BLASTX nr result

ID: Dioscorea21_contig00040120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040120
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002438429.1| hypothetical protein SORBIDRAFT_10g019350 [S...    63   2e-08
emb|CBI34167.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002274474.1| PREDICTED: cellulose synthase-like protein D...    60   2e-07
emb|CAN81744.1| hypothetical protein VITISV_002604 [Vitis vinifera]    60   2e-07
ref|NP_180869.1| cellulose synthase-like protein D1 [Arabidopsis...    55   8e-06

>ref|XP_002438429.1| hypothetical protein SORBIDRAFT_10g019350 [Sorghum bicolor]
           gi|241916652|gb|EER89796.1| hypothetical protein
           SORBIDRAFT_10g019350 [Sorghum bicolor]
          Length = 1057

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/69 (49%), Positives = 38/69 (55%)
 Frame = -3

Query: 214 SPTTKPPVKFARRTSSGXXXXXXXXXXXXXXXSGEFTASTSGGPNDYMNYTVLMPPTPDN 35
           S  +K PV   RR SSG                 EFT++ SGG +DY NYTVLMPPTPDN
Sbjct: 6   SSASKTPVNSTRRPSSGRLPSISNDVDVEDEP--EFTSTMSGGGSDYANYTVLMPPTPDN 63

Query: 34  QPYLASSGA 8
           QPY    GA
Sbjct: 64  QPYSGGGGA 72


>emb|CBI34167.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/72 (51%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -3

Query: 214 SPTTKPP--VKFARRTSSGXXXXXXXXXXXXXXXSGEFTASTSGGPNDYMNYTVLMPPTP 41
           S   +PP  VKF RRTSSG                G+F+     G NDY+NYTVLMPPTP
Sbjct: 18  SSVGRPPQAVKFGRRTSSGRVLSLSRDDDMDLS--GDFS-----GNNDYINYTVLMPPTP 70

Query: 40  DNQPYLASSGAS 5
           DNQP  ASSG S
Sbjct: 71  DNQPMEASSGGS 82


>ref|XP_002274474.1| PREDICTED: cellulose synthase-like protein D1-like [Vitis vinifera]
          Length = 1043

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/72 (51%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -3

Query: 214 SPTTKPP--VKFARRTSSGXXXXXXXXXXXXXXXSGEFTASTSGGPNDYMNYTVLMPPTP 41
           S   +PP  VKF RRTSSG                G+F+     G NDY+NYTVLMPPTP
Sbjct: 18  SSVGRPPQAVKFGRRTSSGRVLSLSRDDDMDLS--GDFS-----GNNDYINYTVLMPPTP 70

Query: 40  DNQPYLASSGAS 5
           DNQP  ASSG S
Sbjct: 71  DNQPMEASSGGS 82


>emb|CAN81744.1| hypothetical protein VITISV_002604 [Vitis vinifera]
          Length = 1003

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/72 (51%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -3

Query: 214 SPTTKPP--VKFARRTSSGXXXXXXXXXXXXXXXSGEFTASTSGGPNDYMNYTVLMPPTP 41
           S   +PP  VKF RRTSSG                G+F+     G NDY+NYTVLMPPTP
Sbjct: 18  SSVGRPPQAVKFGRRTSSGRVLSLSRDDDMDLS--GDFS-----GNNDYINYTVLMPPTP 70

Query: 40  DNQPYLASSGAS 5
           DNQP  ASSG S
Sbjct: 71  DNQPMEASSGGS 82


>ref|NP_180869.1| cellulose synthase-like protein D1 [Arabidopsis thaliana]
           gi|75219583|sp|O49323.1|CSLD1_ARATH RecName:
           Full=Cellulose synthase-like protein D1; Short=AtCslD1
           gi|2924781|gb|AAC04910.1| putative cellulose synthase
           [Arabidopsis thaliana] gi|330253691|gb|AEC08785.1|
           cellulose synthase-like protein D1 [Arabidopsis
           thaliana]
          Length = 1036

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -3

Query: 217 ASPTTKPP--VKFARRTSSGXXXXXXXXXXXXXXXSGEFTASTSGGPNDYMNYTVLMPPT 44
           +S  ++PP  VKF RRTSSG                G+++     G NDY+NYTVLMPPT
Sbjct: 14  SSSLSRPPQAVKFGRRTSSGRIVSLSRDDDMDVS--GDYS-----GQNDYINYTVLMPPT 66

Query: 43  PDNQPYLASSGAST 2
           PDNQP  A S  ST
Sbjct: 67  PDNQP--AGSSGST 78


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