BLASTX nr result

ID: Ephedra25_contig00000285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00000285
         (2694 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006472179.1| PREDICTED: suppressor protein SRP40-like [Ci...    64   3e-07
ref|XP_006433513.1| hypothetical protein CICLE_v10001511mg [Citr...    64   3e-07

>ref|XP_006472179.1| PREDICTED: suppressor protein SRP40-like [Citrus sinensis]
          Length = 377

 Score = 64.3 bits (155), Expect = 3e-07
 Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
 Frame = -3

Query: 511 SRSLKTNTKVGGVFSNRWVAIKELLYVNRSSSEGRAETRQKDN-SFSPAKQAHKHSLXXX 335
           S S   ++  G   S RWV +K+ LY  RS SEGR+  +     SFSP  +  K      
Sbjct: 237 SASTSRSSSAGRSTSKRWVFLKDFLY--RSKSEGRSNNKFWSTISFSPINKDKKLPTTSS 294

Query: 334 XXXXXXXXXXXXXXXXXSRNVQRSPVAAPLEFQHYTGAGKNRSEEMRRKSFLPYRMDVLG 155
                                +R P  +P E  HYT A + ++EE+R+K+FLPYR  +LG
Sbjct: 295 SSSNPSNTNIKNKPVNGIAGKRRGPAPSPHEL-HYT-AKRAQAEELRKKTFLPYRQGLLG 352

Query: 154 CLGF 143
           CLGF
Sbjct: 353 CLGF 356


>ref|XP_006433513.1| hypothetical protein CICLE_v10001511mg [Citrus clementina]
           gi|557535635|gb|ESR46753.1| hypothetical protein
           CICLE_v10001511mg [Citrus clementina]
          Length = 379

 Score = 64.3 bits (155), Expect = 3e-07
 Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
 Frame = -3

Query: 511 SRSLKTNTKVGGVFSNRWVAIKELLYVNRSSSEGRAETRQKDN-SFSPAKQAHKHSLXXX 335
           S S   ++  G   S RWV +K+ LY  RS SEGR+  +     SFSP  +  K      
Sbjct: 239 SASTSRSSSAGRSTSKRWVFLKDFLY--RSKSEGRSNNKFWSTISFSPINKDKKLPTTSS 296

Query: 334 XXXXXXXXXXXXXXXXXSRNVQRSPVAAPLEFQHYTGAGKNRSEEMRRKSFLPYRMDVLG 155
                                +R P  +P E  HYT A + ++EE+R+K+FLPYR  +LG
Sbjct: 297 SSSNPSNTNIKNKPVNGIAGKRRGPAPSPHEL-HYT-AKRAQAEELRKKTFLPYRQGLLG 354

Query: 154 CLGF 143
           CLGF
Sbjct: 355 CLGF 358


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