BLASTX nr result
ID: Ephedra25_contig00000839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00000839
(1980 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898... 173 7e-62
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 174 2e-60
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 175 2e-57
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 184 6e-57
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768... 186 2e-56
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana] 186 2e-56
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 186 3e-56
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 195 6e-56
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 192 8e-56
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 192 1e-55
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 192 1e-55
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi... 182 2e-55
ref|XP_003376808.1| retrovirus-related Pol polyprotein from tran... 170 7e-55
pir||S00954 pol polyprotein - fruit fly (Drosophila melanogaster... 155 1e-54
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 174 2e-54
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 165 3e-54
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ... 158 3e-54
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 182 4e-54
gb|AAK12626.1| unknown protein [Aedes aegypti] 167 6e-54
emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera] 157 6e-54
>ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898|gb|EDW75799.1| GK15001
[Drosophila willistoni]
Length = 1249
Score = 173 bits (439), Expect(3) = 7e-62
Identities = 115/390 (29%), Positives = 178/390 (45%), Gaps = 3/390 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ + Y LK K EVF FL+F+ + + G K+ C SDNG + + F ++ K GI
Sbjct: 485 SRRIFVYFLKGKDEVFGKFLEFKSLVERQTGKKLKCIRSDNGREYVNNAFDDYLKKNGIL 544
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ + Y PQ N VAER NRTLVEM R LL S L W E+ TA Y+ N P +L
Sbjct: 545 RQLTIAYTPQQNGVAERANRTLVEMSRCLLAQSGLCEALWAEAIFTAVYLRNRSPTSALT 604
Query: 1168 CITPFQICSFK-PSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP + + K P I+HL+VF + Q K PK + M+GY+ E+KGY++ D
Sbjct: 605 NQTPMEAWTGKKPCINHLKVFGSVAVALSKGHQESKFRPKGKEYRMVGYSREAKGYRLYD 664
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
ETRK++ RDV F E + ++ T+ F++ Y +N + + + ++ +
Sbjct: 665 GETRKVVERRDVLFDERD-----PIEQTNCTTVMFDLPGRYRQNEIADANPEINESESDA 719
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
S + + +D + P++ + + G P
Sbjct: 720 SEGQSAESDADEESFHSAPEEKLAQDESEMRVGPGRPRVI-------------------- 759
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNIA--EIPNPKGPKNIKDALANHNWKEVMDKEI 1878
TGK GR +K L +I E+P P ++ W+E MDKE
Sbjct: 760 -RTGKP----------GRPRKQYNILASIVAGEVPTPSTYEDAISGPYASQWQEAMDKEF 808
Query: 1879 QMLSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
L TWEL + GC+ V+++K
Sbjct: 809 GALVKNQTWELIDLTNKQRTIGCKWVFSLK 838
Score = 71.2 bits (173), Expect(3) = 7e-62
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Frame = +3
Query: 408 HFKKKMEKLVAKSLTTRK*LLKEPNKTGYL------S*NLC**CFLTNTELSNLWHNRLG 569
HF+K M K++ K K G L S NL F E +LWH R G
Sbjct: 350 HFEKHMAKIIQNGECILK-----AKKIGNLFVFEAESENL----FAAVGEDVSLWHKRFG 400
Query: 570 HINNKSLSKVEA-AVSHGLK--NFLPTKTCSS*IIAKLHKKPFRSSTIS-STRCLEIIHF 737
H+N KSL+++ + + GL NF P C + +++K+H +PF T S S+ L+++H
Sbjct: 401 HLNYKSLTQIASKGLVRGLSVTNFAPNTPCKTCMVSKIHVQPFPKMTESRSSELLQLVHS 460
Query: 738 DLCGPITPTTMQ*KRYILTFSND 806
D+CGP ++ RY LTF +D
Sbjct: 461 DVCGPFGTKSLGGSRYFLTFIDD 483
Score = 43.1 bits (100), Expect(3) = 7e-62
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = +2
Query: 155 WFLDSGCNSHMTSDKDCFTNLKISNNGKFVKTTGDDRLPLKGYGDIILNFGTNTITLTDA 334
W LDSG SHM DK F++ + + + G L +G G + + G +T+ +
Sbjct: 269 WCLDSGATSHMCCDKSMFSDFSVHDEKISLADAG--YLRAEGKGKVTIRTGICKLTMNNV 326
Query: 335 LYVKGLQKYLISLYKLL 385
LYV GL +S+ +++
Sbjct: 327 LYVPGLAGNFMSVARVI 343
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 174 bits (442), Expect(3) = 2e-60
Identities = 123/390 (31%), Positives = 183/390 (46%), Gaps = 1/390 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ +W Y LK KSE FE F KF+ + + G+KI +D G F S +F FC + GI+
Sbjct: 533 SRFSWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIR 592
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+E+ PY P+ N VAERKNRT+VEM RS L++ L +WGE+ T Y LN+ P + +
Sbjct: 593 RELTAPYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVW 652
Query: 1168 CITPFQICS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP + + KP +SHLR+F C + KLD K+ K I +GY+ +SK Y++ +
Sbjct: 653 NTTPLEAWNGKKPRVSHLRIFG--CIAYALVNFHSKLDEKSTKCIFVGYSLQSKAYRLYN 710
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
+ K+I SR+V F ED + + S N + N +E D N
Sbjct: 711 PISGKVIISRNVVFNEDVSWNFN--------------SGNMMSNIQLLPTDEESAVDFGN 756
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
S +S+ SS SS P+T + ++++ P+PL + T E
Sbjct: 757 SPNSSPVSSSVSSP--------------------IAPSTTVAPDESSVEPIPL-RRSTRE 795
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKEIQM 1884
Y C A + + P ++A+ WK M +EIQ
Sbjct: 796 KKPNPKYSNTV------------NTSCQFALLVS--DPICYEEAVEQSEWKNAMIEEIQA 841
Query: 1885 LSNRYTWELRKPPIDKEVTGCRRVYNIKYH 1974
+ TWEL P K V G + V+ KY+
Sbjct: 842 IERNSTWELVDAPEGKNVIGLKWVFRTKYN 871
Score = 58.9 bits (141), Expect(3) = 2e-60
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +3
Query: 543 SNLWHNRLGHINNKSLSK-VEAAVSHGLKNFLPTKTCSS*IIAKLHKKPFR-SSTISSTR 716
