BLASTX nr result
ID: Ephedra25_contig00000830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00000830
(429 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22346.1| unknown [Picea sitchensis] 134 1e-29
sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ... 134 2e-29
gb|ABK26715.1| unknown [Picea sitchensis] 134 2e-29
ref|XP_004247753.1| PREDICTED: 50S ribosomal protein L28, chloro... 132 6e-29
ref|XP_006354458.1| PREDICTED: 50S ribosomal protein L28, chloro... 131 8e-29
ref|NP_001241464.1| uncharacterized protein LOC100804320 [Glycin... 130 1e-28
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides] 130 1e-28
emb|CBI23685.3| unnamed protein product [Vitis vinifera] 130 2e-28
ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloro... 130 2e-28
gb|EMJ24856.1| hypothetical protein PRUPE_ppa012783mg [Prunus pe... 129 3e-28
ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Popu... 129 4e-28
gb|ABK95755.1| unknown [Populus trichocarpa] 129 4e-28
gb|EOY06128.1| Ribosomal L28 family [Theobroma cacao] 128 7e-28
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro... 128 9e-28
ref|XP_002312590.2| hypothetical protein POPTR_0008s16970g [Popu... 127 1e-27
ref|XP_006857446.1| hypothetical protein AMTR_s00067p00174670 [A... 127 1e-27
ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro... 127 1e-27
ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana... 127 2e-27
gb|ESW17913.1| hypothetical protein PHAVU_007G278700g [Phaseolus... 127 2e-27
ref|XP_006295121.1| hypothetical protein CARUB_v10024195mg [Caps... 127 2e-27
>gb|ABK22346.1| unknown [Picea sitchensis]
Length = 148
Score = 134 bits (337), Expect = 1e-29
Identities = 61/94 (64%), Positives = 78/94 (82%)
Frame = +1
Query: 10 NEPILFSKAPLLLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGK 189
N ++ + +++QPLA RVCP TGK++N ANKVS S H+TKKLQ VN+Q KR+WWEAGK
Sbjct: 55 NAKLVATSTAIVVQPLASRVCPLTGKRANNANKVSFSNHKTKKLQGVNLQYKRIWWEAGK 114
Query: 190 RMVRLKLSTKALKTVSKKGLDTMAKEAGIDLRKL 291
R V+L++STKALKT+ KKGLD MAK+AGIDL+KL
Sbjct: 115 RFVKLRISTKALKTIEKKGLDAMAKKAGIDLKKL 148
>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
ribosomal protein L28 precursor, chloroplast - tobacco
gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
ribosomal protein CL28 [Nicotiana tabacum]
Length = 151
Score = 134 bits (336), Expect = 2e-29
Identities = 65/101 (64%), Positives = 80/101 (79%), Gaps = 6/101 (5%)
Frame = +1
Query: 4 VNNEPILFSKAPLL------LQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTK 165
+++ + S APL LQP+A R+CPFTGKKSNRANKVSHS H+TKKLQ VN+Q K
Sbjct: 50 ISSTHFISSSAPLSVPFKPSLQPVARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYK 109
Query: 166 RVWWEAGKRMVRLKLSTKALKTVSKKGLDTMAKEAGIDLRK 288
R+WWEAGKR V+L+LSTKA+KT+ K GLD +AK+AGIDL K
Sbjct: 110 RIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 150
>gb|ABK26715.1| unknown [Picea sitchensis]
Length = 148
Score = 134 bits (336), Expect = 2e-29
Identities = 61/94 (64%), Positives = 78/94 (82%)
Frame = +1
Query: 10 NEPILFSKAPLLLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGK 189
N ++ + +++QPLA RVCP TGK++N ANKVS S H+TKKLQ VN+Q KR+WWEAGK
Sbjct: 55 NAKLVATSTAVVVQPLASRVCPLTGKRANNANKVSFSNHKTKKLQGVNLQYKRIWWEAGK 114
Query: 190 RMVRLKLSTKALKTVSKKGLDTMAKEAGIDLRKL 291
R V+L++STKALKT+ KKGLD MAK+AGIDL+KL
Sbjct: 115 RFVKLRISTKALKTIEKKGLDAMAKKAGIDLKKL 148
