BLASTX nr result
ID: Ephedra25_contig00000693
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00000693
(410 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006855734.1| hypothetical protein AMTR_s00044p00160130 [A... 76 5e-12
gb|ABK21026.1| unknown [Picea sitchensis] gi|116782574|gb|ABK225... 75 1e-11
gb|EPS64999.1| hypothetical protein M569_09780, partial [Genlise... 74 3e-11
gb|EPS69148.1| hypothetical protein M569_05619, partial [Genlise... 72 1e-10
gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil] 69 5e-10
ref|XP_006340837.1| PREDICTED: HMG1/2-like protein-like [Solanum... 69 7e-10
ref|XP_004232565.1| PREDICTED: HMG1/2-like protein-like isoform ... 69 7e-10
ref|XP_004232564.1| PREDICTED: HMG1/2-like protein-like isoform ... 69 7e-10
emb|CAA05365.1| high mobility group protein [Solanum tuberosum] 69 7e-10
gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum] 68 1e-09
sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein 68 1e-09
gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirs... 67 2e-09
ref|XP_006416372.1| hypothetical protein EUTSA_v10009371mg [Eutr... 67 3e-09
gb|EPS70747.1| high mobility group family, partial [Genlisea aurea] 66 4e-09
gb|AET87126.1| high mobility group B2 protein [Brassica napus] 66 6e-09
dbj|BAJ33881.1| unnamed protein product [Thellungiella halophila] 66 6e-09
emb|CAA46876.1| DNA-binding protein [Zea mays] 65 7e-09
ref|NP_001058640.1| Os06g0728000 [Oryza sativa Japonica Group] g... 65 7e-09
ref|XP_006656519.1| PREDICTED: DNA-binding protein MNB1B-like [O... 65 7e-09
gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana] 65 7e-09
>ref|XP_006855734.1| hypothetical protein AMTR_s00044p00160130 [Amborella trichopoda]
gi|548859521|gb|ERN17201.1| hypothetical protein
AMTR_s00044p00160130 [Amborella trichopoda]
Length = 156
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/87 (47%), Positives = 48/87 (55%)
Frame = +3
Query: 150 MKGAKAKNEASSTLXXXXXXXXXXXXSATSSGSRVAXXXXXXXXXXXXXXXXSAFFVFME 329
MKG ++K E + AT S+ A SAFFVFME
Sbjct: 1 MKGGRSKAEVVKSSRKSDDKVAGKRKPATERASKPAKKGKPEKDPNKPKRPASAFFVFME 60
Query: 330 EFRKTFKEKNPNNRSVAAVGKAGGEKW 410
EFRKTFKEK+PNN+SVAAVGKAGG+KW
Sbjct: 61 EFRKTFKEKHPNNKSVAAVGKAGGDKW 87
>gb|ABK21026.1| unknown [Picea sitchensis] gi|116782574|gb|ABK22556.1| unknown
[Picea sitchensis] gi|116782678|gb|ABK22606.1| unknown
[Picea sitchensis] gi|116782786|gb|ABK22657.1| unknown
[Picea sitchensis] gi|116782898|gb|ABK22712.1| unknown
[Picea sitchensis] gi|116791878|gb|ABK26144.1| unknown
[Picea sitchensis] gi|148907501|gb|ABR16881.1| unknown
[Picea sitchensis] gi|224284566|gb|ACN40016.1| unknown
[Picea sitchensis] gi|224285212|gb|ACN40332.1| unknown
[Picea sitchensis] gi|224286734|gb|ACN41070.1| unknown
[Picea sitchensis]
Length = 157
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/91 (47%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = +3
Query: 150 MKGAKAKNEASSTLXXXXXXXXXXXXSATS----SGSRVAXXXXXXXXXXXXXXXXSAFF 317
MKG KAKNEASSTL +A S + SAFF
Sbjct: 1 MKGGKAKNEASSTLKKVEEKPIGKRKTAAKESKVSSRQEKKGRKAAKDPNKPKRPASAFF 60
Query: 318 VFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
VFME+FRKT+KEKNPN +SV+ VGKAGG+KW
Sbjct: 61 VFMEDFRKTYKEKNPNVKSVSVVGKAGGDKW 91
>gb|EPS64999.1| hypothetical protein M569_09780, partial [Genlisea aurea]
Length = 152
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/88 (47%), Positives = 49/88 (55%)
Frame = +3
Query: 147 AMKGAKAKNEASSTLXXXXXXXXXXXXSATSSGSRVAXXXXXXXXXXXXXXXXSAFFVFM 326
AMKGAK+K S A ++G A SAFFVFM
Sbjct: 1 AMKGAKSKAAESKKADAKLSVKR----GAAAAGKNPAKKAKPTKDPNKPKRPASAFFVFM 56
Query: 327 EEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
EEFRKT+KEK+PNN+SVAAVGKAGG+KW
Sbjct: 57 EEFRKTYKEKHPNNKSVAAVGKAGGDKW 84
>gb|EPS69148.1| hypothetical protein M569_05619, partial [Genlisea aurea]
Length = 152
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRKT+KEK+PNN+SVAAVGKAGGEKW
Sbjct: 50 SAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGEKW 84
>gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/35 (85%), Positives = 35/35 (100%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFME+FRKT+KEK+PNN+SVAAVGKAGG+KW
Sbjct: 41 SAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKW 75
>ref|XP_006340837.1| PREDICTED: HMG1/2-like protein-like [Solanum tuberosum]
Length = 141
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRKT+KEK+PNN+SVA VGKAGG+KW
Sbjct: 41 SAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKW 75
>ref|XP_004232565.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Solanum
lycopersicum]
Length = 140
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRKT+KEK+PNN+SVA VGKAGG+KW
Sbjct: 41 SAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKW 75
