BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00000036
         (554 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13951.1|RBS_SINAL RecName: Full=Ribulose bisphosphate carbox...   130   2e-28
gb|ACN40281.1| unknown [Picea sitchensis]                             130   2e-28
gb|ACN40169.1| unknown [Picea sitchensis]                             130   2e-28
gb|ACN40080.1| unknown [Picea sitchensis]                             130   2e-28
gb|ACN39871.1| unknown [Picea sitchensis]                             130   2e-28
gb|ACN39774.1| unknown [Picea sitchensis]                             130   2e-28
gb|ABK26083.1| unknown [Picea sitchensis]                             130   2e-28
gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK224...   130   2e-28
gb|ABK22359.1| unknown [Picea sitchensis]                             130   2e-28
gb|ABK21852.1| unknown [Picea sitchensis]                             130   2e-28
gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK217...   130   2e-28
gb|ABK21690.1| unknown [Picea sitchensis]                             130   2e-28
gb|ABK21259.1| unknown [Picea sitchensis] gi|116779401|gb|ABK212...   130   2e-28
gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK218...   130   2e-28
ref|XP_006285820.1| hypothetical protein CARUB_v10007296mg [Caps...   129   4e-28
ref|XP_006285696.1| hypothetical protein CARUB_v10007166mg [Caps...   129   4e-28
ref|XP_006284616.1| hypothetical protein CARUB_v10005847mg [Caps...   129   4e-28
ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidops...   129   4e-28
ref|XP_002868775.1| ribulose bisphosphate carboxylase small chai...   129   4e-28
ref|XP_006405770.1| hypothetical protein EUTSA_v10027955mg [Eutr...   129   5e-28

>sp|P13951.1|RBS_SINAL RecName: Full=Ribulose bisphosphate carboxylase small chain;
           Short=RuBisCO small subunit gi|1345574|emb|CAA34458.1|
           unnamed protein product [Sinapis alba]
          Length = 82

 Score =  130 bits (328), Expect = 2e-28
 Identities = 55/74 (74%), Positives = 65/74 (87%)
 Frame = -3

Query: 549 EEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDN 370
           E G + R++G+TPGYYDGRYWTMWKLP+FGC DSA VL+E++E KKEYP AF+R IGFDN
Sbjct: 3   EHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDN 62

Query: 369 NRQVQCISFIVHKP 328
           NRQVQCISFI +KP
Sbjct: 63  NRQVQCISFIAYKP 76


>gb|ACN40281.1| unknown [Picea sitchensis]
          Length = 194

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 117 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 176

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 177 NVRQVQCISFIVHKP 191


>gb|ACN40169.1| unknown [Picea sitchensis]
          Length = 194

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 117 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 176

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 177 NVRQVQCISFIVHKP 191


>gb|ACN40080.1| unknown [Picea sitchensis]
          Length = 183

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 106 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 165

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 166 NVRQVQCISFIVHKP 180


>gb|ACN39871.1| unknown [Picea sitchensis]
          Length = 136

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 59  DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 118

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 119 NVRQVQCISFIVHKP 133


>gb|ACN39774.1| unknown [Picea sitchensis]
          Length = 136

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 59  DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 118

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 119 NVRQVQCISFIVHKP 133


>gb|ABK26083.1| unknown [Picea sitchensis]
          Length = 159

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 82  DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 141

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 142 NVRQVQCISFIVHKP 156


>gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK22499.1| unknown
           [Picea sitchensis] gi|116784603|gb|ABK23405.1| unknown
           [Picea sitchensis] gi|116793621|gb|ABK26814.1| unknown
           [Picea sitchensis] gi|116793637|gb|ABK26822.1| unknown
           [Picea sitchensis] gi|116794195|gb|ABK27041.1| unknown
           [Picea sitchensis] gi|148907673|gb|ABR16965.1| unknown
           [Picea sitchensis] gi|224285721|gb|ACN40576.1| unknown
           [Picea sitchensis]
          Length = 193

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 116 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 175

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 176 NVRQVQCISFIVHKP 190


>gb|ABK22359.1| unknown [Picea sitchensis]
          Length = 193

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 116 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 175