>ref|XP_004247753.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Solanum
lycopersicum]
Length = 149
Score = 132 bits (331), Expect = 6e-29
Identities = 61/81 (75%), Positives = 71/81 (87%)
Frame = +1
Query: 46 LQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRMVRLKLSTKAL 225
LQP+A RVCPFTGKKSNRANKVSHS H+TKKLQ VN+Q KR+WWE GKR V+L+LSTKA+
Sbjct: 68 LQPVARRVCPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEEGKRFVKLRLSTKAI 127
Query: 226 KTVSKKGLDTMAKEAGIDLRK 288
KT+ K GLD +AK+AGIDL K
Sbjct: 128 KTIEKNGLDAVAKKAGIDLSK 148
>ref|XP_006354458.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Solanum
tuberosum]
Length = 149
Score = 131 bits (330), Expect = 8e-29
Identities = 60/81 (74%), Positives = 71/81 (87%)
Frame = +1
Query: 46 LQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRMVRLKLSTKAL 225
LQP+A R+CPFTGKKSNRANKVSHS H+TKKLQ VN+Q KR+WWE GKR V+L+LSTKA+
Sbjct: 68 LQPVARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEEGKRFVKLRLSTKAI 127
Query: 226 KTVSKKGLDTMAKEAGIDLRK 288
KT+ K GLD +AK+AGIDL K
Sbjct: 128 KTIEKNGLDAVAKKAGIDLSK 148
>ref|NP_001241464.1| uncharacterized protein LOC100804320 [Glycine max]
gi|255642185|gb|ACU21357.1| unknown [Glycine max]
Length = 136
Score = 130 bits (328), Expect = 1e-28
Identities = 64/91 (70%), Positives = 74/91 (81%)
Frame = +1
Query: 16 PILFSKAPLLLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRM 195
P+ S P L +A RVCPFTGKKSNRANKVS S H+TKKLQ VN+Q KR+WWEAGKR
Sbjct: 45 PLTASPFPTPLPIVAKRVCPFTGKKSNRANKVSFSNHKTKKLQFVNLQYKRIWWEAGKRY 104
Query: 196 VRLKLSTKALKTVSKKGLDTMAKEAGIDLRK 288
V+L+LSTKALKT+ K GLD +AK+AGIDLRK
Sbjct: 105 VKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 135
>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 153
Score = 130 bits (328), Expect = 1e-28
Identities = 63/92 (68%), Positives = 75/92 (81%)
Frame = +1
Query: 13 EPILFSKAPLLLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKR 192
EP+ +P L +A R+CPFTGKK+NRANKVS S H+TKKLQ VN+Q KRVWWEAGKR
Sbjct: 61 EPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKR 120
Query: 193 MVRLKLSTKALKTVSKKGLDTMAKEAGIDLRK 288
V+L+LSTKALKT+ K GLD +AK+AGIDLRK
Sbjct: 121 YVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 152
>emb|CBI23685.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 130 bits (326), Expect = 2e-28
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = +1
Query: 16 PILFSKAPLLLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRM 195
PI + L L+P+A RVCPFTGKK+N+ANKVS S H+TKKLQ VN+Q K++WWEAGKR
Sbjct: 27 PIPSAPLTLPLRPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRY 86
Query: 196 VRLKLSTKALKTVSKKGLDTMAKEAGIDLRK 288
V+L+LSTKALKT+ K GLD +AK+AGIDLRK
Sbjct: 87 VKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 117
>ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Vitis
vinifera]
Length = 146
Score = 130 bits (326), Expect = 2e-28
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = +1
Query: 16 PILFSKAPLLLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRM 195
PI + L L+P+A RVCPFTGKK+N+ANKVS S H+TKKLQ VN+Q K++WWEAGKR
Sbjct: 55 PIPSAPLTLPLRPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRY 114
Query: 196 VRLKLSTKALKTVSKKGLDTMAKEAGIDLRK 288
V+L+LSTKALKT+ K GLD +AK+AGIDLRK
Sbjct: 115 VKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 145
>gb|EMJ24856.1| hypothetical protein PRUPE_ppa012783mg [Prunus persica]