+NLWH R GH+N L V+ + GL N C I K +K F + +T
Sbjct: 442 TNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELDLCEGCIYGKQTRKSFPVGKSWRATT 501
Query: 717 CLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
CLE++H DLCGP+ ++ RY L F++D+
Sbjct: 502 CLELVHADLCGPMKMESLGGSRYFLMFTDDY 532
Score = 49.7 bits (117), Expect(3) = 2e-60
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Frame = +2
Query: 65 QNPKNKKANLAK-IKDHIYIFYTNKDYN---NVGWFLDSGCNSHMTSDKDCFTNLKISNN 232
Q + K AN + +++ +F + N WF+DSGC++HM+S K F +L S
Sbjct: 277 QKDEQKDANFTQNVEEESKLFMASSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQK 336
Query: 233 GKFVKTTGDDRLPLKGYGDI-ILNFGTNTITLTDALYVKGLQKYLISLYKLLSQRYYMRA 409
+ V+ D ++ ++G G + I N L D YV L L+S+ +L++ Y +
Sbjct: 337 SE-VRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVF 395
Query: 410 F-------QKENGET 433
+ KE+G T
Sbjct: 396 YDNACDIKDKESGRT 410
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 175 bits (443), Expect(3) = 2e-57
Identities = 112/332 (33%), Positives = 175/332 (52%), Gaps = 12/332 (3%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ TW Y LK KSE FE F KF+ + +I SD G +TST F +C ++GI+
Sbjct: 578 SRKTWVYFLKEKSEAFEVFKKFKVMVERTTDKQIKAVRSDRGGEYTSTTFMEYCEEQGIR 637
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+ + PY PQ N VAERKNRT+++MVRS+L+S ++ ++W E+ A Y+ N P LD
Sbjct: 638 RFLTAPYTPQQNGVAERKNRTILDMVRSMLKSKKMPKEFWAEAVQCAIYVQNRCPHVKLD 697
Query: 1168 CITPFQICS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP + S KP++SHL+VF + + H+P ++R KL+ K+ + + IGY+E++KGYK+LD
Sbjct: 698 DQTPQEAWSGQKPTVSHLKVFGSVAYAHVPDQRRTKLEDKSKRYVFIGYDEKTKGYKLLD 757
Query: 1345 EETRKLIFSRDVKFVE------DNIPHISHSQKETYPT-IQFEMSDNYVENTTRNEHKKE 1503
++K+ SRDV+ E +N + E+ PT I E +D+ E
Sbjct: 758 PISKKVTVSRDVQINEASEWDWNNSSEVMIEVGESSPTSINSETTDDEDEPRQPKIRSLH 817
Query: 1504 DKQDPQNSLHSTG--QQSSDSSTKQPEPQKSINSNNDRTSKG-*REPTTELINNDAASHP 1674
D D N +H + + S ++ K + D K R T EL S P
Sbjct: 818 DLYDSTNEVHLVCLLADAENISFEEAVRDKKWQTAMDEEIKAIDRNNTWELTELPEGSQP 877
Query: 1675 LPL-WAKKTLEDNTGKVYKGYYGYLTRGRKKK 1767
+ + W K + G++ + + +G K+K
Sbjct: 878 IGVKWIFKKKMNAQGEIERYKARLVAKGYKQK 909
Score = 62.8 bits (151), Expect(3) = 2e-57
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Frame = +3
Query: 519 CFLTNTE-LSNLWHNRLGHINNKSLSKV-EAAVSHGLKNF-LPTKTCSS*IIAKLHKKPF 689
C N E ++LWH R GH+++ L ++ + + HGL N K C +++K + F
Sbjct: 477 CLQVNIEDKASLWHLRFGHLHHGGLKELAKKNMVHGLPNMDYEGKFCEECVLSKHVRTSF 536
Query: 690 -RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
+ + + + LE+IH D+CGPITP + KRY +TF +DF
Sbjct: 537 PKKAQYWAKQPLELIHTDICGPITPESFSGKRYFITFIDDF 577
Score = 35.0 bits (79), Expect(3) = 2e-57
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 143 NNVGWFLDSGCNSHMTSDKDCFTNLKISNNGKFVKTTGDDRLPLKGYGDIILNFGTNTI- 319
N+ W+LDSG ++HM + F +++ +G V ++ +KG G + I
Sbjct: 352 NDTLWYLDSGASNHMCGHEYLFKDMQKIEDG-HVSFGDASKVEVKGRGTVCYLQKDGLIG 410
Query: 320 TLTDALYVKGLQKYLISLYKLLSQRY 397
+L D YV L+ ++S+ +L + Y
Sbjct: 411 SLQDVYYVPDLKTNILSMGQLTEKGY 436
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 184 bits (466), Expect(3) = 6e-57
Identities = 120/395 (30%), Positives = 193/395 (48%), Gaps = 4/395 (1%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
++M W Y LK KS E F KF+ + + KI SD G + S EF+ +C GI+
Sbjct: 547 TRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGREYISKEFEKYCENAGIR 606
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ Y+ Q N VAERKNRT+ +M S+LQ + +W E+ TA YILN P +++
Sbjct: 607 RQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVT 666
Query: 1168 CITPFQI-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TPF+ KP I H+RVF +C+ +P ++R K D K+++ I +GY + KGY++ +
Sbjct: 667 NRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYN 726
Query: 1345 EETRKLIFSRDVKFVED---NIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQD 1515
E +K+I SRD F E N S PT + ++ T H+ ED
Sbjct: 727 LEKKKIIISRDAIFDESATWNWKSPEASSTPLLPTTTITLGQPHMHGT----HEVED--- 779
Query: 1516 PQNSLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKK 1695
T P+P ++S++ + P++E + S P + +
Sbjct: 780 ---------------HTPSPQPSSPMSSSSASSDS---SPSSEEQISTPESAPRRVRSMV 821
Query: 1696 TLEDNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKE 1875
L ++T ++ R + EF CN + + P++ ++A + NW + M+ E
Sbjct: 822 ELLEST-----------SQQRGSEQHEF-CNYSVVE----PQSFQEAEKHDNWIKAMEDE 865
Query: 1876 IQMLSNRYTWELRKPPIDKEVTGCRRVYNIKYHPN 1980
I M+ TWEL P D+EV G + VY K +P+
Sbjct: 866 IHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNPD 900
Score = 43.9 bits (102), Expect(3) = 6e-57
Identities = 27/110 (24%), Positives = 50/110 (45%)
Frame = +2
Query: 68 NPKNKKANLAKIKDHIYIFYTNKDYNNVGWFLDSGCNSHMTSDKDCFTNLKISNNGKFVK 247
N N K ++ ++ +T ++ + W +DSGC +HM +D + F + S + K
Sbjct: 297 NRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHM 356
Query: 248 TTGDDRLPLKGYGDIILNFGTNTITLTDALYVKGLQKYLISLYKLLSQRY 397
G +G G + + + D L V L++ L+S+ +LL Y
Sbjct: 357 GNG-SIAQSEGKGTVAVQTADGPKFIKDVLLVPDLKQNLLSIGQLLEHGY 405
Score = 43.5 bits (101), Expect(3) = 6e-57
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Frame = +3
Query: 417 KKMEKLVAK-SLTTRK*LLKEPNKTGYLS*NLC**CFLTNTELSNLWHNRLGHINNKSLS 593
+K +LVAK ++ + L N T ++ + ++S+LWH R+GH+N ++L
Sbjct: 419 RKNNRLVAKINMEKNRNFLLRMNHTTQMA-------LRSEVDISDLWHKRMGHLNYRALK 471
Query: 594 KVEAAVSHGLKNFLPTKT-----CSS*IIAKLHKKPF-RSSTISSTRCLEIIHFDLCGPI 755
+ + G+ LP T C + K + F S ++ LE++H D+ G +
Sbjct: 472 LLR---TKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHADIVGKV 528
