BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00000577
         (513 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46434.1| unknown [Lotus japonicus]                               77   2e-12
gb|ABK26111.1| unknown [Picea sitchensis] gi|116792769|gb|ABK264...    77   3e-12
gb|ABK22811.1| unknown [Picea sitchensis]                              77   3e-12
gb|ABK21316.1| unknown [Picea sitchensis] gi|116779793|gb|ABK214...    77   3e-12
ref|NP_001147391.1| photosystem II core complex proteins psbY [Z...    74   2e-11
gb|ACN39867.1| unknown [Picea sitchensis]                              74   3e-11
dbj|BAD09053.1| putative photosystem II core complex proteins ps...    72   1e-10
gb|AFW74395.1| hypothetical protein ZEAMMB73_053443, partial [Ze...    72   1e-10
gb|EEE67953.1| hypothetical protein OsJ_25851 [Oryza sativa Japo...    72   1e-10
ref|NP_001147385.1| photosystem II core complex proteins psbY [Z...    72   1e-10
ref|NP_001060874.1| Os08g0119800 [Oryza sativa Japonica Group] g...    72   1e-10
ref|XP_004135291.1| PREDICTED: photosystem II core complex prote...    71   2e-10
ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [S...    70   2e-10
gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays]     69   5e-10
ref|NP_001147739.1| photosystem II core complex proteins psbY [Z...    69   5e-10
ref|XP_004972988.1| PREDICTED: photosystem II core complex prote...    69   8e-10
ref|XP_004142959.1| PREDICTED: photosystem II core complex prote...    69   8e-10
ref|NP_001235479.1| uncharacterized protein LOC100500004 [Glycin...    69   8e-10
ref|XP_002515034.1| photosystem II core complex proteins psbY, c...    68   1e-09
ref|XP_002312650.1| Photosystem II core complex proteins psbY [P...    68   1e-09

>gb|AFK46434.1| unknown [Lotus japonicus]
          Length = 205

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQA--LFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALN 176
           GG AAG    +A +A A +   + D AA G SD RG L+  V+APA+GWVLFNILQPALN
Sbjct: 138 GGLAAGSGMLWAPEASAGELGIIADAAAAGGSDNRGQLLLFVVAPAIGWVLFNILQPALN 197

Query: 177 QLNRMRS 197
           Q+NRMRS
Sbjct: 198 QINRMRS 204



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/76 (46%), Positives = 41/76 (53%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           G A AG          A  A   +A     D RG  + L L PA+ WVLFNILQPALNQ+
Sbjct: 61  GTAIAGAIFSSLVSCDAAFAAQQIAEIAEGDNRGLALLLPLIPAIVWVLFNILQPALNQI 120

Query: 183 NRMRSN*KQIVEIQLG 230
           NRMR+    IV + LG
Sbjct: 121 NRMRNTKGVIVGLGLG 136


>gb|ABK26111.1| unknown [Picea sitchensis] gi|116792769|gb|ABK26490.1| unknown
           [Picea sitchensis] gi|148906010|gb|ABR16165.1| unknown
           [Picea sitchensis] gi|148906227|gb|ABR16269.1| unknown
           [Picea sitchensis] gi|148907833|gb|ABR17041.1| unknown
           [Picea sitchensis] gi|148908345|gb|ABR17286.1| unknown
           [Picea sitchensis] gi|224285567|gb|ACN40502.1| unknown
           [Picea sitchensis]
          Length = 207

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           G A    F    E+A A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ
Sbjct: 140 GAAGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQ 199

Query: 180 LNRMRS 197
           +N+MRS
Sbjct: 200 INKMRS 205



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/64 (53%), Positives = 43/64 (67%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           G A  G  S   + A A Q + +LAA   SD RG+L+ L L PA+ WVL+NILQPALNQ+
Sbjct: 70  GAALIGALSS-CDSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQI 125

Query: 183 NRMR 194
           NRM+
Sbjct: 126 NRMK 129


>gb|ABK22811.1| unknown [Picea sitchensis]
          Length = 206

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           G A    F    E+A A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ
Sbjct: 140 GAAGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQ 199

Query: 180 LNRMRS 197
           +N+MRS
Sbjct: 200 INKMRS 205



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/64 (53%), Positives = 43/64 (67%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           G A  G  S   + A A Q + +LAA   SD RG+L+ L L PA+ WVL+NILQPALNQ+
Sbjct: 70  GAALIGALSS-CDSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQI 125