Length = 154
Score = 129 bits (325), Expect = 3e-28
Identities = 62/87 (71%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Frame = +1
Query: 34 APLLLQPL-AGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRMVRLKL 210
+P LQP+ A R+CPFTGKKSNRANK+S S H+TKKLQ VN+Q KRVWWEAGKR ++L+L
Sbjct: 68 SPPALQPIVARRICPFTGKKSNRANKISFSAHKTKKLQFVNLQYKRVWWEAGKRFLKLRL 127
Query: 211 STKALKTVSKKGLDTMAKEAGIDLRKL 291
STKALKT+ K G+D +AK+AGIDLRKL
Sbjct: 128 STKALKTIEKNGIDAVAKKAGIDLRKL 154
>ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Populus trichocarpa]
gi|550329333|gb|EEF01745.2| hypothetical protein
POPTR_0010s07920g [Populus trichocarpa]
Length = 153
Score = 129 bits (324), Expect = 4e-28
Identities = 62/92 (67%), Positives = 75/92 (81%)
Frame = +1
Query: 13 EPILFSKAPLLLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKR 192
+P+ +P L +A R+CPFTGKK+NRANKVS S H+TKKLQ VN+Q KRVWWEAGKR
Sbjct: 61 KPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKR 120
Query: 193 MVRLKLSTKALKTVSKKGLDTMAKEAGIDLRK 288
V+L+LSTKALKT+ K GLD +AK+AGIDLRK
Sbjct: 121 YVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 152
>gb|ABK95755.1| unknown [Populus trichocarpa]
Length = 150
Score = 129 bits (324), Expect = 4e-28
Identities = 62/92 (67%), Positives = 75/92 (81%)
Frame = +1
Query: 13 EPILFSKAPLLLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKR 192
+P+ +P L +A R+CPFTGKK+NRANKVS S H+TKKLQ VN+Q KRVWWEAGKR
Sbjct: 58 KPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKR 117
Query: 193 MVRLKLSTKALKTVSKKGLDTMAKEAGIDLRK 288
V+L+LSTKALKT+ K GLD +AK+AGIDLRK
Sbjct: 118 YVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149
>gb|EOY06128.1| Ribosomal L28 family [Theobroma cacao]
Length = 144
Score = 128 bits (322), Expect = 7e-28
Identities = 60/81 (74%), Positives = 72/81 (88%)
Frame = +1
Query: 46 LQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRMVRLKLSTKAL 225
L+P+A RVCPFTGKK+N+ANKVS S H+TKKLQ VN+Q K+VWWEAGKR V+L+LSTKAL
Sbjct: 63 LRPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKAL 122
Query: 226 KTVSKKGLDTMAKEAGIDLRK 288
KT+ K GLD +AK+AGIDLRK
Sbjct: 123 KTIEKNGLDAVAKKAGIDLRK 143
>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
sativus]
Length = 150
Score = 128 bits (321), Expect = 9e-28
Identities = 63/93 (67%), Positives = 75/93 (80%), Gaps = 2/93 (2%)
Frame = +1
Query: 16 PILFSKAPLL--LQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGK 189
P S APL LQP+A R+CPFTGKK+N+ N VS S H+TKKLQ VN+Q K+VWWEAGK
Sbjct: 57 PASISTAPLRPSLQPVARRICPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGK 116
Query: 190 RMVRLKLSTKALKTVSKKGLDTMAKEAGIDLRK 288
R V+L+LSTKALKT+ K GLD +AK+AGIDLRK
Sbjct: 117 RFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149
>ref|XP_002312590.2| hypothetical protein POPTR_0008s16970g [Populus trichocarpa]
gi|550333255|gb|EEE89957.2| hypothetical protein
POPTR_0008s16970g [Populus trichocarpa]
Length = 104
Score = 127 bits (320), Expect = 1e-27
Identities = 62/82 (75%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Frame = +1
Query: 46 LQPL-AGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRMVRLKLSTKA 222
+QPL A R+CPFTGKK+NRANKVS S H+TKKLQ VN+Q KRVWWEAGKR V+L+LSTKA
Sbjct: 22 IQPLVARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKA 81
Query: 223 LKTVSKKGLDTMAKEAGIDLRK 288
LKT+ K GLD +AK+AGIDLRK