Query: 756 TPTTMQ*KRYILTFSNDF 809
+ Y +TF +D+
Sbjct: 529 PTISEGGNWYFITFIDDY 546
>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
Length = 1334
Score = 186 bits (473), Expect(2) = 2e-56
Identities = 115/394 (29%), Positives = 197/394 (50%), Gaps = 5/394 (1%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ WTY+L KSE F+ F +F+ + + E G K+ C SD G + S EF +C + GIK
Sbjct: 526 SRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIK 585
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ Y PQ N VAERKNR+++ M R +L + K+W E+ A YILN P ++L+
Sbjct: 586 RQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALN 645
Query: 1168 CITPFQ-ICSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
ITP + S+KPS+ HLR+F L + +P ++R KLD K+ K +M G ++ESK Y++ D
Sbjct: 646 DITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYD 705
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENT---TRNEHKKEDKQD 1515
T K++ SRDV+F E+ +E D +E ++H+ ++
Sbjct: 706 PATGKILISRDVQFDEER---------------GWEWEDKSLEEELVWDNSDHEPAGEEG 750
Query: 1516 PQNSLHSTGQQSSDSSTKQPEP-QKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAK 1692
P+ ++ GQQ + + ++ E ++++ N G P+W K
Sbjct: 751 PE--INHNGQQDQEETEEEEETVAETVHQNLPAVGTG-----------GVRQRQQPVWMK 797
Query: 1693 KTLEDNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDK 1872
+ N + +T+ + + +A P P ++A W++ M+
Sbjct: 798 DYVVGNARVL-------ITQDEEDE------VLALFIGPDDPVCFEEAAQLEVWRKAMEA 844
Query: 1873 EIQMLSNRYTWELRKPPIDKEVTGCRRVYNIKYH 1974
EI + TWEL + P + +V G + ++ K++
Sbjct: 845 EITSIEENNTWELVELPEEAKVIGLKWIFKTKFN 878
Score = 62.0 bits (149), Expect(2) = 2e-56
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +3
Query: 519 CFLTNTELSNLWHNRLGHINNKSL-SKVEAAVSHGLKNF---LPTKTCSS*IIAKLHKKP 686
C + +N+WH R GH+N++ L S E + GL F C + K ++
Sbjct: 424 CLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRES 483
Query: 687 F-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
+ S ST+ L+++H D+CGPI P + KRYIL F +DF
Sbjct: 484 IPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDF 525
>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
Length = 1207
Score = 186 bits (473), Expect(2) = 2e-56
Identities = 115/394 (29%), Positives = 197/394 (50%), Gaps = 5/394 (1%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ WTY+L KSE F+ F +F+ + + E G K+ C SD G + S EF +C + GIK
Sbjct: 431 SRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIK 490
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ Y PQ N VAERKNR+++ M R +L + K+W E+ A YILN P ++L+
Sbjct: 491 RQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALN 550
Query: 1168 CITPFQ-ICSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
ITP + S+KPS+ HLR+F L + +P ++R KLD K+ K +M G ++ESK Y++ D
Sbjct: 551 DITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYD 610
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENT---TRNEHKKEDKQD 1515
T K++ SRDV+F E+ +E D +E ++H+ ++
Sbjct: 611 PATGKILISRDVQFDEER---------------GWEWEDKSLEEELVWDNSDHEPAGEEG 655
Query: 1516 PQNSLHSTGQQSSDSSTKQPEP-QKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAK 1692
P+ ++ GQQ + + ++ E ++++ N G P+W K
Sbjct: 656 PE--INHNGQQDQEETEEEEETVAETVHQNLPAVGTG-----------GVRQRQQPVWMK 702
Query: 1693 KTLEDNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDK 1872
+ N + +T+ + + +A P P ++A W++ M+
Sbjct: 703 DYVVGNARVL-------ITQDEEDE------VLALFIGPDDPVCFEEAAQLEVWRKAMEA 749
Query: 1873 EIQMLSNRYTWELRKPPIDKEVTGCRRVYNIKYH 1974
EI + TWEL + P + +V G + ++ K++
Sbjct: 750 EITSIEENNTWELVELPEEAKVIGLKWIFKTKFN 783
Score = 62.0 bits (149), Expect(2) = 2e-56
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +3
Query: 519 CFLTNTELSNLWHNRLGHINNKSL-SKVEAAVSHGLKNF---LPTKTCSS*IIAKLHKKP 686
C + +N+WH R GH+N++ L S E + GL F C + K ++
Sbjct: 329 CLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRES 388
Query: 687 F-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
+ S ST+ L+++H D+CGPI P + KRYIL F +DF
Sbjct: 389 IPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDF 430
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 186 bits (472), Expect(2) = 3e-56
Identities = 115/394 (29%), Positives = 197/394 (50%), Gaps = 5/394 (1%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ WTY+L KSE F+ F +F+ + + E G K+ C SD G + S EF +C + GIK
Sbjct: 526 SRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIK 585
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ Y PQ N VAERKNR+++ M R +L + K+W E+ A YILN P ++L+
Sbjct: 586 RQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALN 645
Query: 1168 CITPFQ-ICSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
ITP + S+KPS+ HLR+F L + +P ++R KLD K+ K +M G ++ESK Y++ D
Sbjct: 646 DITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYD 705
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENT---TRNEHKKEDKQD 1515
T K++ SRDV+F E+ +E D +E ++H+ ++
Sbjct: 706 PATGKILISRDVQFDEER---------------GWEWEDKSLEEELVWDNSDHEPAGEEG 750
Query: 1516 PQNSLHSTGQQSSDSSTKQPEP-QKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAK 1692
P+ ++ GQQ + + ++ E ++++ N G P+W K
Sbjct: 751 PE--INHNGQQDQEETEEEEETVAETVHQNLPAVGTG-----------GVRQRQQPVWMK 797
Query: 1693 KTLEDNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDK 1872
+ N + +T+ + + +A P P ++A W++ M+
Sbjct: 798 DYVVGNARVL-------ITQDEEDE------VLALFIGPGDPVCFEEAAQLEVWRKAMEA 844
Query: 1873 EIQMLSNRYTWELRKPPIDKEVTGCRRVYNIKYH 1974
EI + TWEL + P + +V G + ++ K++
Sbjct: 845 EITSIEENNTWELVELPEEAKVIGLKWIFKTKFN 878
Score = 62.0 bits (149), Expect(2) = 3e-56