Query: 183 NRMR 194
           NRM+
Sbjct: 126 NRMK 129


>gb|ABK21316.1| unknown [Picea sitchensis] gi|116779793|gb|ABK21432.1| unknown
           [Picea sitchensis] gi|116780291|gb|ABK21621.1| unknown
           [Picea sitchensis] gi|116782013|gb|ABK22335.1| unknown
           [Picea sitchensis] gi|116782043|gb|ABK22345.1| unknown
           [Picea sitchensis] gi|116784459|gb|ABK23350.1| unknown
           [Picea sitchensis] gi|116791697|gb|ABK26075.1| unknown
           [Picea sitchensis] gi|116791715|gb|ABK26082.1| unknown
           [Picea sitchensis] gi|224285486|gb|ACN40464.1| unknown
           [Picea sitchensis] gi|224285621|gb|ACN40529.1| unknown
           [Picea sitchensis]
          Length = 206

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           G A    F    E+A A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ
Sbjct: 140 GAAGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQ 199

Query: 180 LNRMRS 197
           +N+MRS
Sbjct: 200 INKMRS 205



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/64 (53%), Positives = 43/64 (67%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           G A  G  S   + A A Q + +LAA   SD RG+L+ L L PA+ WVL+NILQPALNQ+
Sbjct: 70  GAALIGALSS-CDSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQI 125

Query: 183 NRMR 194
           NRM+
Sbjct: 126 NRMK 129


>ref|NP_001147391.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195610958|gb|ACG27309.1| photosystem II core complex
           proteins psbY [Zea mays]
          Length = 176

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           G AAAG+ +P    A   Q L  +AA   + D RG L+ +V+APA+GWVLFNILQPALNQ
Sbjct: 110 GAAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQ 169

Query: 180 LNRMRSN 200
           LNRMRS+
Sbjct: 170 LNRMRSD 176



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 39/75 (52%), Positives = 47/75 (62%)
 Frame = +3

Query: 6   GAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLN 185
           G AA   +  A    A  A    AA+   D RG L+ +V+APA+GWVL+NILQPALNQLN
Sbjct: 36  GQAAKKAAVSASSPDAALADVVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLN 95

Query: 186 RMRSN*KQIVEIQLG 230
           RMRS+  Q V   LG
Sbjct: 96  RMRSS--QAVAAGLG 108


>gb|ACN39867.1| unknown [Picea sitchensis]
          Length = 206

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           G A    F    E+A A+Q +FDLAA+ ++ D R  L+ +V+ PA+GWVLFNILQPALNQ
Sbjct: 140 GAAGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRRLLLLIVVIPAIGWVLFNILQPALNQ 199

Query: 180 LNRMRS 197
           +N+MRS
Sbjct: 200 INKMRS 205



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/64 (53%), Positives = 43/64 (67%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           G A  G  S     A AQ+ + +LAA   SD RG+L+ L L PA+ WVL+NILQPALNQ+
Sbjct: 70  GAALIGALSSCDSTAAAQEVM-ELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQI 125

Query: 183 NRMR 194
           NRM+
Sbjct: 126 NRMK 129


>dbj|BAD09053.1| putative photosystem II core complex proteins psbY, chloroplast
           precursor (L-arginine metabolising enzyme) (L-AME)
           [Oryza sativa Japonica Group]
           gi|125559970|gb|EAZ05418.1| hypothetical protein
           OsI_27630 [Oryza sativa Indica Group]
           gi|215686966|dbj|BAG90836.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215695320|dbj|BAG90511.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765812|dbj|BAG87509.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 205

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
 Frame = +3

Query: 6   GAAAGVFSPYAEDAKAQQALFDLAAEGSS----DGRGSLIFLVLAPAVGWVLFNILQPAL 173
           GAAAG    +  +A A Q +  LAAE ++    D RG L+  V+APA+ WVL+NILQPAL
Sbjct: 137 GAAAGAGLAFPPEASAAQEVARLAAEAAAAEGGDNRGLLLLFVVAPAIAWVLYNILQPAL 196

Query: 174 NQLNRMRSN 200
           NQLNRMRS+
Sbjct: 197 NQLNRMRSD 205



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = +3

Query: 12  AAGVFSPYA--EDAKAQQALFDLAAE--GSSDGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           A   FS  A  + A A Q + D+AA   G+ D RG  + L +APA+ WVL+NILQPALNQ
Sbjct: 61  AGAFFSALASTDAALAAQQIADVAAAAAGADDNRGLALLLPIAPAIAWVLYNILQPALNQ 120

