BLASTX nr result

ID: Dioscorea21_contig00040067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040067
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    67   3e-11
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    67   2e-09
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    67   2e-09
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    66   3e-09
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    64   2e-08

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 66.6 bits (161), Expect(2) = 3e-11
 Identities = 28/62 (45%), Positives = 44/62 (70%)
 Frame = -1

Query: 186 DKEITVESRGTGAFNTPEGKVKLFHDVQFIPSLEHKRLSVGQLLSNGYLILFMNDTYTIK 7
           DK++ +E +GT    T +G VK  +DVQ++P+L H  LSVGQL+++GY ++F ++   IK
Sbjct: 344 DKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIK 403

Query: 6   DK 1
           DK
Sbjct: 404 DK 405



 Score = 26.2 bits (56), Expect(2) = 3e-11
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 271 SNLFMAHCEVNDGVNFVWLGDNG 203
           S LFMA  ++ +  N VW  D+G
Sbjct: 294 SKLFMASSQITESANAVWFIDSG 316


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/62 (54%), Positives = 41/62 (66%)
 Frame = -1

Query: 186 DKEITVESRGTGAFNTPEGKVKLFHDVQFIPSLEHKRLSVGQLLSNGYLILFMNDTYTIK 7
           DK++ VE +GT A N   G VKL ++V FIPSL    LSVGQL+ +GY ILF   T  IK
Sbjct: 325 DKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIK 384

Query: 6   DK 1
           DK
Sbjct: 385 DK 386


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/62 (54%), Positives = 41/62 (66%)
 Frame = -1

Query: 186 DKEITVESRGTGAFNTPEGKVKLFHDVQFIPSLEHKRLSVGQLLSNGYLILFMNDTYTIK 7
           DK++ VE +GT A N   G VKL ++V FIPSL    LSVGQL+ +GY ILF   T  IK
Sbjct: 324 DKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIK 383

Query: 6   DK 1
           DK
Sbjct: 384 DK 385


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/62 (54%), Positives = 41/62 (66%)
 Frame = -1

Query: 186 DKEITVESRGTGAFNTPEGKVKLFHDVQFIPSLEHKRLSVGQLLSNGYLILFMNDTYTIK 7
           DK++ VE +GT A N   G VKL ++V FIPSL    LSVGQL+ +GY ILF   T  IK
Sbjct: 273 DKQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIK 332

Query: 6   DK 1
           DK
Sbjct: 333 DK 334


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/62 (53%), Positives = 40/62 (64%)
 Frame = -1

Query: 186 DKEITVESRGTGAFNTPEGKVKLFHDVQFIPSLEHKRLSVGQLLSNGYLILFMNDTYTIK 7
           DK++ VE +G  A N   G VKL ++V FIPSL    LSVGQL+ +GY ILF   T  IK
Sbjct: 339 DKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIK 398

Query: 6   DK 1
           DK
Sbjct: 399 DK 400


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