BLASTX nr result

ID: Ephedra25_contig00000680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00000680
         (459 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24700.1| unknown [Picea sitchensis]                              67   2e-09
ref|XP_002982256.1| hypothetical protein SELMODRAFT_155033 [Sela...    63   5e-08
ref|XP_002966183.1| hypothetical protein SELMODRAFT_143829 [Sela...    60   4e-07
ref|XP_001757952.1| predicted protein [Physcomitrella patens] gi...    55   1e-05

>gb|ABK24700.1| unknown [Picea sitchensis]
          Length = 484

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/50 (66%), Positives = 42/50 (84%)
 Frame = -2

Query: 458 EKLHKNTLEAYQASERGGRLTVKVDRHKGRAYLQGDAVIVMLGVLLNTNI 309
           +KL K+TLEAYQASERGGR++V VD+  GR  LQG AV+VM+G LLN++I
Sbjct: 432 DKLQKDTLEAYQASERGGRVSVIVDKVGGRVNLQGSAVLVMVGTLLNSHI 481


>ref|XP_002982256.1| hypothetical protein SELMODRAFT_155033 [Selaginella moellendorffii]
           gi|300149848|gb|EFJ16501.1| hypothetical protein
           SELMODRAFT_155033 [Selaginella moellendorffii]
          Length = 296

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = -2

Query: 458 EKLHKNTLEAYQASERGGRLTVKVDRHKGRAYLQGDAVIVMLGVLL 321
           EKL KN+++ YQ SERGGR+ V VD+  GRA+LQG AVI M GVLL
Sbjct: 248 EKLEKNSVQGYQGSERGGRVLVTVDKANGRAHLQGSAVITMAGVLL 293


>ref|XP_002966183.1| hypothetical protein SELMODRAFT_143829 [Selaginella moellendorffii]
           gi|300165603|gb|EFJ32210.1| hypothetical protein
           SELMODRAFT_143829 [Selaginella moellendorffii]
          Length = 298

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%)
 Frame = -2

Query: 458 EKLHKNTLEAYQASERGGRLTVKVDRHKGRAYLQGDAVIVMLGVLL 321
           EKL KN++  YQ  ERGGR+ V VD+  GRA+LQG AVI M GVLL
Sbjct: 250 EKLEKNSVRGYQGLERGGRVLVTVDKANGRAHLQGSAVITMAGVLL 295


>ref|XP_001757952.1| predicted protein [Physcomitrella patens]
           gi|162690829|gb|EDQ77194.1| predicted protein
           [Physcomitrella patens]
          Length = 283

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -2

Query: 455 KLHKNTLEAYQASERGGRLTVKVDRHKGRAYLQGDAVIVMLGVLL 321
           KL K  L AYQAS RGG+  V+VD   GR YL GDAV +M GVLL
Sbjct: 239 KLGKTELNAYQASVRGGKFKVRVDEDAGRCYLLGDAVFIMGGVLL 283


Top