Query: 180 LNRMRSN*KQIVEIQLG 230
           LNRMRS    +  + LG
Sbjct: 121 LNRMRSEQVLVAGLGLG 137


>gb|AFW74395.1| hypothetical protein ZEAMMB73_053443, partial [Zea mays]
          Length = 184

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = +3

Query: 9   AAAGVFSPYAEDAKAQQALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQLN 185
           AAAG+ +P    A   Q L  +AA   + D RG L+ +V+APA+GWVLFNILQPALNQLN
Sbjct: 120 AAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLN 179

Query: 186 RMRSN 200
           RMRS+
Sbjct: 180 RMRSD 184



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +3

Query: 60  ALFDLAA-EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 230
           AL D+AA +   D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+  Q V   LG
Sbjct: 60  ALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS--QAVAAGLG 115


>gb|EEE67953.1| hypothetical protein OsJ_25851 [Oryza sativa Japonica Group]
          Length = 184

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
 Frame = +3

Query: 6   GAAAGVFSPYAEDAKAQQALFDLAAEGSS----DGRGSLIFLVLAPAVGWVLFNILQPAL 173
           GAAAG    +  +A A Q +  LAAE ++    D RG L+  V+APA+ WVL+NILQPAL
Sbjct: 116 GAAAGAGLAFPPEASAAQEVARLAAEAAAAEGGDNRGLLLLFVVAPAIAWVLYNILQPAL 175

Query: 174 NQLNRMRSN 200
           NQLNRMRS+
Sbjct: 176 NQLNRMRSD 184


>ref|NP_001147385.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195610810|gb|ACG27235.1| photosystem II core complex
           proteins psbY [Zea mays] gi|413941745|gb|AFW74394.1|
           photosystem II core complex protein psbY [Zea mays]
          Length = 191

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = +3

Query: 9   AAAGVFSPYAEDAKAQQALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQLN 185
           AAAG+ +P    A   Q L  +AA   + D RG L+ +V+APA+GWVLFNILQPALNQLN
Sbjct: 127 AAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLN 186

Query: 186 RMRSN 200
           RMRS+
Sbjct: 187 RMRSD 191



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +3

Query: 60  ALFDLAA-EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 230
           AL D+AA +   D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+  Q V   LG
Sbjct: 67  ALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS--QAVAAGLG 122


>ref|NP_001060874.1| Os08g0119800 [Oryza sativa Japonica Group]
           gi|113622843|dbj|BAF22788.1| Os08g0119800, partial
           [Oryza sativa Japonica Group]
          Length = 216

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
 Frame = +3

Query: 6   GAAAGVFSPYAEDAKAQQALFDLAAEGSS----DGRGSLIFLVLAPAVGWVLFNILQPAL 173
           GAAAG    +  +A A Q +  LAAE ++    D RG L+  V+APA+ WVL+NILQPAL
Sbjct: 148 GAAAGAGLAFPPEASAAQEVARLAAEAAAAEGGDNRGLLLLFVVAPAIAWVLYNILQPAL 207

Query: 174 NQLNRMRSN 200
           NQLNRMRS+
Sbjct: 208 NQLNRMRSD 216



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = +3

Query: 12  AAGVFSPYA--EDAKAQQALFDLAAE--GSSDGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           A   FS  A  + A A Q + D+AA   G+ D RG  + L +APA+ WVL+NILQPALNQ
Sbjct: 72  AGAFFSALASTDAALAAQQIADVAAAAAGADDNRGLALLLPIAPAIAWVLYNILQPALNQ 131

Query: 180 LNRMRSN*KQIVEIQLG 230
           LNRMRS    +  + LG
Sbjct: 132 LNRMRSEQVLVAGLGLG 148


>ref|XP_004135291.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Cucumis sativus]
          Length = 179

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = +3

Query: 72  LAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 197
           +AAE  SDGRG L+ +V+APA+ WVLFNILQPALNQLNRMRS
Sbjct: 137 MAAEAGSDGRGQLLLIVVAPAIAWVLFNILQPALNQLNRMRS 178



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
 Frame = +3

Query: 3   GGAAAG-VFSPYA--EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPAL 173
           G A AG +FS  +  + A A Q + DLA     D RG  + L L PAV WVLFNILQPAL
Sbjct: 48  GTAIAGAIFSTLSSGDAALAAQQIADLA---EGDNRGLALLLPLIPAVAWVLFNILQPAL 104

