BLASTX nr result
ID: Ephedra25_contig00000683
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00000683
(596 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis... 70 6e-10
dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana] 70 6e-10
dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana] 70 6e-10
ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Caps... 70 6e-10
ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidop... 70 6e-10
ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arab... 70 6e-10
ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 69 1e-09
ref|XP_004984246.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 67 3e-09
ref|XP_006403686.1| hypothetical protein EUTSA_v10010545mg [Eutr... 67 5e-09
ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [S... 67 5e-09
tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays] 66 6e-09
gb|ACR36437.1| unknown [Zea mays] 66 6e-09
ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays] gi|... 66 6e-09
ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 66 8e-09
ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutr... 65 1e-08
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps... 65 1e-08
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab... 65 1e-08
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 65 1e-08
ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 65 1e-08
gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indi... 65 1e-08
>ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa
ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160
[Arabidopsis thaliana] gi|18655393|gb|AAL76152.1|
AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
Length = 342
Score = 69.7 bits (169), Expect = 6e-10
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 297 SKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 339
>dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 69.7 bits (169), Expect = 6e-10
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 281 SKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 323
>dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 69.7 bits (169), Expect = 6e-10
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 289 SKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 331
>ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Capsella rubella]
gi|482560193|gb|EOA24384.1| hypothetical protein
CARUB_v10017634mg [Capsella rubella]
Length = 327
Score = 69.7 bits (169), Expect = 6e-10
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 282 SKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 324
>ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
Length = 363
Score = 69.7 bits (169), Expect = 6e-10
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 318 SKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 360
>ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata] gi|297323759|gb|EFH54180.1| hypothetical protein
ARALYDRAFT_348440 [Arabidopsis lyrata subsp. lyrata]
Length = 339
Score = 69.7 bits (169), Expect = 6e-10
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 294 SKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 336
>ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT S EEVEKA++NL+GTDLDGRQ+RV AEAR PR
Sbjct: 227 SRGFGFVTYGSSEEVEKAVSNLDGTDLDGRQIRVTVAEARQPR 269
>ref|XP_004984246.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Setaria
italica]
Length = 262
Score = 67.4 bits (163), Expect = 3e-09
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT S EEVE AI+NL+G DLDGRQ+RV AE+RPPR
Sbjct: 217 SRGFGFVTYGSSEEVENAISNLDGADLDGRQIRVTVAESRPPR 259
>ref|XP_006403686.1| hypothetical protein EUTSA_v10010545mg [Eutrema salsugineum]
gi|557104805|gb|ESQ45139.1| hypothetical protein
EUTSA_v10010545mg [Eutrema salsugineum]
Length = 324
Score = 66.6 bits (161), Expect = 5e-09
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT+ S +EV KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 279 SKGFGFVTLGSPQEVTKAINSLNGADLDGRQIRVSEAEARPPR 321
>ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein
SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 66.6 bits (161), Expect = 5e-09
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT S EEVE AI+NL+G+DLDGRQ+RV AE++PPR
Sbjct: 217 SRGFGFVTYGSAEEVENAISNLDGSDLDGRQIRVTVAESKPPR 259
>tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 66.2 bits (160), Expect = 6e-09
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT S EEVE AI+NL+G DLDGRQ+RV AE++PPR
Sbjct: 217 SRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPR 259
>gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 66.2 bits (160), Expect = 6e-09
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT S EEVE AI+NL+G DLDGRQ+RV AE++PPR
Sbjct: 217 SRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPR 259
>ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea
mays]
Length = 264
Score = 66.2 bits (160), Expect = 6e-09
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT S EEVE AI+NL+G DLDGRQ+RV AE++PPR
Sbjct: 219 SRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPR 261
>ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Oryza
brachyantha]
Length = 262
Score = 65.9 bits (159), Expect = 8e-09
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT S EEVE A++NL+GTDLDGRQ+RV AE+R PR
Sbjct: 217 SRGFGFVTYGSAEEVENAVSNLDGTDLDGRQIRVTVAESRQPR 259
>ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum]
gi|557112071|gb|ESQ52355.1| hypothetical protein
EUTSA_v10017023mg [Eutrema salsugineum]
Length = 292
Score = 65.5 bits (158), Expect = 1e-08
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT +S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 247 SKGFGFVTYNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPR 289
>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
gi|482563453|gb|EOA27643.1| hypothetical protein
CARUB_v10023790mg [Capsella rubella]
Length = 284
Score = 65.5 bits (158), Expect = 1e-08
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT +S +EV+ AI +LNG DLDGRQ+RV AEARPPR
Sbjct: 239 SKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPR 281
>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 65.5 bits (158), Expect = 1e-08
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
S+GFGFVT +S +EV+ AI +LNG DLDGRQ+RV AEARPPR
Sbjct: 244 SKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPR 286
>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X2 [Solanum tuberosum]
Length = 291
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT SS +EV KAI +LNG DLDGR +RV +AE RPPR
Sbjct: 246 SRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPR 288
>ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X1 [Solanum tuberosum]
Length = 301
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT SS +EV KAI +LNG DLDGR +RV +AE RPPR
Sbjct: 256 SRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPR 298
>gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 65.1 bits (157), Expect = 1e-08
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = +3
Query: 3 SRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 131
SRGFGFVT S EEVE A++NL+G D+DGRQ+RV AE++PPR
Sbjct: 220 SRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAESKPPR 262