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +3
Query: 519 CFLTNTELSNLWHNRLGHINNKSL-SKVEAAVSHGLKNF---LPTKTCSS*IIAKLHKKP 686
C + +N+WH R GH+N++ L S E + GL F C + K ++
Sbjct: 424 CLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRES 483
Query: 687 F-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
+ S ST+ L+++H D+CGPI P + KRYIL F +DF
Sbjct: 484 IPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDF 525
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 195 bits (496), Expect(2) = 6e-56
Identities = 127/388 (32%), Positives = 191/388 (49%), Gaps = 1/388 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ TW Y LK KSEVFE F KF+ + E G I SD+G FTS EF +C GI+
Sbjct: 557 SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIR 616
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ VP +PQ N VAERKNRT++EM RS+L+S +L + W E+ A Y+LN P +S+
Sbjct: 617 RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676
Query: 1168 CITPFQICS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP + S KP +SHLRVF + H+P E+R KLD K+ K I IGY+ SKGYK+ +
Sbjct: 677 GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYN 736
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
+T+K I SR++ F E+ +++ + N E+ H +EDK +P
Sbjct: 737 PDTKKTIISRNIVFDEEG---------------EWDWNSN-EEDYNFFPHFEEDKPEP-- 778
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
T++ P + EPTT + P +++
Sbjct: 779 -------------TREEPPSE--------------EPTT------PPTSPTSSQIEESSS 805
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKEIQM 1884
+ T + ++ ++ C AE P + ++A+ W+ MD+EI+
Sbjct: 806 ERTPR-FRSIQELYEVTENQENLTLFCLFAECE----PMDFQEAIEKKTWRNAMDEEIKS 860
Query: 1885 LSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
+ TWEL P + G + VY K
Sbjct: 861 IQKNDTWELTSLPNGHKAIGVKWVYKAK 888
Score = 51.6 bits (122), Expect(2) = 6e-56
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Frame = +3
Query: 537 ELSNLWHNRLGHIN--------NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPF- 689
E S LWH R GH+N K + + ++H P + C ++ K F
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINH------PNQVCEGCLLGNQFKMSFP 516
Query: 690 RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
+ S+ + + LE+IH D+CGPI P ++ Y L F +DF
Sbjct: 517 KESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 192 bits (488), Expect(2) = 8e-56
Identities = 126/388 (32%), Positives = 185/388 (47%), Gaps = 1/388 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ TW Y LK KSEVFE F KF+ + E G I SD G FTS EF +C GI+
Sbjct: 557 SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ VP +PQ N VAERKNRT++EM RS+L+S +L + W E+ A Y+LN P +S+
Sbjct: 617 RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676
Query: 1168 CITPFQICSFKPS-ISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP + S + S +SHLRVF + H+P E+R KLD K+ K I IGY+ SKGYK+ +
Sbjct: 677 GKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
+T+K I SR++ F E+ + ++++ FE + TR E E+ P
Sbjct: 737 PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE---PEPTREEPPSEEPTTPPT 793
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
S T Q +SS+++ +SI + T
Sbjct: 794 S--PTSSQIEESSSERTPRFRSIQELYEVT------------------------------ 821
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKEIQM 1884
++ C AE P + ++A+ W+ MD+EI+
Sbjct: 822 -----------------ENQENLTLFCLFAECE----PMDFQEAIEKKTWRNAMDEEIKS 860
Query: 1885 LSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
+ TWEL P + G + VY K
Sbjct: 861 IQKNDTWELTSLPNGHKTIGVKWVYKAK 888
Score = 54.3 bits (129), Expect(2) = 8e-56
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Frame = +3
Query: 537 ELSNLWHNRLGHIN--------NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPF- 689
E S LWH R GH+N K + + ++H P + C ++ K K F
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINH------PNQVCEGCLLGKQFKMSFP 516
Query: 690 RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
+ S+ + + LE+IH D+CGPI P ++ Y L F +DF
Sbjct: 517 KESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 192 bits (488), Expect(2) = 1e-55
Identities = 126/388 (32%), Positives = 183/388 (47%), Gaps = 1/388 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ TW Y LK KSEVFE F KF+ + E G I SD G FTS EF +C GI+
Sbjct: 557 SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ VP +PQ N V ERKNRT++EM RS+L+S +L + W E+ A Y+LN P +S+
Sbjct: 617 RQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676
Query: 1168 CITPFQICS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP + S KP +SHLRVF + H+P E+R KLD K+ K I IGY+ SKGYK+ +
Sbjct: 677 GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
+T+K I SR++ F E+ + ++++ FE + TR E E+ P
Sbjct: 737 PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE---PEPTREEPPSEEPTTPPT 793
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
S T Q +SS+++ +SI + T
Sbjct: 794 S--PTSSQIEESSSERTPRFRSIQELYEVT------------------------------ 821
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKEIQM 1884
++ C AE P + + A+ W+ MD+EI+
Sbjct: 822 -----------------ENQENLTLFCLFAECE----PMDFQKAIEKKTWRNAMDEEIKS 860
Query: 1885 LSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
+ TWEL P + G + VY K
Sbjct: 861 IQKNDTWELTSLPNGHKAIGVKWVYKAK 888
Score = 53.5 bits (127), Expect(2) = 1e-55
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Frame = +3
Query: 537 ELSNLWHNRLGHIN--------NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPF- 689
E S LWH R GH+N K + + ++H P + C ++ K K F
