BLASTX nr result

ID: Dioscorea21_contig00040062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040062
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...    70   1e-10
gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615...    63   3e-08
ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782...    62   5e-08
emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]    56   3e-06
ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788...    55   8e-06

>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/62 (50%), Positives = 41/62 (66%)
 Frame = +3

Query: 141 GMQWLQTLGRVSHDYKAMTMDFLWHGEQISLKGEASPPARAISFNQFAALLHQEQFDSIF 320
           G+QWLQ LGRV+HDY A++M+F W G  I L G+    +  I+FNQF AL+H     S+F
Sbjct: 425 GIQWLQQLGRVAHDYAALSMEFCWEGRPIILHGDLHQSSSLITFNQFQALIHSSNVHSMF 484

Query: 321 EL 326
            L
Sbjct: 485 AL 486


>gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1|
           retrotransposon protein [Glycine max]
          Length = 1261

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/106 (32%), Positives = 53/106 (50%)
 Frame = +3

Query: 9   RVYVGNGDYLLSSTCCPKVPLILQGHIFXXXXXXXXXXXXXXXXGMQWLQTLGRVSHDYK 188
           RV VGNG+ L  +  CP+V + +Q H F                G+QWL++LG V  DY 
Sbjct: 457 RVTVGNGEELQCNQVCPEVAVHIQAHTFLVDFHILPICGADVVLGVQWLKSLGPVLTDYA 516

Query: 189 AMTMDFLWHGEQISLKGEASPPARAISFNQFAALLHQEQFDSIFEL 326
            +TM F+++ + I LKG+       IS +Q   L++     + F +
Sbjct: 517 TLTMKFIYNDKLIELKGDRDANIDQISPSQLRRLMNTGNTSTYFHI 562


>ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
          Length = 1863

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/106 (32%), Positives = 47/106 (44%)
 Frame = +3

Query: 9   RVYVGNGDYLLSSTCCPKVPLILQGHIFXXXXXXXXXXXXXXXXGMQWLQTLGRVSHDYK 188
           +V VGNG  L     CP   L+LQ H F                G++WL+TLG +  DY 
Sbjct: 349 QVMVGNGSVLECKQSCPATTLLLQQHSFTVTLRVLPISGADVVLGVEWLRTLGPIITDYT 408

Query: 189 AMTMDFLWHGEQISLKGEASPPARAISFNQFAALLHQEQFDSIFEL 326
           + TM F   G+ I L+ + +      S +Q   LLH      +F L
Sbjct: 409 SFTMQFTHLGQPIILRADVTTCTDTASAHQVKRLLHTHSLSGLFHL 454


>emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
          Length = 1308

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/108 (32%), Positives = 50/108 (46%)
 Frame = +3

Query: 6   FRVYVGNGDYLLSSTCCPKVPLILQGHIFXXXXXXXXXXXXXXXXGMQWLQTLGRVSHDY 185
           F V V NG+ L       K+ + LQG+ F                G+QWL+TLG V  D+
Sbjct: 268 FTVRVANGERLSCKGKYEKLTVNLQGNEFHLDFFSVPLNGLDMVLGIQWLETLGSVVCDW 327

Query: 186 KAMTMDFLWHGEQISLKGEASPPARAISFNQFAALLHQEQFDSIFELH 329
           K  TMDF+W  +   L+G   PP +  +   F     Q Q  ++F L+
Sbjct: 328 KKRTMDFIWEQQPKKLQGIEIPPIQDTTLQGFIKDFRQRQ--AVFALY 373


>ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
          Length = 1433

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/106 (29%), Positives = 46/106 (43%)
 Frame = +3

Query: 9   RVYVGNGDYLLSSTCCPKVPLILQGHIFXXXXXXXXXXXXXXXXGMQWLQTLGRVSHDYK 188
           RV VGNG  L  +  CP   + LQ H F                G+QWL+ LG ++ DY 
Sbjct: 393 RVLVGNGAVLTCTHLCPDTTISLQSHHFTLTFHLLPISGADVILGIQWLKLLGPITTDYT 452

Query: 189 AMTMDFLWHGEQISLKGEASPPARAISFNQFAALLHQEQFDSIFEL 326
           ++ M F   G+ + L  +A      IS  Q   ++      ++F L
Sbjct: 453 SLIMKFHHLGQPVELHVDADHGPHPISATQIKRMIQTNATSALFHL 498


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