BLASTX nr result

ID: Dioscorea21_contig00040160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040160
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95797.1| retrotransposon protein, putative, unclassified [...   142   3e-32
emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]         137   1e-30
gb|ABA94321.1| retrotransposon protein, putative, unclassified [...   134   1e-29
ref|NP_001172702.1| Os01g0909600 [Oryza sativa Japonica Group] g...   119   3e-25
gb|EEC72005.1| hypothetical protein OsI_04866 [Oryza sativa Indi...   119   3e-25

>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1588

 Score =  142 bits (358), Expect = 3e-32
 Identities = 60/84 (71%), Positives = 71/84 (84%)
 Frame = -3

Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73
           HCQLGH SF+SL+ L P++  KVD+  L C+ACE GKHTRSTY  IGLRS EPF L+HSD
Sbjct: 564 HCQLGHPSFESLSKLYPDLFTKVDKSRLVCDACEFGKHTRSTYAGIGLRSCEPFILIHSD 623

Query: 72  VWGPCPITSISGFRWFVTFIDCYS 1
           VWGPCP+TS+SGF+WFVTFIDCY+
Sbjct: 624 VWGPCPVTSVSGFKWFVTFIDCYT 647


>emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]
          Length = 1045

 Score =  137 bits (344), Expect = 1e-30
 Identities = 57/84 (67%), Positives = 71/84 (84%)
 Frame = -3

Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73
           HCQLGH SF+ L+ L P++  +VD+  L C+ACELGKHTRSTY  IGLR+ EPF L+HSD
Sbjct: 413 HCQLGHPSFEILSKLYPDLFSRVDKHRLVCDACELGKHTRSTYVGIGLRNCEPFILIHSD 472

Query: 72  VWGPCPITSISGFRWFVTFIDCYS 1
           VWGPCP+TS+SGF+WFVTFIDC++
Sbjct: 473 VWGPCPVTSVSGFKWFVTFIDCHT 496


>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1133

 Score =  134 bits (336), Expect = 1e-29
 Identities = 56/84 (66%), Positives = 70/84 (83%)
 Frame = -3

Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73
           HCQLGH SF+ L+ L P++  +VD+  L C+ACELGKHTRSTY  IGLR+ EPF L+HSD
Sbjct: 244 HCQLGHPSFEILSKLYPDLFSRVDKHRLVCDACELGKHTRSTYVGIGLRNCEPFILIHSD 303

Query: 72  VWGPCPITSISGFRWFVTFIDCYS 1
           VW PCP+TS+SGF+WFVTFIDC++
Sbjct: 304 VWEPCPVTSVSGFKWFVTFIDCHT 327


>ref|NP_001172702.1| Os01g0909600 [Oryza sativa Japonica Group]
           gi|255673983|dbj|BAH91432.1| Os01g0909600 [Oryza sativa
           Japonica Group]
          Length = 331

 Score =  119 bits (298), Expect = 3e-25
 Identities = 49/84 (58%), Positives = 65/84 (77%)
 Frame = -3

Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73
           HC+LGH SFD+++ L P +   V++  L C+ACE GKHTR+ Y   GLRS+EPF L+H D
Sbjct: 221 HCRLGHPSFDNVSKLYPILFNGVNKSRLVCDACEFGKHTRTPYVGSGLRSYEPFILIHYD 280

Query: 72  VWGPCPITSISGFRWFVTFIDCYS 1
           VWGP P+T +SGF+WFV+FIDCY+
Sbjct: 281 VWGPWPVTLVSGFKWFVSFIDCYT 304


>gb|EEC72005.1| hypothetical protein OsI_04866 [Oryza sativa Indica Group]
          Length = 285

 Score =  119 bits (298), Expect = 3e-25
 Identities = 49/84 (58%), Positives = 65/84 (77%)
 Frame = -3

Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73
           HC+LGH SFD+++ L P +   V++  L C+ACE GKHTR+ Y   GLRS+EPF L+H D
Sbjct: 175 HCRLGHPSFDNVSKLYPILFNGVNKSRLVCDACEFGKHTRTPYVGSGLRSYEPFILIHYD 234

Query: 72  VWGPCPITSISGFRWFVTFIDCYS 1
           VWGP P+T +SGF+WFV+FIDCY+
Sbjct: 235 VWGPWPVTLVSGFKWFVSFIDCYT 258


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