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 176 NVRQVQCISFIVHKP 190


>gb|ABK21852.1| unknown [Picea sitchensis]
          Length = 193

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 116 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 175

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 176 NVRQVQCISFIVHKP 190


>gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK21733.1| unknown
           [Picea sitchensis] gi|116782047|gb|ABK22347.1| unknown
           [Picea sitchensis] gi|116783228|gb|ABK22845.1| unknown
           [Picea sitchensis] gi|116785645|gb|ABK23805.1| unknown
           [Picea sitchensis] gi|116785985|gb|ABK23931.1| unknown
           [Picea sitchensis] gi|116786044|gb|ABK23949.1| unknown
           [Picea sitchensis] gi|116790039|gb|ABK25479.1| unknown
           [Picea sitchensis] gi|116793644|gb|ABK26825.1| unknown
           [Picea sitchensis] gi|224284814|gb|ACN40137.1| unknown
           [Picea sitchensis] gi|224285468|gb|ACN40456.1| unknown
           [Picea sitchensis] gi|224285619|gb|ACN40528.1| unknown
           [Picea sitchensis] gi|224285683|gb|ACN40557.1| unknown
           [Picea sitchensis]
          Length = 194

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 117 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 176

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 177 NVRQVQCISFIVHKP 191


>gb|ABK21690.1| unknown [Picea sitchensis]
          Length = 194

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 117 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 176

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 177 NVRQVQCISFIVHKP 191


>gb|ABK21259.1| unknown [Picea sitchensis] gi|116779401|gb|ABK21267.1| unknown
           [Picea sitchensis] gi|116779440|gb|ABK21283.1| unknown
           [Picea sitchensis] gi|116781990|gb|ABK22328.1| unknown
           [Picea sitchensis] gi|116782020|gb|ABK22337.1| unknown
           [Picea sitchensis] gi|116782035|gb|ABK22342.1| unknown
           [Picea sitchensis] gi|116784457|gb|ABK23349.1| unknown
           [Picea sitchensis] gi|116785630|gb|ABK23799.1| unknown
           [Picea sitchensis] gi|116786299|gb|ABK24056.1| unknown
           [Picea sitchensis] gi|116791702|gb|ABK26077.1| unknown
           [Picea sitchensis] gi|116792861|gb|ABK26530.1| unknown
           [Picea sitchensis] gi|148905732|gb|ABR16030.1| unknown
           [Picea sitchensis] gi|224284032|gb|ACN39754.1| unknown
           [Picea sitchensis] gi|224284134|gb|ACN39804.1| unknown
           [Picea sitchensis] gi|224284171|gb|ACN39822.1| unknown
           [Picea sitchensis] gi|224284301|gb|ACN39886.1| unknown
           [Picea sitchensis] gi|224284342|gb|ACN39906.1| unknown
           [Picea sitchensis] gi|224284389|gb|ACN39929.1| unknown
           [Picea sitchensis] gi|224284796|gb|ACN40128.1| unknown
           [Picea sitchensis] gi|224284941|gb|ACN40200.1| unknown
           [Picea sitchensis] gi|224284998|gb|ACN40228.1| unknown
           [Picea sitchensis] gi|224285010|gb|ACN40234.1| unknown
           [Picea sitchensis] gi|224285109|gb|ACN40282.1| unknown
           [Picea sitchensis] gi|224285123|gb|ACN40289.1| unknown
           [Picea sitchensis] gi|224285656|gb|ACN40544.1| unknown
           [Picea sitchensis] gi|224285893|gb|ACN40660.1| unknown
           [Picea sitchensis]
          Length = 194

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 117 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 176

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 177 NVRQVQCISFIVHKP 191


>gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK21851.1| unknown
           [Picea sitchensis] gi|148905962|gb|ABR16142.1| unknown
           [Picea sitchensis] gi|224284092|gb|ACN39783.1| unknown
           [Picea sitchensis] gi|224284864|gb|ACN40162.1| unknown
           [Picea sitchensis] gi|224285028|gb|ACN40243.1| unknown
           [Picea sitchensis]
          Length = 195

 Score =  130 bits (327), Expect = 2e-28
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = -3

Query: 552 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 373
           DE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFD
Sbjct: 118 DEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFD 177

