BLASTX nr result

ID: Dioscorea21_contig00040181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040181
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003581370.1| PREDICTED: uncharacterized protein LOC100843...    65   8e-09
ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...    65   8e-09
ref|XP_004159806.1| PREDICTED: uncharacterized protein LOC101227...    64   1e-08
gb|EEE61227.1| hypothetical protein OsJ_15266 [Oryza sativa Japo...    59   5e-07
gb|EEC77520.1| hypothetical protein OsI_16399 [Oryza sativa Indi...    59   5e-07

>ref|XP_003581370.1| PREDICTED: uncharacterized protein LOC100843631 [Brachypodium
           distachyon]
          Length = 741

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
 Frame = -3

Query: 325 SIDKILPNAEIPYRILTLLLLGAAKIYAKKVELLYNDCNE-------ALTKINKASINEL 167
           S+DKIL + E PYRIL LLLLG  +IY+KKVE L  +C +       ALT+  +  +   
Sbjct: 41  SVDKILSDVETPYRILGLLLLGVVRIYSKKVEYLCRECEQVKLLQASALTETTENKVGRR 100

Query: 166 LMLPDEVTGTSQRKVSEKGKARVSLETTPPLAGAICEPYHG-----------ASIIIPER 20
           +       G S R V ++ +  +     PP +       +G           A  IIP+R
Sbjct: 101 VK-----KGVSARLVVDQNQQDIPKVKRPPRSVRTSRAENGVTSHDAPVDLPAIFIIPKR 155

Query: 19  FELDSF 2
           FELDSF
Sbjct: 156 FELDSF 161


>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
           gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
           protein, putative [Ricinus communis]
          Length = 781

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
 Frame = -3

Query: 325 SIDKILPNA--EIPYRILTLLLLGAAKIYAKKVELLYNDCNEALTKINKASINELLMLPD 152
           S+DKIL +    + YR+L  LLLG  +I++KKVE L++DCN+ L KI    +        
Sbjct: 40  SVDKILQDEFDAVTYRVLAYLLLGVVRIFSKKVEYLFDDCNKVLLKIKDFMV-------- 91

Query: 151 EVTGTSQRKVSEKGKARVSLETTPPLAGAICEPYHGASIIIPERFELDSF 2
                       + K R  +ET       +C PY  +SI +PERFELD+F
Sbjct: 92  ------------RNKERALMET-------LCAPY--SSITLPERFELDAF 120


>ref|XP_004159806.1| PREDICTED: uncharacterized protein LOC101227114 [Cucumis sativus]
          Length = 320

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
 Frame = -3

Query: 325 SIDKILPNA--EIPYRILTLLLLGAAKIYAKKVELLYNDCNEALTKINKASINELLMLPD 152
           S+DKIL +    + YR++  LLLG A+IY+KKVE LY DCN+ LT+IN+  +        
Sbjct: 40  SVDKILQDELNAVTYRVMAYLLLGIARIYSKKVEYLYTDCNKVLTEINEFVVR------- 92

Query: 151 EVTGTSQRKVSEKGKARVSLETTPPLAGAICEPYHGASIIIPERFELDSF 2
             T  S RK                  G    PY+  +I +PERFELD F
Sbjct: 93  --TKNSTRK------------------GTKQTPYY--AITLPERFELDEF 120


>gb|EEE61227.1| hypothetical protein OsJ_15266 [Oryza sativa Japonica Group]
          Length = 739

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -3

Query: 322 IDKILP--NAEIPYRILTLLLLGAAKIYAKKVELLYNDCNEALTKINKASINELLMLPDE 149
           +DKILP  N +  YR+L LLLLG  +IY+KKVE L ++CNE L     A  NEL +    
Sbjct: 42  VDKILPDDNDKTTYRVLGLLLLGIVRIYSKKVEYLCHECNELLGSYGSAHCNELSI---- 97

Query: 148 VTGTSQRKVSEKGKARV 98
            TG +  +VS++ K  V
Sbjct: 98  PTGGATNRVSKQAKKPV 114


>gb|EEC77520.1| hypothetical protein OsI_16399 [Oryza sativa Indica Group]
          Length = 525

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -3

Query: 322 IDKILP--NAEIPYRILTLLLLGAAKIYAKKVELLYNDCNEALTKINKASINELLMLPDE 149
           +DKILP  N +  YR+L LLLLG  +IY+KKVE L ++CNE L     A  NEL +    
Sbjct: 42  VDKILPDDNDKTTYRVLGLLLLGIVRIYSKKVEYLCHECNELLGSYGSAHCNELSI---- 97

Query: 148 VTGTSQRKVSEKGKARV 98
            TG +  +VS++ K  V
Sbjct: 98  PTGGATNRVSKQAKKPV 114


Top