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINH------PNQVCEGCLLGKQFKMSFP 516
Query: 690 RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
+ S+ + + LE+IH D+CGPI P ++ Y L F +DF
Sbjct: 517 KESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 192 bits (488), Expect(2) = 1e-55
Identities = 126/388 (32%), Positives = 183/388 (47%), Gaps = 1/388 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ TW Y LK KSEVFE F KF+ + E G I SD G FTS EF +C GI+
Sbjct: 557 SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ VP +PQ N V ERKNRT++EM RS+L+S +L + W E+ A Y+LN P +S+
Sbjct: 617 RQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676
Query: 1168 CITPFQICS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP + S KP +SHLRVF + H+P E+R KLD K+ K I IGY+ SKGYK+ +
Sbjct: 677 GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
+T+K I SR++ F E+ + ++++ FE + TR E E+ P
Sbjct: 737 PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE---PEPTREEPPSEEPTTPPT 793
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
S T Q +SS+++ +SI + T
Sbjct: 794 S--PTSSQIEESSSERTPRFRSIQELYEVT------------------------------ 821
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKEIQM 1884
++ C AE P + + A+ W+ MD+EI+
Sbjct: 822 -----------------ENQENLTLFCLFAECE----PMDFQKAIEKKTWRNAMDEEIKS 860
Query: 1885 LSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
+ TWEL P + G + VY K
Sbjct: 861 IQKNDTWELTSLPNGHKAIGVKWVYKAK 888
Score = 53.5 bits (127), Expect(2) = 1e-55
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Frame = +3
Query: 537 ELSNLWHNRLGHIN--------NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPF- 689
E S LWH R GH+N K + + ++H P + C ++ K K F
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINH------PNQVCEGCLLGKQFKMSFP 516
Query: 690 RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
+ S+ + + LE+IH D+CGPI P ++ Y L F +DF
Sbjct: 517 KESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556
>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1347
Score = 182 bits (461), Expect(2) = 2e-55
Identities = 129/389 (33%), Positives = 191/389 (49%), Gaps = 4/389 (1%)
Frame = +1
Query: 814 MTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIKKE 993
M W Y LK KSE F F KF KA +EK S CS T + FC +GI ++
Sbjct: 547 MCWVYFLKQKSETFATFKKF--KALVEKQSN----CSIK----TLRPMEVFCEDEGINRQ 596
Query: 994 VAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSL-DC 1170
V +PY+PQ N AERKNR+LVEM RS+L L K W E+ T+ Y+ N LP +++ D
Sbjct: 597 VTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDD 656
Query: 1171 ITPFQI-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILDE 1347
+TP + C KP++SHLR+F +C+ HIP ++R KLD KA I+IGY+ ++KGY++
Sbjct: 657 VTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLL 716
Query: 1348 ETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQNS 1527
E K+ SRDV F ED Q+E T F MS N ++ E + + S
Sbjct: 717 EDEKVEVSRDVVFQEDK-KWDWDKQEEVKKT--FVMSINDIQ---------ESRDQQETS 764
Query: 1528 LHSTGQQSSDSSTKQPEPQKSINSN-NDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
H Q ++ + E + S ND+ + T+E
Sbjct: 765 SHDLSQIDDHANNGEGETSSHVLSQVNDQEER----ETSE-------------------- 800
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNI-AEIPNPKGPKNIKDALANHNWKEVMDKEIQ 1881
+ K YK L + + + +E I A + + P+ +A + W+E M++EI+
Sbjct: 801 --SPKKYKSMKEILEKAPRMENDEAAQGIEACLVANEEPQTYDEARGDKEWEEAMNEEIK 858
Query: 1882 MLSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
++ TW+L P K V + +Y IK
Sbjct: 859 VIEKNRTWKLVDKPEKKNVISVKWIYKIK 887
Score = 63.2 bits (152), Expect(2) = 2e-55
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Frame = +3
Query: 531 NTELSNLWHNRLGHINNKSLSKVE-AAVSHGLKNFLPTK-TCSS*IIAKLHKKPFRSSTI 704
N + WH RLGH++NK L +++ + +GL F TK TC + + K +K F +
Sbjct: 449 NVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKETCKACNLGKQSRKSFPKESQ 508
Query: 705 SSTR-CLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
+ TR LEI+H D+CGP+ ++ RY + F +D+
Sbjct: 509 TKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDY 544
>ref|XP_003376808.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella spiralis] gi|316974460|gb|EFV57947.1|
retrovirus-related Pol polyprotein from transposon TNT
1-94 [Trichinella spiralis]
Length = 1324
Score = 170 bits (430), Expect(3) = 7e-55
Identities = 99/289 (34%), Positives = 153/289 (52%), Gaps = 5/289 (1%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ ++ Y LKHK+EV F F + + ++ C +DNG + + F F ++KGI+
Sbjct: 512 SRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVRKGIR 571
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
E +P PQ N VAER NRTLVE R++L + LS W E+ TA Y+ N P ++L
Sbjct: 572 HERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALR 631
Query: 1168 CITPFQICS-FKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
+TP + S KP+++HL+VF L H+P QR K DPK+ + I +GY E SKGY+ +D
Sbjct: 632 KVTPEEAWSGRKPNLAHLKVFGCLAMVHVPSGQRKKWDPKSEERIFVGYCETSKGYRTVD 691
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTT---RNEHKKEDKQD 1515
+T+K+ +RDVKF+E P S++ + ++ M+ + E T ++ + D
Sbjct: 692 RKTKKMYVTRDVKFLESQFPGTQASKEGSTNSL---MNPDVGEETVIVWTSQDSGSTEMD 748
Query: 1516 PQNSLHSTGQQSSDSSTKQ-PEPQKSINSNNDRTSKG*REPTTELINND 1659
P + SD S Q P+P + R R P + N+D
Sbjct: 749 PNPTAPLKVDTDSDKSIGQNPQPSTKTSPEELRRPLRNRFPNRNIFNSD 797
Score = 62.4 bits (150), Expect(3) = 7e-55
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Frame = +3
Query: 504 NLC**CFLTNTELSNLWHNRLGHINNKSLSKVEAAVSHGLKNFLPTKT-CSS*IIAKLHK 680
N C +T ++ +LWH RLGH++ S+ ++ + G+ + TKT C + + K +