Query: 372 NNRQVQCISFIVHKP 328
           N RQVQCISFIVHKP
Sbjct: 178 NVRQVQCISFIVHKP 192


>ref|XP_006285820.1| hypothetical protein CARUB_v10007296mg [Capsella rubella]
           gi|482554525|gb|EOA18718.1| hypothetical protein
           CARUB_v10007296mg [Capsella rubella]
          Length = 181

 Score =  129 bits (325), Expect = 4e-28
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = -3

Query: 549 EEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDN 370
           E G + R++G+TPGYYDGRYWTMWKLP+FGC DSA VL+E+EE KKEYP AF+R IGFDN
Sbjct: 102 EHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDN 161

Query: 369 NRQVQCISFIVHKP 328
            RQVQCISFI +KP
Sbjct: 162 TRQVQCISFIAYKP 175


>ref|XP_006285696.1| hypothetical protein CARUB_v10007166mg [Capsella rubella]
           gi|482554401|gb|EOA18594.1| hypothetical protein
           CARUB_v10007166mg [Capsella rubella]
          Length = 181

 Score =  129 bits (325), Expect = 4e-28
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = -3

Query: 549 EEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDN 370
           E G + R++G+TPGYYDGRYWTMWKLP+FGC DSA VL+E+EE KKEYP AF+R IGFDN
Sbjct: 102 EHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDN 161

Query: 369 NRQVQCISFIVHKP 328
            RQVQCISFI +KP
Sbjct: 162 TRQVQCISFIAYKP 175


>ref|XP_006284616.1| hypothetical protein CARUB_v10005847mg [Capsella rubella]
           gi|482553321|gb|EOA17514.1| hypothetical protein
           CARUB_v10005847mg [Capsella rubella]
          Length = 181

 Score =  129 bits (325), Expect = 4e-28
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = -3

Query: 549 EEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDN 370
           E G + R++G+TPGYYDGRYWTMWKLP+FGC DSA VL+E+EE KKEYP AF+R IGFDN
Sbjct: 102 EHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDN 161

Query: 369 NRQVQCISFIVHKP 328
            RQVQCISFI +KP
Sbjct: 162 TRQVQCISFIAYKP 175


>ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidopsis lyrata subsp.
           lyrata] gi|297314612|gb|EFH45035.1| ribulose
           bisphosphate carboxylase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 181

 Score =  129 bits (325), Expect = 4e-28
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = -3

Query: 549 EEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDN 370
           E G + R++G TPGYYDGRYWTMWKLP+FGC DSA VL+E++E KKEYP AF+R IGFDN
Sbjct: 102 EHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDN 161

Query: 369 NRQVQCISFIVHKP 328
           NRQVQCISFI +KP
Sbjct: 162 NRQVQCISFIAYKP 175


>ref|XP_002868775.1| ribulose bisphosphate carboxylase small chain 1B [Arabidopsis
           lyrata subsp. lyrata] gi|297314611|gb|EFH45034.1|
           ribulose bisphosphate carboxylase small chain 1B
           [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score =  129 bits (325), Expect = 4e-28
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = -3

Query: 549 EEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDN 370
           E G + R++G TPGYYDGRYWTMWKLP+FGC DSA VL+E++E KKEYP AF+R IGFDN
Sbjct: 102 EHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDN 161

Query: 369 NRQVQCISFIVHKP 328
           NRQVQCISFI +KP
Sbjct: 162 NRQVQCISFIAYKP 175


>ref|XP_006405770.1| hypothetical protein EUTSA_v10027955mg [Eutrema salsugineum]
           gi|557106908|gb|ESQ47223.1| hypothetical protein
           EUTSA_v10027955mg [Eutrema salsugineum]
          Length = 181

 Score =  129 bits (324), Expect = 5e-28
 Identities = 54/74 (72%), Positives = 65/74 (87%)
 Frame = -3

Query: 549 EEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDN 370
           E G + R++G+TPGYYDGRYWTMWKLP+FGC DSA VL+E++E KKEYP+AF+R IGFDN
Sbjct: 102 ENGFVHREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPQAFIRIIGFDN 161

Query: 369 NRQVQCISFIVHKP 328
            RQVQCISFI +KP
Sbjct: 162 TRQVQCISFIAYKP 175