Query: 174 NQLNRMRSN*KQIVEIQLGPL 236
           NQ+NRMR+    IV + LG L
Sbjct: 105 NQINRMRTEKAVIVGLGLGGL 125


>ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [Sorghum bicolor]
           gi|241941317|gb|EES14462.1| hypothetical protein
           SORBIDRAFT_07g002060 [Sorghum bicolor]
          Length = 203

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/63 (57%), Positives = 42/63 (66%)
 Frame = +3

Query: 9   AAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNR 188
           A AG F      + A  A    AA+  SD RG L+  V+APA+GWVL+NILQPALNQLNR
Sbjct: 62  ALAGAFFSALASSDAALADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNR 121

Query: 189 MRS 197
           MRS
Sbjct: 122 MRS 124



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
 Frame = +3

Query: 12  AAGVFSPYAEDAKAQQALFDLAAEGSS----DGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           AAG+ SP   +A A  ++ DLAA  ++    D RG L+ +V+APA+GWVLFNILQPALNQ
Sbjct: 139 AAGMASP--PEASAAASVQDLAALAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQ 196

Query: 180 LNRMRSN 200
           LNRMRS+
Sbjct: 197 LNRMRSD 203


>gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays]
          Length = 196

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
 Frame = +3

Query: 3   GGAAAGVFS-PYAEDAKAQQALFDLAAEGSS-----DGRGSLIFLVLAPAVGWVLFNILQ 164
           G AAAG+ + P A  A A Q L  LAA  ++     D RG L+ +V+ PA+GWVLFNILQ
Sbjct: 125 GAAAAGMAAAPEASAAAAAQDLAALAAAAAAAAPADDNRGLLLLIVVTPAIGWVLFNILQ 184

Query: 165 PALNQLNRMRSN 200
           PALNQ+NRM+S+
Sbjct: 185 PALNQINRMKSD 196



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
 Frame = +3

Query: 12  AAGVFSPYAED--AKAQQALFDLAA--EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           A   FS  A    A A Q + D+AA  +  SD RG L+  V+APA+GWVL+NILQPALNQ
Sbjct: 50  AGAFFSALASSDAALAAQRVADVAAAADSGSDNRGQLLLFVVAPAIGWVLYNILQPALNQ 109

Query: 180 LNRMRS 197
           LNRMRS
Sbjct: 110 LNRMRS 115


>ref|NP_001147739.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195613400|gb|ACG28530.1| photosystem II core complex
           proteins psbY [Zea mays]
          Length = 196

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
 Frame = +3

Query: 3   GGAAAGVFS-PYAEDAKAQQALFDLAAEGSS-----DGRGSLIFLVLAPAVGWVLFNILQ 164
           G AAAG+ + P A  A A Q L  LAA  ++     D RG L+ +V+ PA+GWVLFNILQ
Sbjct: 125 GAAAAGMAAAPEASAAAAAQDLAALAAAAAAAAPADDNRGLLLLIVVTPAIGWVLFNILQ 184

Query: 165 PALNQLNRMRSN 200
           PALNQ+NRM+S+
Sbjct: 185 PALNQINRMKSD 196



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
 Frame = +3

Query: 12  AAGVFSPYAED--AKAQQALFDLAA--EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQ 179
           A   FS  A    A A Q + D+AA  +  SD RG L+  V+APA+GWVL+NILQPALNQ
Sbjct: 50  AGAFFSALASSDAALAAQRVADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQ 109

Query: 180 LNRMRS 197
           LNRMRS
Sbjct: 110 LNRMRS 115


>ref|XP_004972988.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Setaria italica]
          Length = 197

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = +3

Query: 36  AEDAKAQQALFDLAA-EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 197
           ++ A A Q + D+AA +  SD RG L+  V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 64  SDAALAAQRVADVAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 118



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQ----QALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPA 170
           G AA       A +A A      AL   AA  + D RG L+ +V+APA+GWVLFNILQPA
Sbjct: 128 GAAATAAGMACAPEASAAVQDLAALAAAAAAPADDNRGLLLLIVVAPAIGWVLFNILQPA 187

