BLASTX nr result

ID: Ephedra25_contig00000432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00000432
         (440 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004291976.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...    64   3e-08
emb|CAJ43618.1| methionine synthase [Plantago major]                   64   3e-08
gb|ADE75603.1| unknown [Picea sitchensis]                              64   3e-08
gb|ABR17712.1| unknown [Picea sitchensis]                              64   3e-08
ref|XP_006826346.1| hypothetical protein AMTR_s00004p00117110 [A...    62   8e-08
ref|XP_006664220.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...    60   2e-07
tpg|DAA47598.1| TPA: putative methionine synthase family protein...    60   2e-07
gb|ACN28399.1| unknown [Zea mays] gi|414869037|tpg|DAA47594.1| T...    60   2e-07
gb|ACF88327.1| unknown [Zea mays]                                      60   2e-07
ref|NP_001067313.1| Os12g0623900 [Oryza sativa Japonica Group] g...    60   3e-07
emb|CCC42221.1| vitamin-b12 independent methionine synthase [Pin...    60   3e-07
gb|ABG22093.1| 5-methyltetrahydropteroyltriglutamate-homocystein...    60   3e-07
gb|AAF26735.1| methionine synthase [Coffea arabica]                    60   4e-07
gb|ABR18027.1| unknown [Picea sitchensis]                              60   4e-07
gb|ABR16134.1| unknown [Picea sitchensis]                              60   4e-07
gb|AEO86798.1| methionine synthase [Camellia sinensis]                 59   5e-07
ref|XP_006650367.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...    59   7e-07
gb|AGT40326.1| methionine synthase [Nicotiana attenuata]               59   7e-07
ref|XP_004982263.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...    59   7e-07
ref|XP_004960257.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...    59   7e-07

>ref|XP_004291976.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase-like [Fragaria vesca subsp. vesca]
          Length = 765

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PAL+AMV+AAKQLRTQLASAK
Sbjct: 731 PDCGLKTRKYAEVKPALSAMVAAAKQLRTQLASAK 765


>emb|CAJ43618.1| methionine synthase [Plantago major]
          Length = 161

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PAL AMVSAAKQLRTQLASAK
Sbjct: 127 PDCGLKTRKYGEVKPALEAMVSAAKQLRTQLASAK 161


>gb|ADE75603.1| unknown [Picea sitchensis]
          Length = 766

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKYPEVVPALT MV+AAK LR QLASAK
Sbjct: 732 PDCGLKTRKYPEVVPALTNMVAAAKLLRAQLASAK 766


>gb|ABR17712.1| unknown [Picea sitchensis]
          Length = 766

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKYPEVVPALT MV+AAK LR QLASAK
Sbjct: 732 PDCGLKTRKYPEVVPALTNMVAAAKLLRAQLASAK 766


>ref|XP_006826346.1| hypothetical protein AMTR_s00004p00117110 [Amborella trichopoda]
           gi|548830660|gb|ERM93583.1| hypothetical protein
           AMTR_s00004p00117110 [Amborella trichopoda]
          Length = 765

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/35 (88%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EVVPALT MVSAAK LRTQLAS K
Sbjct: 731 PDCGLKTRKYSEVVPALTNMVSAAKLLRTQLASTK 765


>ref|XP_006664220.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase 1-like [Oryza brachyantha]
          Length = 766

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PALT MVSAAK +RTQLASAK
Sbjct: 732 PDCGLKTRKYTEVKPALTNMVSAAKLIRTQLASAK 766


>tpg|DAA47598.1| TPA: putative methionine synthase family protein [Zea mays]
          Length = 435

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PALT MVSAAK +RTQLASAK
Sbjct: 401 PDCGLKTRKYTEVKPALTNMVSAAKLIRTQLASAK 435


>gb|ACN28399.1| unknown [Zea mays] gi|414869037|tpg|DAA47594.1| TPA: putative
           methionine synthase family protein isoform 1 [Zea mays]
           gi|414869038|tpg|DAA47595.1| TPA: putative methionine
           synthase family protein isoform 2 [Zea mays]
          Length = 766

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PALT MVSAAK +RTQLASAK
Sbjct: 732 PDCGLKTRKYTEVKPALTNMVSAAKLIRTQLASAK 766