>ref|XP_004232564.1| PREDICTED: HMG1/2-like protein-like isoform 1 [Solanum
lycopersicum]
Length = 147
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRKT+KEK+PNN+SVA VGKAGG+KW
Sbjct: 41 SAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKW 75
>emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRKT+KEK+PNN+SVA VGKAGG+KW
Sbjct: 41 SAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKW 75
>gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRKT+KEK+PNN+SVAAVGKAGG+ W
Sbjct: 41 SAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAW 75
>sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
Length = 144
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFME+FRKT+KEK+PNN+SVA VGKAGG+KW
Sbjct: 41 SAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKW 75
>gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
Length = 139
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRK +KE NP+NRSV+AVGKAGGEKW
Sbjct: 43 SAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKW 77
>ref|XP_006416372.1| hypothetical protein EUTSA_v10009371mg [Eutrema salsugineum]
gi|557094143|gb|ESQ34725.1| hypothetical protein
EUTSA_v10009371mg [Eutrema salsugineum]
Length = 200
Score = 66.6 bits (161), Expect = 3e-09
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Frame = +3
Query: 63 PFHFLTHSSFRSRDF----ITLRLVFV---LFEKVAMKGAKAKNEASSTLXXXXXXXXXX 221
P H S +SR +TL +F L ++ MKG K+K E S+
Sbjct: 24 PSHSNRSQSVKSRTLSNPLLTLSPIFKPYDLRQESFMKGGKSKTETRSSKLSVNKKPTKG 83
Query: 222 XXSATSSGSRVAXXXXXXXXXXXXXXXXSAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGG 401
A ++ SAFFVFMEEFR+T+K+++PNN+SVAAVGKAGG
Sbjct: 84 GKGAAKDPNK-------------PKRPASAFFVFMEEFRETYKKEHPNNKSVAAVGKAGG 130
Query: 402 EKW 410
+KW
Sbjct: 131 QKW 133
>gb|EPS70747.1| high mobility group family, partial [Genlisea aurea]
Length = 152
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFF+FME+FRK +KEK+PNN+SVAAVGKAGG+KW
Sbjct: 41 SAFFIFMEDFRKHYKEKHPNNKSVAAVGKAGGDKW 75
>gb|AET87126.1| high mobility group B2 protein [Brassica napus]
Length = 145
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/87 (43%), Positives = 49/87 (56%)
Frame = +3
Query: 150 MKGAKAKNEASSTLXXXXXXXXXXXXSATSSGSRVAXXXXXXXXXXXXXXXXSAFFVFME 329
MKG K+K E S+ + + GS+ A SAFFVFME
Sbjct: 1 MKGGKSKTETRSS-----KLSVAKKPAKAAGGSKAAAKDPNKPKRPA-----SAFFVFME 50
Query: 330 EFRKTFKEKNPNNRSVAAVGKAGGEKW 410
+FR+T+K+ +PNN+SVAAVGKAGGEKW
Sbjct: 51 DFRQTYKKDHPNNKSVAAVGKAGGEKW 77
>dbj|BAJ33881.1| unnamed protein product [Thellungiella halophila]
Length = 141
Score = 65.9 bits (159), Expect = 6e-09
Identities = 28/35 (80%), Positives = 35/35 (100%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFR+T+K+++PNN+SVAAVGKAGG+KW
Sbjct: 40 SAFFVFMEEFRETYKKEHPNNKSVAAVGKAGGQKW 74
>emb|CAA46876.1| DNA-binding protein [Zea mays]
Length = 168
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRK FKEKNP N+SVAAVGKA G++W
Sbjct: 57 SAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRW 91
>ref|NP_001058640.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|3885888|gb|AAC78104.1| high mobility group protein
[Oryza sativa Japonica Group] gi|23345287|gb|AAN28722.1|
HMG1 protein [Oryza sativa Indica Group]
gi|30267833|gb|AAP21609.1| HMGB1 [Oryza sativa Indica
Group] gi|54291150|dbj|BAD61823.1| HMGB1 [Oryza sativa
Japonica Group] gi|113596680|dbj|BAF20554.1|
Os06g0728000 [Oryza sativa Japonica Group]
gi|213959190|gb|ACJ54929.1| HMG protein [Oryza sativa
Japonica Group] gi|215692803|dbj|BAG88247.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222636260|gb|EEE66392.1| hypothetical protein
OsJ_22728 [Oryza sativa Japonica Group]
Length = 157
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRK FKEKNP N+SVAAVGKA G++W
Sbjct: 47 SAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRW 81
>ref|XP_006656519.1| PREDICTED: DNA-binding protein MNB1B-like [Oryza brachyantha]
Length = 157
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFMEEFRK FKEKNP N+SVAAVGKA G++W
Sbjct: 47 SAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRW 81
>gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/87 (43%), Positives = 46/87 (52%)
Frame = +3
Query: 150 MKGAKAKNEASSTLXXXXXXXXXXXXSATSSGSRVAXXXXXXXXXXXXXXXXSAFFVFME 329
MKGAK+K E ST A ++ SAFFVFME
Sbjct: 522 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNK-------------PKRPSSAFFVFME 568
Query: 330 EFRKTFKEKNPNNRSVAAVGKAGGEKW 410
+FR T+KE++P N+SVAAVGKAGGEKW
Sbjct: 569 DFRVTYKEEHPKNKSVAAVGKAGGEKW 595
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = +3
Query: 306 SAFFVFMEEFRKTFKEKNPNNRSVAAVGKAGGEKW 410
SAFFVFME+FR+TFK++NP N+SVA VGKA G+KW
Sbjct: 420 SAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 454