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 540  IDVKYIISNKQLADGLSKVLNSKNFENFLEGLGLT 644
            + V+YI +  Q+ADG +K L+ +  E F   L LT
Sbjct: 1394 LQVEYISTKDQVADGFTKTLSVRQLEMFRNNLNLT 1428


>emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa Japonica Group]
          Length = 343

 Score =  154 bits (389), Expect = 2e-35
 Identities = 76/185 (41%), Positives = 118/185 (63%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1   YQALIGSLIYLTNTSLDMQYPVSSLARVMHKSCKFHTKAATRILQYINETLSLGLKFNKN 180
           YQ L+G LIYL +T  D+ Y VS ++R MH     H     +IL+Y+  T   GL F KN
Sbjct: 121 YQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFMKN 180

Query: 181 NDLSIEAYFDANFGK--DEGKSTIGYLIKIGGDLISWTSRKQKVVT*STIEVEYRALGDL 354
             L++E Y DA++    D+ +ST GY + +GG+L+SW S+KQ VV  ST E EYRA+   
Sbjct: 181 GHLNVEGYCDADWASSMDDRRSTSGYYVFVGGNLVSWRSKKQAVVARSTAEAEYRAMALS 240

Query: 355 IAELMWLKNLY*DIDIPLQLPIKIKCDNQSAIKLLKNPVFHERTKHIEVQAYLVREN*DS 534
           ++E++W+++L+ ++ +     + + CDN+SAI +  NPV H+RTKH+E+  + ++E  +S
Sbjct: 241 LSEMLWMRSLFTELRVLRSDTVMLHCDNRSAISIANNPVQHDRTKHVEIDRFFIKEKINS 300

Query: 535 G*LML 549
           G L L
Sbjct: 301 GVLRL 305