Sbjct: 408 NRCDQWAMTVHDVPDLWHRRLGHLSRGSMKLLQDGQATGIPSDAITKTDCVTCLKGKQCR 467
Query: 681 KPF-RSSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
PF +S+T S LE++H D+CGP+ ++ RY L+F +DF
Sbjct: 468 LPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDF 511
Score = 32.0 bits (71), Expect(3) = 7e-55
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Frame = +2
Query: 155 WFLDSGCNSHMTSDKDCFTNLKISNNGKFVKTTGDDRLPLKGYGDIILNFGT-NTITLTD 331
WFLDSG +H+T D + V + KG G + + T T+ D
Sbjct: 291 WFLDSGATTHLTHRDDWMEEYN-GHTTHTVAIANGTNITTKGCGVVKIPLATKKTMVAHD 349
Query: 332 ALYVKGLQKYLISLYKLLSQRYYMRAFQKENGETCC*ISY---YQKIVAKGTEQNGLF 496
+ L L+S+ ++ +Q+ + ENG ++ Q I+ T+ NGL+
Sbjct: 350 VRHAPELALNLLSVSRIAAQKKTL--IFDENGCRIVDLAIEVPRQHILGTATQYNGLY 405
>pir||S00954 pol polyprotein - fruit fly (Drosophila melanogaster) transposon 1731
gi|8702|emb|CAA30503.1| unnamed protein product
[Drosophila melanogaster]
Length = 982
Score = 155 bits (392), Expect(3) = 1e-54
Identities = 116/390 (29%), Positives = 181/390 (46%), Gaps = 3/390 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ + Y L+ K EVF F++F+K + + G KI C SDNG F + F ++ GI
Sbjct: 229 SRRIFVYFLRKKDEVFTKFVEFKKLVERQTGRKIKCIRSDNGGEFVNNVFDDYLKAHGIA 288
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+++ +P+ PQ N VAER NRTLVEM R +L S+L W E+ TA Y+ N R+L
Sbjct: 289 RQLTIPHTPQQNGVAERANRTLVEMARCMLLQSELGEALWAEAINTAVYLRNRSTSRALQ 348
Query: 1168 CITPFQICSFK-PSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP + + K P++SHLRVF + +GK + K + MIGY+ +KGY++ D
Sbjct: 349 SKTPMEEWTGKIPAVSHLRVFGAIAVALDKGVHKGKFESKGKEYRMIGYSIAAKGYRLFD 408
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
+E R +I +DV F E ++H NT + D +PQ
Sbjct: 409 KEKRCVIEKQDVLFDESG-SLVNHG------------------NTIEFQFPATDDPEPQ- 448
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
SDS+ ++ + + + S++D S E +A H P K
Sbjct: 449 ---------SDSNAREGDDTEPVGSSDDYESAAEAE--------EAEVHVGPGRPKIV-- 489
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFL--CNIAEIPNPKGPKNIKDALANHNWKEVMDKEI 1878
TG+ GR KK L +++ PK + ++ + W+E M E
Sbjct: 490 -RTGR----------PGRPKKQYNVLGVLMASDVEIPKSYEEAINSQYSAKWEEAMGLEY 538
Query: 1879 QMLSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
+ L TW+L P ++ C+ VY++K
Sbjct: 539 KALLANETWKLADLPRNRRCVACKWVYSLK 568
Score = 67.8 bits (164), Expect(3) = 1e-54
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +3
Query: 519 CFLTNTELSNLWHNRLGHINNKSLSK-VEAAVSHGLKN--FLPTKTCSS*IIAKLHKKPF 689
CF +LWH R GH+N SL + V + +G++ F P C + ++AK+H +PF
Sbjct: 128 CFAAVDADGSLWHKRNGHLNTSSLQEMVRKKMVYGVEKVVFKPDAVCKTCMLAKIHVQPF 187
Query: 690 RSSTIS-STRCLEIIHFDLCGPITPTTMQ*KRYILTFSND 806
+T S + L++IH DLCGP + ++ +Y LTF +D
Sbjct: 188 PKTTRSRAEELLDMIHSDLCGPFSTPSLAGSKYFLTFIDD 227
Score = 40.4 bits (93), Expect(3) = 1e-54
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +2
Query: 140 YNNVGWFLDSGCNSHMTSDKDCFTNLKISNNGKFVKTTGDDRLPLKGYGDIILNFGTNTI 319
+ W LDSG SHM D+ FT + + + + G+ L KG G + L T+
Sbjct: 8 FGKTQWCLDSGATSHMCCDRSVFT--EFEEHTEKISLAGNGFLLAKGIGTVKLKTDLCTL 65
Query: 320 TLTDALYVKGLQKYLISLYKLLSQRYYM 403
L + L+V L +S+ + + ++
Sbjct: 66 VLNNVLFVPDLNGNFMSVSRAAQYKCFV 93
>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 174 bits (440), Expect(2) = 2e-54
Identities = 116/389 (29%), Positives = 186/389 (47%), Gaps = 1/389 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+M+W Y L+ K+E FE F KF+ + + G I +D G F S +FK FC ++G+
Sbjct: 462 SRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLH 521
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+E+ PY+P+ N VAERKNRT+VEM RS++++ LS +W E TA Y+LN+ P +++
Sbjct: 522 RELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVL 581
Query: 1168 CITPFQI-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP++ KP +SHL+VF + + I R KLD K+ K I IGY +SKGYK+ +
Sbjct: 582 NRTPYEAWYGKKPWVSHLKVFGSVAYTLIESHNRSKLDEKSVKCIFIGYCSQSKGYKLYN 641
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
+ K+I SR+V F +K ++ T + VE ++ +E + + Q P
Sbjct: 642 PVSGKIIVSRNVVF----------DEKASW-TWRVSEDGALVEISSESEVAQSEDQQPSV 690
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
+ ++ P P S +S N +S ++ +S P ++L
Sbjct: 691 QIPAS-----------PTPSHSPSSPNLSSS-----------SSSQSSEETPPRKFRSLR 728
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKEIQM 1884
D + ++ P ++A+ W M +EI
Sbjct: 729 D------------------------IYETTQVLFVADPTTFEEAVEKEEWXSAMKEEIAA 764
Query: 1885 LSNRYTWELRKPPIDKEVTGCRRVYNIKY 1971
+ TWEL + P DK V G + V+ Y
Sbjct: 765 IEKNETWELVELPEDKNVIGVKWVFXTXY 793
Score = 67.8 bits (164), Expect(2) = 2e-54
Identities = 42/95 (44%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Frame = +3
Query: 534 TELSNLWHNRLGHINNKSLSKV-EAAVSHGLKNFLPTKTCSS*IIAKLHKKPF---RSST 701
T SNLWH R GH+N K L + + + GL C I K KKPF RS
Sbjct: 368 TSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRR 427
Query: 702 ISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSND 806
SS CLEIIH DLCGP+ + RY L F+ND
Sbjct: 428 ASS--CLEIIHADLCGPMQTASFGGSRYFLLFTND 460
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 165 bits (417), Expect(3) = 3e-54
Identities = 128/425 (30%), Positives = 188/425 (44%), Gaps = 34/425 (8%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ TW Y++ HKSE + F + GS++ SDNG F T+F + +GI
Sbjct: 615 SRSTWVYLMHHKSEARSLLVHFVNLVANQFGSQVKIVRSDNGPEFKHTQFYS---SRGIL 671
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+ + PQ N V ERK+R L+ + R+LL S L +WG++ LTA Y++N P L
Sbjct: 672 HQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQ 731