Sbjct: 82 LKTIEKNGLDAVAKKAGIDLRK 103
>ref|XP_006857446.1| hypothetical protein AMTR_s00067p00174670 [Amborella trichopoda]
gi|548861539|gb|ERN18913.1| hypothetical protein
AMTR_s00067p00174670 [Amborella trichopoda]
Length = 162
Score = 127 bits (320), Expect = 1e-27
Identities = 60/82 (73%), Positives = 72/82 (87%)
Frame = +1
Query: 43 LLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRMVRLKLSTKA 222
++QP+A RVC FTGKK+NRANKVS S H+TKKLQ VN+Q KRVWWEAGKR ++L+LSTKA
Sbjct: 80 MIQPVARRVCRFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYLKLRLSTKA 139
Query: 223 LKTVSKKGLDTMAKEAGIDLRK 288
LKT+ K GLD +AK+AGIDLRK
Sbjct: 140 LKTIEKNGLDAVAKKAGIDLRK 161
>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
sativus]
Length = 150
Score = 127 bits (320), Expect = 1e-27
Identities = 63/93 (67%), Positives = 75/93 (80%), Gaps = 2/93 (2%)
Frame = +1
Query: 16 PILFSKAPLL--LQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGK 189
P S APL LQP+A R+CPFTGKK+N+ N VS S H+TKKLQ VN+Q K+VWWEAGK
Sbjct: 57 PSSISTAPLRPSLQPVARRICPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGK 116
Query: 190 RMVRLKLSTKALKTVSKKGLDTMAKEAGIDLRK 288
R V+L+LSTKALKT+ K GLD +AK+AGIDLRK
Sbjct: 117 RFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149
>ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana]
gi|21542433|sp|O22795.2|RK28_ARATH RecName: Full=50S
ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|18252877|gb|AAL62365.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|20196843|gb|AAB80662.2|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21387067|gb|AAM47937.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21592705|gb|AAM64654.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|330253742|gb|AEC08836.1| 50S
ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 127 bits (319), Expect = 2e-27
Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Frame = +1
Query: 46 LQPL-AGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRMVRLKLSTKA 222
+QP+ A R+CPFTGKK+NRANKVS S H+TKKLQ VN+Q KRVWWEAGKR V+L+LSTKA
Sbjct: 61 IQPIVARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKA 120
Query: 223 LKTVSKKGLDTMAKEAGIDLRK 288
LKT+ K GLD +AK+AGIDLRK
Sbjct: 121 LKTIEKNGLDAVAKKAGIDLRK 142
>gb|ESW17913.1| hypothetical protein PHAVU_007G278700g [Phaseolus vulgaris]
Length = 135
Score = 127 bits (319), Expect = 2e-27
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +1
Query: 34 APLLLQPLAGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRMVRLKLS 213
APL + +A RVCPFTGKKSNRANKVS S H+TKKLQ VN+Q KR+WWEAGKR V+L+LS
Sbjct: 52 APLPI--VAKRVCPFTGKKSNRANKVSFSNHKTKKLQFVNLQYKRIWWEAGKRFVKLRLS 109
Query: 214 TKALKTVSKKGLDTMAKEAGIDLRK 288
TKALKT+ K GLD +AK+AG+DLRK
Sbjct: 110 TKALKTIEKNGLDAVAKKAGVDLRK 134
>ref|XP_006295121.1| hypothetical protein CARUB_v10024195mg [Capsella rubella]
gi|482563829|gb|EOA28019.1| hypothetical protein
CARUB_v10024195mg [Capsella rubella]
Length = 166
Score = 127 bits (319), Expect = 2e-27
Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Frame = +1
Query: 46 LQPL-AGRVCPFTGKKSNRANKVSHSKHRTKKLQKVNIQTKRVWWEAGKRMVRLKLSTKA 222
+QP+ A R+CPFTGKK+NRANKVS S H+TKKLQ VN+Q KRVWWEAGKR V+L+LSTKA
Sbjct: 84 IQPIVARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKA 143
Query: 223 LKTVSKKGLDTMAKEAGIDLRK 288
LKT+ K GLD +AK+AGIDLRK
Sbjct: 144 LKTIEKNGLDAVAKKAGIDLRK 165