BLASTX nr result
ID: Dioscorea21_contig00040160
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00040160 (257 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA95797.1| retrotransposon protein, putative, unclassified [... 142 3e-32 emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group] 137 1e-30 gb|ABA94321.1| retrotransposon protein, putative, unclassified [... 134 1e-29 ref|NP_001172702.1| Os01g0909600 [Oryza sativa Japonica Group] g... 119 3e-25 gb|EEC72005.1| hypothetical protein OsI_04866 [Oryza sativa Indi... 119 3e-25 >gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1588 Score = 142 bits (358), Expect = 3e-32 Identities = 60/84 (71%), Positives = 71/84 (84%) Frame = -3 Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73 HCQLGH SF+SL+ L P++ KVD+ L C+ACE GKHTRSTY IGLRS EPF L+HSD Sbjct: 564 HCQLGHPSFESLSKLYPDLFTKVDKSRLVCDACEFGKHTRSTYAGIGLRSCEPFILIHSD 623 Query: 72 VWGPCPITSISGFRWFVTFIDCYS 1 VWGPCP+TS+SGF+WFVTFIDCY+ Sbjct: 624 VWGPCPVTSVSGFKWFVTFIDCYT 647 >emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group] Length = 1045 Score = 137 bits (344), Expect = 1e-30 Identities = 57/84 (67%), Positives = 71/84 (84%) Frame = -3 Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73 HCQLGH SF+ L+ L P++ +VD+ L C+ACELGKHTRSTY IGLR+ EPF L+HSD Sbjct: 413 HCQLGHPSFEILSKLYPDLFSRVDKHRLVCDACELGKHTRSTYVGIGLRNCEPFILIHSD 472 Query: 72 VWGPCPITSISGFRWFVTFIDCYS 1 VWGPCP+TS+SGF+WFVTFIDC++ Sbjct: 473 VWGPCPVTSVSGFKWFVTFIDCHT 496 >gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1133 Score = 134 bits (336), Expect = 1e-29 Identities = 56/84 (66%), Positives = 70/84 (83%) Frame = -3 Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73 HCQLGH SF+ L+ L P++ +VD+ L C+ACELGKHTRSTY IGLR+ EPF L+HSD Sbjct: 244 HCQLGHPSFEILSKLYPDLFSRVDKHRLVCDACELGKHTRSTYVGIGLRNCEPFILIHSD 303 Query: 72 VWGPCPITSISGFRWFVTFIDCYS 1 VW PCP+TS+SGF+WFVTFIDC++ Sbjct: 304 VWEPCPVTSVSGFKWFVTFIDCHT 327 >ref|NP_001172702.1| Os01g0909600 [Oryza sativa Japonica Group] gi|255673983|dbj|BAH91432.1| Os01g0909600 [Oryza sativa Japonica Group] Length = 331 Score = 119 bits (298), Expect = 3e-25 Identities = 49/84 (58%), Positives = 65/84 (77%) Frame = -3 Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73 HC+LGH SFD+++ L P + V++ L C+ACE GKHTR+ Y GLRS+EPF L+H D Sbjct: 221 HCRLGHPSFDNVSKLYPILFNGVNKSRLVCDACEFGKHTRTPYVGSGLRSYEPFILIHYD 280 Query: 72 VWGPCPITSISGFRWFVTFIDCYS 1 VWGP P+T +SGF+WFV+FIDCY+ Sbjct: 281 VWGPWPVTLVSGFKWFVSFIDCYT 304 >gb|EEC72005.1| hypothetical protein OsI_04866 [Oryza sativa Indica Group] Length = 285 Score = 119 bits (298), Expect = 3e-25 Identities = 49/84 (58%), Positives = 65/84 (77%) Frame = -3 Query: 252 HCQLGHLSFDSLNSLEPEIMKKVDRKELFCNACELGKHTRSTYKMIGLRSFEPFALVHSD 73 HC+LGH SFD+++ L P + V++ L C+ACE GKHTR+ Y GLRS+EPF L+H D Sbjct: 175 HCRLGHPSFDNVSKLYPILFNGVNKSRLVCDACEFGKHTRTPYVGSGLRSYEPFILIHYD 234 Query: 72 VWGPCPITSISGFRWFVTFIDCYS 1 VWGP P+T +SGF+WFV+FIDCY+ Sbjct: 235 VWGPWPVTLVSGFKWFVSFIDCYT 258