Query: 171 LNQLNRMRSN 200
           LNQLNRMRS+
Sbjct: 188 LNQLNRMRSD 197


>ref|XP_004142959.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Cucumis sativus]
           gi|449494514|ref|XP_004159566.1| PREDICTED: photosystem
           II core complex proteins psbY, chloroplastic-like
           [Cucumis sativus]
          Length = 253

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 38/65 (58%), Positives = 44/65 (67%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           GG  A  F  YA DA A +    +A   SSD RG L+  V+APA+ WVL+NILQPALNQL
Sbjct: 190 GGLTASGFM-YAPDASASEIAM-IADASSSDSRGQLLLFVVAPAILWVLYNILQPALNQL 247

Query: 183 NRMRS 197
           NRMRS
Sbjct: 248 NRMRS 252



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/67 (53%), Positives = 47/67 (70%)
 Frame = +3

Query: 36  AEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIV 215
           ++ A A Q + ++AA+G  D RG  + L L PAV WVLFNILQPALNQ+NRMRS+   I+
Sbjct: 128 SDPAFAAQQIAEIAADG--DNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDKGVII 185

Query: 216 EIQLGPL 236
            + LG L
Sbjct: 186 GLGLGGL 192


>ref|NP_001235479.1| uncharacterized protein LOC100500004 [Glycine max]
           gi|255628451|gb|ACU14570.1| unknown [Glycine max]
          Length = 192

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/65 (53%), Positives = 44/65 (67%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           GG A  V +P+A  A A +    +A   S+D RG L+  V+ PA+ WVL+NILQPALNQL
Sbjct: 128 GGLAGLVAAPHASAAAASEVAA-MAEAASNDNRGQLLLFVVTPAIAWVLYNILQPALNQL 186

Query: 183 NRMRS 197
           NRMRS
Sbjct: 187 NRMRS 191



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/79 (46%), Positives = 44/79 (55%)
 Frame = +3

Query: 9   AAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNR 188
           A AG          A  A+  +A     D RG  + L + PA+GWVLFNILQPALNQLNR
Sbjct: 55  AIAGAIFTTLGTCDAAFAVQQIADIAEGDNRGLALLLPIIPAIGWVLFNILQPALNQLNR 114

Query: 189 MRSN*KQIVEIQLGPLPSL 245
           MRS    I+ + LG L  L
Sbjct: 115 MRSTKGVIIGLGLGGLAGL 133


>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
           [Ricinus communis] gi|223546085|gb|EEF47588.1|
           photosystem II core complex proteins psbY, chloroplast
           precursor [Ricinus communis]
          Length = 195

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 35/65 (53%), Positives = 46/65 (70%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           GG AA  F   A +A A + +  + A+ +SD RG L+  V+APA+ WVL+NILQPALNQ+
Sbjct: 131 GGLAATGFMAAAPEASASENIA-MIADAASDNRGQLLLFVVAPAILWVLYNILQPALNQI 189

Query: 183 NRMRS 197
           NRMRS
Sbjct: 190 NRMRS 194



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/78 (42%), Positives = 41/78 (52%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           G A AG             A   +A     D RG  + L + PA+GWVLFNIL+PALNQ+
Sbjct: 56  GTAIAGAIFSTLSSCDPAFAAQQIAEIAEGDNRGLALLLPIIPALGWVLFNILRPALNQI 115

Query: 183 NRMRSN*KQIVEIQLGPL 236
           NRMR     I+ + LG L
Sbjct: 116 NRMRETKGVIIGLGLGGL 133


>ref|XP_002312650.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
           gi|222852470|gb|EEE90017.1| Photosystem II core complex
           proteins psbY [Populus trichocarpa]
          Length = 192

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/65 (53%), Positives = 47/65 (72%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           GG AA  F    + + ++ A+    AE +SD RG+L+ LV+APA+ WVL+NILQPALNQ+
Sbjct: 131 GGLAASGFMSTPDASASEIAMI---AEATSDSRGTLLLLVVAPAILWVLYNILQPALNQI 187

Query: 183 NRMRS 197
           NRMRS
Sbjct: 188 NRMRS 192



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/78 (43%), Positives = 41/78 (52%)
 Frame = +3

Query: 3   GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQL 182
           G A AG         +   A   +A     D RG  + L L PA+ WVLFNILQPALNQ+
Sbjct: 56  GTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQV 115

Query: 183 NRMRSN*KQIVEIQLGPL 236
           NRMR     I+ + LG L
Sbjct: 116 NRMRETRGVIIGLGLGGL 133