Query: 1168 CITPFQICSFK-PSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TPF+ K P+ SHLRVF CF + K DP++ +S+ IGY KGYK+
Sbjct: 732 GKTPFEKLFHKSPNYSHLRVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYS 791
Query: 1345 EETRKLIFSRDVKFVEDNIP----------------------------HIS--HSQKETY 1434
+ +K + SRDV F E P HIS HS
Sbjct: 792 LKDKKXLISRDVTFFETEFPYQNXLSTTSPSLDTFFPSLPQTPDIDDDHISFNHSGSNLQ 851
Query: 1435 PTIQFEMSDNYVENTTRNEHKKEDKQDPQN--SLHSTGQQSSDSSTKQPEPQKSINSNND 1608
P+ + D + + T N H P + SL+++ S S QP
Sbjct: 852 PSATSSV-DXHPQPTLDNSHSSSHVDPPSSPPSLNTSPPVISQPSPSQPR---------- 900
Query: 1609 RTSKG*REPTT-ELINNDAASHPLPLWAKKTLEDNTGKVYKGYYGYLTRGRKKKGEEFLC 1785
R+S+ + PTT + + +AA P+ T E L+ R +
Sbjct: 901 RSSRPTKTPTTLQDFHIEAALPSRPVPPSSTSEVAHSGTIHSLSQVLSYDRLSPMHKAF- 959
Query: 1786 NIAEIPNPKGPKNIKDALANHNWKEVMDKEIQMLSNRYTWELRKPPIDKEVTGCRRVYNI 1965
+I K P++ A+ + W+E M+ EIQ L TW L P K+ GC+ VY I
Sbjct: 960 -TVKITLAKEPRSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHKKPIGCKWVYKI 1018
Query: 1966 KYHPN 1980
KY+P+
Sbjct: 1019 KYNPD 1023
Score = 55.8 bits (133), Expect(3) = 3e-54
Identities = 33/96 (34%), Positives = 46/96 (47%)
Frame = +3
Query: 519 CFLTNTELSNLWHNRLGHINNKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPFRSS 698
C + NT+ +LWH RLGH + SKV L TCS +AK + PF S
Sbjct: 522 CNVVNTKTQDLWHQRLGHPS----SKVSVLFPFLQNKTLDVSTCSICPLAKHTRTPFPLS 577
Query: 699 TISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSND 806
SS C ++IH D+ G ++ +Y LT +D
Sbjct: 578 VSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIVDD 613
Score = 41.6 bits (96), Expect(3) = 3e-54
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Frame = +2
Query: 119 IFYTNKDYNNVGWFLDSGCNSHMTSDKDCFTNLKISNNGKFVKTTGDDRLPLKGYGDIIL 298
+F ++D + W LDSG + H+ D T+ + +N + VK + G +
Sbjct: 393 VFALSRDIKDTMWILDSGASDHIVCDSSFLTSFQPVHN-RIVKLPDGTSAHVSHIGTV-- 449
Query: 299 NFGTNTITLTDALYVKGLQKYLISLYKLLSQRYYMRAFQKENGETCC*ISYYQ--KIVAK 472
+F + L + L V LIS+ KL +Y+ F ++ C I Q K++
Sbjct: 450 SFSAQFV-LHNVLCVPLFYLNLISISKLAFDSFYVTIFLRQ----VCFIQDLQSGKMIGM 504
Query: 473 GTEQNGLFVM 502
GTE GL+ +
Sbjct: 505 GTESEGLYCL 514
>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
Length = 1239
Score = 158 bits (399), Expect(3) = 3e-54
Identities = 112/390 (28%), Positives = 181/390 (46%), Gaps = 3/390 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
++ W+ +LK KSEVFE F F+ + E I +D G FTS +F+++C GI+
Sbjct: 423 TRYMWSILLKEKSEVFEKFKTFKALVEKEVNKVIVTLRTDRGGEFTSRDFQDYCNNNGIR 482
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+ + PY PQ N V ER+NRTL+EM RS+L++ + WGE+ ATY++N +P R+L
Sbjct: 483 RHLTAPYTPQQNGVVERRNRTLMEMTRSMLKAMNVPNYMWGEAVRHATYLINRVPTRALK 542
Query: 1168 CITPFQICSF---KPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKI 1338
TP++ SF KPSI H+RVF L + + KLD ++ + +G SK Y++
Sbjct: 543 NQTPYE--SFKGRKPSIGHIRVFGCLAYAKLDAALLKKLDDRSQTLVHLGIEPGSKAYRL 600
Query: 1339 LDEETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDP 1518
+ TR+++ SRDVKF E + + + K E + + D
Sbjct: 601 YNPSTRRIVVSRDVKFDEKACWNWNETDKGNQ------------EESGKFHMTWGSSIDE 648
Query: 1519 QNSLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKT 1698
N G ++ + E Q+ EPT E+ + + + K
Sbjct: 649 GNGPFVIGSHQEENIATETEQQEETT-----------EPTPEVDHVEPRRSSREVKLPKH 697
Query: 1699 LEDNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKEI 1878
LED Y L + + E LC+I + P ++A + W + + EI
Sbjct: 698 LED---------YILLA---EIECELLLCSIND-----EPSTYQEAKIHVRWTKACEDEI 740
Query: 1879 QMLSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
++ TW+L P +V G + ++ IK
Sbjct: 741 DSINRNQTWKLVDKPHGVKVIGLKWIFKIK 770
Score = 61.2 bits (147), Expect(3) = 3e-54
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Frame = +3
Query: 429 KLVAKSLTTRK*LLKEPNKTGYLS*NLC**CFLTN-TELSNLWHNRLGHINNKSLSKV-E 602
+L+ K L + L K K G S C LT E WH RLGHIN K++ + +
Sbjct: 298 RLLVKVLRSPNRLYKVSLKVGKPS------CLLTKINEEPWRWHARLGHINFKTIKDMAK 351
Query: 603 AAVSHGLKNFLPTKT-CSS*IIAKLHKKPFRSSTIS-STRCLEIIHFDLCGPITPTTMQ* 776
+ GL K C S ++ K + F S+T S++ LE++H DLCGPI+P+T+
Sbjct: 352 LEMVRGLPEINEEKKLCESCLVGKQTRNSFPSATPHRSSQVLELLHADLCGPISPSTLAQ 411
Query: 777 KRYILTFSND 806
RYI +D
Sbjct: 412 NRYIFVIIDD 421
Score = 43.1 bits (100), Expect(3) = 3e-54
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 155 WFLDSGCNSHMTSDKDCFTNLKISNNGKFVKTTGDDRLPLKGYGDIILNFGT-NTITLTD 331
W+LD+G ++HMT DK F+ L S G+ VK + + G G II T LT+
Sbjct: 201 WYLDNGASNHMTGDKSFFSELNESIKGR-VKFGDGSCVKINGKGSIIFEAKTGEQKLLTN 259
Query: 332 ALYVKGLQKYLISLYKLLSQ 391
Y+ L+ ++SL + Q
Sbjct: 260 IYYIPELRSNILSLGQATEQ 279
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 182 bits (463), Expect(2) = 4e-54
Identities = 123/388 (31%), Positives = 188/388 (48%), Gaps = 1/388 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ W Y LK KSE F F+ + + G KI SD G + F NF ++GI
Sbjct: 519 SRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIV--FGNFFKEQGIH 576
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
++ Q N VAERKNRT++EM RS+L++ L ++WG++ YILN P +S+
Sbjct: 577 HQMTARMTTQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVP 636
Query: 1168 CITPFQI-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
+TP++ C KPS+SHL+VF + + HIP + RGKLD K+ K IM+GYNE SK Y++ +
Sbjct: 637 GMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYN 696
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
+RK+I +RDV F ED + + E + N NE +E +Q
Sbjct: 697 PVSRKIIINRDVIFSED--------ESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQ 748
