BLASTX nr result

ID: Ephedra25_contig00000474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00000474
         (657 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24716.1| unknown [Picea sitchensis]                              72   1e-10
gb|ACN40020.1| unknown [Picea sitchensis]                              66   1e-08

>gb|ABK24716.1| unknown [Picea sitchensis]
          Length = 420

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
 Frame = -3

Query: 409 ALSSTISGSMIAQGIGLERSSFLLKNPSSRRVSAAYSAKSCQKLDSLQIGSAAGLRSSLQ 230
           A ++ + GS + +G   +R++  L    S+       +K  +K  SL +G    L S+L 
Sbjct: 3   ASTNMMFGSTLCKGSVPDRTTISLPISCSQ---INVLSKINRKPRSLPVGGLIRLSSALD 59

Query: 229 CRSMNWGSSY-----LGLGLESKPLRRTGLKVEAKAYEASSSDFESGS-IXXXXXXXXXX 68
            +++ +G S      +GLGL   PLRR G  V+AKAYEASSSD  S S +          
Sbjct: 60  SKAI-YGQSLKLAPCVGLGLCQTPLRRIGFNVQAKAYEASSSDLVSDSDVEEEVLSENPS 118

Query: 67  XKAAFSKLKIGVYFFVWWTLNV 2
            +AA  +LKIG+YF  WWTLNV
Sbjct: 119 PQAAAQRLKIGIYFVAWWTLNV 140


>gb|ACN40020.1| unknown [Picea sitchensis]
          Length = 341

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
 Frame = -3

Query: 250 GLRSSLQCRSMNWGSSYLG------LGLESKPLRRTGLKVEAKAYEASSSDFESGS-IXX 92
           GL S+L   ++     +L       LGL   PLRR G  V+AKAYEASSSD  S S +  
Sbjct: 25  GLESTLPIAALQGACFFLSDVGVYWLGLCQTPLRRIGFNVQAKAYEASSSDLVSDSDVEE 84

Query: 91  XXXXXXXXXKAAFSKLKIGVYFFVWWTLNV 2
                    +AA  +LKIG+YF  WWTLNV
Sbjct: 85  EVLSENPSPQAAAQRLKIGIYFVAWWTLNV 114


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