>gb|ACF88327.1| unknown [Zea mays]
          Length = 270

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PALT MVSAAK +RTQLASAK
Sbjct: 236 PDCGLKTRKYTEVKPALTNMVSAAKLIRTQLASAK 270


>ref|NP_001067313.1| Os12g0623900 [Oryza sativa Japonica Group]
           gi|122203088|sp|Q2QLY5.1|METE1_ORYSJ RecName:
           Full=5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase 1; AltName: Full=Cobalamin-independent
           methionine synthase 1 gi|77556631|gb|ABA99427.1|
           5-methyltetrahydropteroyltriglutamate-homocysteine
           methyltransferase, putative, expressed [Oryza sativa
           Japonica Group] gi|108862991|gb|ABG22094.1|
           5-methyltetrahydropteroyltriglutamate-homocysteine
           methyltransferase, putative, expressed [Oryza sativa
           Japonica Group] gi|113649820|dbj|BAF30332.1|
           Os12g0623900 [Oryza sativa Japonica Group]
           gi|125537469|gb|EAY83957.1| hypothetical protein
           OsI_39179 [Oryza sativa Indica Group]
           gi|125580128|gb|EAZ21274.1| hypothetical protein
           OsJ_36926 [Oryza sativa Japonica Group]
           gi|385717668|gb|AFI71269.1|
           5-methyltetrahydropteroyltriglutamate-homocysteine
           methyltransferase [Oryza sativa Japonica Group]
          Length = 766

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PALT MVSAAK +RTQLASAK
Sbjct: 732 PDCGLKTRKYNEVKPALTNMVSAAKLIRTQLASAK 766


>emb|CCC42221.1| vitamin-b12 independent methionine synthase [Pinus pinaster]
          Length = 766

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EVVPALT MV++AK LRT+LASAK
Sbjct: 732 PDCGLKTRKYDEVVPALTNMVASAKLLRTELASAK 766


>gb|ABG22093.1| 5-methyltetrahydropteroyltriglutamate-homocysteine
           methyltransferase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 716

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PALT MVSAAK +RTQLASAK
Sbjct: 682 PDCGLKTRKYNEVKPALTNMVSAAKLIRTQLASAK 716


>gb|AAF26735.1| methionine synthase [Coffea arabica]
          Length = 218

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PAL  MV+AAKQ+RTQLASAK
Sbjct: 184 PDCGLKTRKYAEVKPALQNMVAAAKQIRTQLASAK 218


>gb|ABR18027.1| unknown [Picea sitchensis]
          Length = 766

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EVVPALT MV++AK LRT+LASAK
Sbjct: 732 PDCGLKTRKYNEVVPALTNMVASAKLLRTELASAK 766


>gb|ABR16134.1| unknown [Picea sitchensis]
          Length = 766

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EVVPALT MV++AK LRT+LASAK
Sbjct: 732 PDCGLKTRKYNEVVPALTNMVASAKLLRTELASAK 766


>gb|AEO86798.1| methionine synthase [Camellia sinensis]
          Length = 765

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PAL  MV+AAKQ+RTQLASAK
Sbjct: 731 PDCGLKTRKYHEVKPALLNMVAAAKQIRTQLASAK 765


>ref|XP_006650367.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase 1-like [Oryza brachyantha]
          Length = 766

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PALT MV AAK +RTQLASAK
Sbjct: 732 PDCGLKTRKYTEVKPALTNMVDAAKLIRTQLASAK 766


>gb|AGT40326.1| methionine synthase [Nicotiana attenuata]
          Length = 765

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PAL  MVSAAK +RTQLASAK
Sbjct: 731 PDCGLKTRKYTEVKPALQNMVSAAKSIRTQLASAK 765


>ref|XP_004982263.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase-like [Setaria italica]
          Length = 765

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PALT MVSA K +RTQLASAK
Sbjct: 731 PDCGLKTRKYTEVKPALTNMVSATKLIRTQLASAK 765


>ref|XP_004960257.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase-like isoform X2 [Setaria italica]
          Length = 765

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   PDCGLKTRKYPEVVPALTAMVSAAKQLRTQLASAK 105
           PDCGLKTRKY EV PALT MVSAAK +RTQLAS K
Sbjct: 731 PDCGLKTRKYTEVKPALTNMVSAAKLIRTQLASTK 765


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