BLASTX nr result

ID: Dioscorea21_contig00040158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040158
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553154.1| PREDICTED: uncharacterized protein LOC100790...    65   6e-09
ref|XP_003538352.1| PREDICTED: uncharacterized protein LOC100781...    64   2e-08
ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vi...    58   7e-07
sp|Q8GT66.1|TIC40_PEA RecName: Full=Protein TIC 40, chloroplasti...    58   9e-07
emb|CAB50925.1| translocon Tic40 [Pisum sativum]                       55   5e-06

>ref|XP_003553154.1| PREDICTED: uncharacterized protein LOC100790904 [Glycine max]
          Length = 432

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/89 (37%), Positives = 54/89 (60%)
 Frame = +2

Query: 20  EKLEMQDSANVASQGTVQTITSSINPQIXXXXXXXXXXXXXXWIGVGIGISAAFNTMATR 199
           EKL ++  A+++S  T +  ++ +NPQ+              WIGVG+G+SA F+ +A+R
Sbjct: 67  EKLIVKHFASISSSNTQEATSTGVNPQLSPSSTIGSPLF---WIGVGVGLSALFSVVASR 123

Query: 200 LKRMAILKAFKEVMGPNSQQDGTFNTAAF 286
           LK+ A+ +AFK +MG  + Q+  F  AAF
Sbjct: 124 LKKYAMQQAFKTMMGQMNSQNNQFGNAAF 152


>ref|XP_003538352.1| PREDICTED: uncharacterized protein LOC100781154 [Glycine max]
          Length = 429

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/89 (37%), Positives = 53/89 (59%)
 Frame = +2

Query: 20  EKLEMQDSANVASQGTVQTITSSINPQIXXXXXXXXXXXXXXWIGVGIGISAAFNTMATR 199
           EKL ++  A+++S  T +T +  + PQ+              WIGVG+G+SA F+ +A+R
Sbjct: 62  EKLIVKHFASISSSNTQETTSIGVKPQLSPSPSSTIGSPLF-WIGVGVGLSALFSVVASR 120

Query: 200 LKRMAILKAFKEVMGPNSQQDGTFNTAAF 286
           LK+ A+ +AFK +MG  + Q+  F  AAF
Sbjct: 121 LKKYAMQQAFKTMMGQMNSQNNQFGNAAF 149


>ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vitis vinifera]
           gi|296089465|emb|CBI39284.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/82 (37%), Positives = 44/82 (53%)
 Frame = +2

Query: 41  SANVASQGTVQTITSSINPQIXXXXXXXXXXXXXXWIGVGIGISAAFNTMATRLKRMAIL 220
           S + +SQGT       +NPQ               WIGVG+G+SA F+ +A+ LK+ A+ 
Sbjct: 71  SISSSSQGTSSV---GVNPQFSPPPPSSNIGSPLFWIGVGVGLSALFSWVASNLKKYAMQ 127

Query: 221 KAFKEVMGPNSQQDGTFNTAAF 286
           +AFK +MG    Q+  FNT  F
Sbjct: 128 QAFKTLMGQMDSQNNQFNTTTF 149


>sp|Q8GT66.1|TIC40_PEA RecName: Full=Protein TIC 40, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 40; Short=PsTIC40; Flags: Precursor
           gi|26000725|gb|AAN75219.1| chloroplast protein
           translocon component Tic40 precursor [Pisum sativum]
          Length = 436

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/88 (31%), Positives = 51/88 (57%)
 Frame = +2

Query: 23  KLEMQDSANVASQGTVQTITSSINPQIXXXXXXXXXXXXXXWIGVGIGISAAFNTMATRL 202
           K+   D A+++S    +T +  ++PQ+              WIG+G+G SA F+ +A+R+
Sbjct: 65  KVNAHDFASISSSNGQETTSVGVSPQLSPPPPSTVGSPLF-WIGIGVGFSALFSVVASRV 123

Query: 203 KRMAILKAFKEVMGPNSQQDGTFNTAAF 286
           K+ A+ +AFK +MG  + Q+  F++ AF
Sbjct: 124 KKYAMQQAFKSMMGQMNTQNNPFDSGAF 151


>emb|CAB50925.1| translocon Tic40 [Pisum sativum]
          Length = 436

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/88 (30%), Positives = 50/88 (56%)
 Frame = +2

Query: 23  KLEMQDSANVASQGTVQTITSSINPQIXXXXXXXXXXXXXXWIGVGIGISAAFNTMATRL 202
           K+     A+++S    +T +  ++PQ+              WIG+G+G SA F+ +A+R+
Sbjct: 65  KVNAHSFASISSSNGQETTSVGVSPQLSPPPPSTVGSPLF-WIGIGVGFSALFSVVASRV 123

Query: 203 KRMAILKAFKEVMGPNSQQDGTFNTAAF 286
           K+ A+ +AFK +MG  + Q+  F++ AF
Sbjct: 124 KKYAMQQAFKSMMGQMNTQNNPFDSGAF 151


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