BLASTX nr result

ID: Dioscorea21_contig00040172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040172
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
dbj|BAK07249.1| predicted protein [Hordeum vulgare subsp. vulgare]     89   4e-16
ref|XP_002450172.1| hypothetical protein SORBIDRAFT_05g001460 [S...    88   8e-16
ref|XP_003557865.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15

>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/60 (71%), Positives = 51/60 (85%)
 Frame = +3

Query: 6   IAANEVFKLSRDGRPGAYLALSNTLAAAGKWEDVCEVRELMRERGVSKHAGCSWVGRDKG 185
           +AA+E+FKL+ DGRPGAY+ALSN LAAAGKW+ V EVR+LM+ RGVSK  GCSWVG D G
Sbjct: 473 MAAHEIFKLNSDGRPGAYVALSNALAAAGKWDSVSEVRQLMKVRGVSKDTGCSWVGTDSG 532


>ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Glycine max]
          Length = 525

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = +3

Query: 6   IAANEVFKLSRDGRPGAYLALSNTLAAAGKWEDVCEVRELMRERGVSKHAGCSWVGRD 179
           +AANE+FKL+  GRPGAY+ALSNTLAAAGKWE V E+RE+M+ERG+SK  G SWVG D
Sbjct: 465 LAANELFKLNATGRPGAYVALSNTLAAAGKWESVTELREIMKERGISKDTGRSWVGAD 522


>dbj|BAK07249.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 304

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/59 (67%), Positives = 50/59 (84%)
 Frame = +3

Query: 3   DIAANEVFKLSRDGRPGAYLALSNTLAAAGKWEDVCEVRELMRERGVSKHAGCSWVGRD 179
           ++A+ EVF+LSR GRPGAY+A SNTLAAAGKW+ V +VRE+M++RGV K A CSWVG D
Sbjct: 240 NVASREVFELSRAGRPGAYMAFSNTLAAAGKWDGVHQVREMMKQRGVLKDAACSWVGSD 298


>ref|XP_002450172.1| hypothetical protein SORBIDRAFT_05g001460 [Sorghum bicolor]
           gi|241936015|gb|EES09160.1| hypothetical protein
           SORBIDRAFT_05g001460 [Sorghum bicolor]
          Length = 521

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/59 (67%), Positives = 49/59 (83%)
 Frame = +3

Query: 3   DIAANEVFKLSRDGRPGAYLALSNTLAAAGKWEDVCEVRELMRERGVSKHAGCSWVGRD 179
           +IA+ EVF+LSR GRPGAY+A SNTLAAAGKWE V +VRE+M++RGV K   CSWVG +
Sbjct: 457 NIASREVFELSRKGRPGAYMAFSNTLAAAGKWEGVHDVREMMKQRGVLKDTACSWVGSE 515


>ref|XP_003557865.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 521

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = +3

Query: 3   DIAANEVFKLSRDGRPGAYLALSNTLAAAGKWEDVCEVRELMRERGVSKHAGCSWVGRD 179
           ++A+ EVF LS  GRPGAY+A SNTLAAAGKW+ V +VRE+MR RGV K A CSWVG +
Sbjct: 457 NVASKEVFALSHAGRPGAYMAFSNTLAAAGKWDGVHQVREMMRSRGVLKDAACSWVGSE 515


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