BLASTX nr result

ID: Ephedra25_contig00000096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00000096
         (713 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006473146.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   3e-06
ref|XP_006434543.1| hypothetical protein CICLE_v10000567mg [Citr...    57   5e-06
gb|EOY16880.1| DEAD-box ATP-dependent RNA helicase 39 isoform 1 ...    57   8e-06

>ref|XP_006473146.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Citrus
           sinensis]
          Length = 637

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/71 (42%), Positives = 40/71 (56%)
 Frame = +2

Query: 500 RDDEDNDVIEKKTKRVEYXXXXXXXXXXXXXXXGAVEELNISVPTEVQALGIRAILRGQS 679
           R+ +  D  EKK K+                  GAV E++I VPTE+Q +GI A+L G+S
Sbjct: 100 REGKGEDFDEKKKKKKVVSVGSFEELGLSEEIMGAVREMDIEVPTEIQCIGIPAVLDGKS 159

Query: 680 IFLASHTGSGK 712
           + L SHTGSGK
Sbjct: 160 VVLGSHTGSGK 170


>ref|XP_006434543.1| hypothetical protein CICLE_v10000567mg [Citrus clementina]
           gi|557536665|gb|ESR47783.1| hypothetical protein
           CICLE_v10000567mg [Citrus clementina]
          Length = 637

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 30/71 (42%), Positives = 39/71 (54%)
 Frame = +2

Query: 500 RDDEDNDVIEKKTKRVEYXXXXXXXXXXXXXXXGAVEELNISVPTEVQALGIRAILRGQS 679
           R+ +  D  EKK K+                  GAV E+ I VPTE+Q +GI A+L G+S
Sbjct: 100 REGKGEDFDEKKKKKKVVSVGSFEELGLSEEIMGAVREMGIEVPTEIQCIGIPAVLDGKS 159

Query: 680 IFLASHTGSGK 712
           + L SHTGSGK
Sbjct: 160 VVLGSHTGSGK 170


>gb|EOY16880.1| DEAD-box ATP-dependent RNA helicase 39 isoform 1 [Theobroma cacao]
           gi|508724984|gb|EOY16881.1| DEAD-box ATP-dependent RNA
           helicase 39 isoform 1 [Theobroma cacao]
          Length = 617

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 27/69 (39%), Positives = 40/69 (57%)
 Frame = +2

Query: 506 DEDNDVIEKKTKRVEYXXXXXXXXXXXXXXXGAVEELNISVPTEVQALGIRAILRGQSIF 685
           D++ D  +K  KR +                GAV E+ I VPTE+Q +G+ ++L+G+S+ 
Sbjct: 97  DKEGDASDKGKKRKKGMVESFEELGLSEEVMGAVREMGIEVPTEIQCIGVPSVLQGRSVV 156

Query: 686 LASHTGSGK 712
           L SHTGSGK
Sbjct: 157 LGSHTGSGK 165


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