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
++ +SS SST S +++ND S P + + + +
Sbjct: 749 AV-----ESSSSST-------SSSTSNDEIS------------------PRRMRSIQEIY 778
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKEIQM 1884
+NT ++ ++ N A GP +A+ + WK MD+EI
Sbjct: 779 NNTNRINVDHF---------------ANFALFAG-VGPVTFDEAIQDEKWKIAMDQEIDA 822
Query: 1885 LSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
+ TWEL + P +K+ G + VY K
Sbjct: 823 IRRNETWELMELPTNKQALGVKWVYRTK 850
Score = 58.2 bits (139), Expect(2) = 4e-54
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +3
Query: 549 LWHNRLGHINNKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPFRSSTI-SSTRCLE 725
LWH R GH+N KSLS + KN + + C I+AK H+ F + +++ LE
Sbjct: 442 LWHFRYGHLNFKSLSYL-------CKNHM-VRVC---ILAKHHRDSFPTGKAWRASKPLE 490
Query: 726 IIHFDLCGPITPTTMQ*KRYILTFSNDFKNDM 821
+IH DLCGP+ TT RY +TF +DF +
Sbjct: 491 LIHTDLCGPMRTTTNGGNRYFITFIDDFSRKL 522
>gb|AAK12626.1| unknown protein [Aedes aegypti]
Length = 1298
Score = 167 bits (423), Expect(3) = 6e-54
Identities = 120/388 (30%), Positives = 183/388 (47%), Gaps = 1/388 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+ T TY+LKHKSE ++ + F K + G K + SD G F + ++F GIK
Sbjct: 502 SRFTVTYLLKHKSEAAQNIIDFVKWTENLFGRKPSVIRSDGGGEFDNKLLRDFYRANGIK 561
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+ PY PQ N VAERKNR++ EM +L S L ++WGE+ LTATYI N +P RS+
Sbjct: 562 PQFTTPYTPQSNGVAERKNRSITEMATCMLLDSGLDKRFWGEAVLTATYIQNRIPSRSVP 621
Query: 1168 CITPFQI-CSFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TPF++ KP + HLRVF + H+P +R K+DPKA + I +GY+ E KGY+ +D
Sbjct: 622 -KTPFEMWWGRKPDLGHLRVFGSPAYVHVPDVKRSKMDPKAKRLIFVGYSMEHKGYRFVD 680
Query: 1345 EETRKLIFSRDVKFVEDNIPHISHSQKETYPTIQFEMSDNYVENTTRNEHKKEDKQDPQN 1524
ET + SRD +F+E Q+ +++ S+N T++ + E +P
Sbjct: 681 TETDCITISRDARFIE---------QENGTSSVEIPTSEN---GTSKKQANGEINPNPFK 728
Query: 1525 SLHSTGQQSSDSSTKQPEPQKSINSNNDRTSKG*REPTTELINNDAASHPLPLWAKKTLE 1704
T ++ S+ + P+ + + + RE T K LE
Sbjct: 729 EETDT-EEISEEEEEFSTPRAESSGVSGPVRRSARENRT---------------IPKHLE 772
Query: 1705 DNTGKVYKGYYGYLTRGRKKKGEEFLCNIAEIPNPKGPKNIKDALANHNWKEVMDKEIQM 1884
D YL E+ IA + P N +AL + W+ M E+
Sbjct: 773 D-----------YLL--------EYAVGIAACA-VEEPDNHLEALESAEWRTAMKDEMDS 812
Query: 1885 LSNRYTWELRKPPIDKEVTGCRRVYNIK 1968
TWEL P ++ G + ++ +K
Sbjct: 813 HQRNGTWELVPLPPGRKPVGSKWIFKVK 840
Score = 50.1 bits (118), Expect(3) = 6e-54
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Frame = +3
Query: 546 NLWHNRLGHIN---NKSLSKVEAAVSHGLKNFLPTKTCSS*IIAKLHKKPFRSSTI-SST 713
+LWH RLGH + + ++K E A + + C + K + PF S ST
Sbjct: 410 HLWHRRLGHRDWAAAERINKEELATGMKVGDCGLRLVCECCLDGKAARAPFPSIVERKST 469
Query: 714 RCLEIIHFDLCGPITPTTMQ*KRYILTFSNDF 809
R L+IIH DLCGP+ TT R+++ +D+
Sbjct: 470 RILDIIHTDLCGPMKTTTPSGNRFVMHLIDDY 501
Score = 43.9 bits (102), Expect(3) = 6e-54
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 10/154 (6%)
Frame = +2
Query: 74 KNKKANLAKIK----DHIYIFYTNKDYNNVGWFLDSGCNSHMTSDKDCFTNLKISNNGKF 241
K KK++ K K D I + N W +DSG ++HMT DK F + S G +
Sbjct: 244 KPKKSDSVKAKAVHSDTRGIAFVVNGENARSWIIDSGASAHMTCDKSFFITFEESCGG-Y 302
Query: 242 VKTTGDDRLPLKGYGDIILNFGTN------TITLTDALYVKGLQKYLISLYKLLSQRYYM 403
+ + + G G +L+ G + I ++ YV GL LIS+ KL ++ +
Sbjct: 303 ITLADGKKTQILGEGAGVLH-GIDGDDEVIRIDISGVKYVPGLSTNLISVEKLAQKKLDV 361
Query: 404 RAFQKENGETCC*ISYYQKIVAKGTEQNGLFVMK 505
N + C I +VA G GL+ ++
Sbjct: 362 ----SFNSDGCRIIDPKGNVVATGVRCGGLYHLR 391
>emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera]
Length = 1220
Score = 157 bits (398), Expect(3) = 6e-54
Identities = 80/198 (40%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Frame = +1
Query: 808 SKMTWTYVLKHKSEVFEHFLKFRKKAQIEKGSKITCFCSDNGT*FTSTEFKNFCIKKGIK 987
S+MTW Y LK KS+V F F+K + + G + DNG + S EF
Sbjct: 525 SRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNVKVLIIDNGGEYISKEFN--------- 575
Query: 988 KEVAVPYNPQ*NDVAERKNRTLVEMVRSLLQSSQLSTKWWGESTLTATYILNLLPRRSLD 1167
+ PY PQ N+V+ERKN+T++EM R +L +L W E+ T+ Y+LN LP +S+
Sbjct: 576 --LTAPYLPQQNEVSERKNKTVMEMARCMLFEKRLPKLLWAEAVNTSVYLLNRLPTKSVQ 633
Query: 1168 CITPFQIC-SFKPSISHLRVFERLCFYHIPKEQRGKLDPKANKSIMIGYNEESKGYKILD 1344
TP + KPS+ HL+VF LC+ H+P +RGKLD +A K + +GY ESKGY+I
Sbjct: 634 SKTPIEAWFGVKPSVKHLKVFGSLCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYS 693
Query: 1345 EETRKLIFSRDVKFVEDN 1398
K++ SRDV F E++
Sbjct: 694 LSRMKIVISRDVHFDENS 711
Score = 55.5 bits (132), Expect(3) = 6e-54
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Frame = +2
Query: 41 RSRPKGPHQNPKNKKANLAKIK---DHIYIFYTNKDYNNVG-WFLDSGCNSHMTSDKDCF 208
R++ K Q P+ + + + K +H+++ + + W +DSGC SHMT F
Sbjct: 264 RAKKKQSQQQPEKNASVIEENKNDDEHLFMASQTLSSHELNTWLIDSGCTSHMTKYLSIF 323
Query: 209 TNLKISNNGKFVKTTGDDRLPLKGYGDIILNFGTNTITLTDALYVKGLQKYLISLYKLLS 388
T++ S K VK + + KG G I ++ T +T+ LY+ L + L+S+ ++L
Sbjct: 324 TSIDRSVQPK-VKLGNGEVVQAKGKGTIAISTKRGTKIVTNVLYIPDLDQNLLSVAQMLR 382
Query: 389 QRYYMRAFQKENGETCC*ISYYQKIVAKGTEQNGLFVMKPMLI 517
Y + KEN C + +K +AK +F +K L+
Sbjct: 383 NGYAVSF--KEN--FCFITNVQEKEIAKIKMNGNIFYLKLDLV 421
Score = 48.1 bits (113), Expect(3) = 6e-54
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +3
Query: 522 FLTNTELSNLWHNRLGHINNKSLSKVEAA--VSHGLKNFLPTKTCSS*IIAKLHKKPF-R 692
F + S +WH GH N KSL ++ A V L+ + +TC S + K ++PF +
Sbjct: 426 FSAKIDESVVWHKSYGHFNLKSLRFMQEAGMVEDMLEISVNAQTCESCELGKQQRQPFPQ 485
Query: 693 SSTISSTRCLEIIHFDLCGPITPTTMQ*KRYILTFSND 806
+ + +T LE+IH +CGP++ ++ Y F +D
Sbjct: 486 NMSKRATHELELIHSYICGPMSIASLSNNVYFALFIDD 523