BLASTX nr result

ID: Dioscorea21_contig00040072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040072
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303416.1| predicted protein [Populus trichocarpa] gi|2...   201   7e-50
gb|AEZ55686.1| putative 1-deoxy-D-xylulose 5-phosphate synthase ...   200   1e-49
gb|ACQ76754.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacopa m...   199   1e-49
ref|XP_002532384.1| 1-deoxyxylulose-5-phosphate synthase, putati...   198   3e-49
emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanth...   197   6e-49

>ref|XP_002303416.1| predicted protein [Populus trichocarpa] gi|222840848|gb|EEE78395.1|
           predicted protein [Populus trichocarpa]
          Length = 692

 Score =  201 bits (510), Expect = 7e-50
 Identities = 100/109 (91%), Positives = 104/109 (95%)
 Frame = +1

Query: 1   QTSGLAGFPKRDESVYDAFGVGHSSTSISAGLGMAVARDLLGKKNHVVAVIGDGAMTAGQ 180
           +TSGLAGFPKRDESVYDAFG GHSSTSISAGLGMAVARDLLGK NHV++VIGDGAMTAGQ
Sbjct: 138 KTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDLLGKSNHVISVIGDGAMTAGQ 197

Query: 181 AYEAMNNTGFLDSNLIVVLNDNKQVSLPTATLDGPALPVGALSSALTKL 327
           AYEAMNN GFLDSNLIV+LNDNKQVSLPTATLDGPA PVGALSS LTKL
Sbjct: 198 AYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSTLTKL 246


>gb|AEZ55686.1| putative 1-deoxy-D-xylulose 5-phosphate synthase of [Salvia
           miltiorrhiza]
          Length = 713

 Score =  200 bits (508), Expect = 1e-49
 Identities = 102/109 (93%), Positives = 105/109 (96%)
 Frame = +1

Query: 1   QTSGLAGFPKRDESVYDAFGVGHSSTSISAGLGMAVARDLLGKKNHVVAVIGDGAMTAGQ 180
           QTSGLAGFPKRDESV+DAFGVGHSSTSISAGLGMAVARDLLGK N VV+VIGDGAMTAGQ
Sbjct: 160 QTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKDNSVVSVIGDGAMTAGQ 219

Query: 181 AYEAMNNTGFLDSNLIVVLNDNKQVSLPTATLDGPALPVGALSSALTKL 327
           AYEAMNN GFLDSNLI+VLNDNKQVSLPTATLDGPA PVGALSSALTKL
Sbjct: 220 AYEAMNNAGFLDSNLIIVLNDNKQVSLPTATLDGPATPVGALSSALTKL 268


>gb|ACQ76754.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacopa monnieri]
          Length = 121

 Score =  199 bits (507), Expect = 1e-49
 Identities = 101/109 (92%), Positives = 105/109 (96%)
 Frame = +1

Query: 1   QTSGLAGFPKRDESVYDAFGVGHSSTSISAGLGMAVARDLLGKKNHVVAVIGDGAMTAGQ 180
           +TSGLAGFPKRDES YDAFGVGHSSTSISAGLGMA+ARDLLGK N+VV+VIGDGAMTAGQ
Sbjct: 4   KTSGLAGFPKRDESAYDAFGVGHSSTSISAGLGMAIARDLLGKHNNVVSVIGDGAMTAGQ 63

Query: 181 AYEAMNNTGFLDSNLIVVLNDNKQVSLPTATLDGPALPVGALSSALTKL 327
           AYEAMNN GFLDSNLIVVLNDNKQVSLPTATLDGPA PVGALSSALTKL
Sbjct: 64  AYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSSALTKL 112


>ref|XP_002532384.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
           gi|223527908|gb|EEF29996.1| 1-deoxyxylulose-5-phosphate
           synthase, putative [Ricinus communis]
          Length = 714

 Score =  198 bits (504), Expect = 3e-49
 Identities = 98/109 (89%), Positives = 105/109 (96%)
 Frame = +1

Query: 1   QTSGLAGFPKRDESVYDAFGVGHSSTSISAGLGMAVARDLLGKKNHVVAVIGDGAMTAGQ 180
           +TSGLAGFPKRDESV+DAFG GHSSTSISAGLGMAVARDLLGK NHV++VIGDGAMTAGQ
Sbjct: 161 KTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLGKNNHVISVIGDGAMTAGQ 220

Query: 181 AYEAMNNTGFLDSNLIVVLNDNKQVSLPTATLDGPALPVGALSSALTKL 327
           AYEAMNN G+LDSNLIV+LNDNKQVSLPTATLDGPA PVGALSSALTK+
Sbjct: 221 AYEAMNNAGYLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSALTKI 269


>emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus]
          Length = 716

 Score =  197 bits (502), Expect = 6e-49
 Identities = 98/109 (89%), Positives = 105/109 (96%)
 Frame = +1

Query: 1   QTSGLAGFPKRDESVYDAFGVGHSSTSISAGLGMAVARDLLGKKNHVVAVIGDGAMTAGQ 180
           QTSGLAGFPKRDES+YDAFG GHSSTSISAGLGMAVARD+LGK N+V++VIGDGAMTAGQ
Sbjct: 163 QTSGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQ 222

Query: 181 AYEAMNNTGFLDSNLIVVLNDNKQVSLPTATLDGPALPVGALSSALTKL 327
           AYEAMNN GFLD+NLIVVLNDNKQVSLPTATLDGPA PVGALSSAL+KL
Sbjct: 223 AYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKL 271


Top