BLASTX nr result

ID: Dioscorea21_contig00040036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040036
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29756.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...   124   8e-27
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   116   2e-24
ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like...    99   3e-19

>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/108 (57%), Positives = 76/108 (70%)
 Frame = -3

Query: 324 PVSSFMIDPLRFDSQVHIRNELGNYGDRSTSVPYCPTDRFSSPLSCSMDRPSFASTPLDR 145
           P ++  IDP+RFD+QVH+RNE GNY   +TS          S    S+DR      PL+R
Sbjct: 345 PATAVGIDPMRFDAQVHLRNEPGNYEKWNTS----------SVSFSSIDRFGVTPYPLER 394

Query: 144 EIFAPKLAEVNYIDGSTDQRWKSVDFPWTKKLEANNKKVFGNHSFRPN 1
           E + PKL EVNYI+GS+D++W S +FPWTKKLEANNKKVFGNHSFRPN
Sbjct: 395 EPYIPKLIEVNYIEGSSDKKWSSGNFPWTKKLEANNKKVFGNHSFRPN 442


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
           vinifera]
          Length = 1224

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/108 (57%), Positives = 76/108 (70%)
 Frame = -3

Query: 324 PVSSFMIDPLRFDSQVHIRNELGNYGDRSTSVPYCPTDRFSSPLSCSMDRPSFASTPLDR 145
           P ++  IDP+RFD+QVH+RNE GNY   +TS          S    S+DR      PL+R
Sbjct: 334 PATAVGIDPMRFDAQVHLRNEPGNYEKWNTS----------SVSFSSIDRFGVTPYPLER 383

Query: 144 EIFAPKLAEVNYIDGSTDQRWKSVDFPWTKKLEANNKKVFGNHSFRPN 1
           E + PKL EVNYI+GS+D++W S +FPWTKKLEANNKKVFGNHSFRPN
Sbjct: 384 EPYIPKLIEVNYIEGSSDKKWSSGNFPWTKKLEANNKKVFGNHSFRPN 431


>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/114 (53%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
 Frame = -3

Query: 339 FQSVTP-VSSFMIDPLRFDSQVHIRNELGNYGDRSTSVPYCPTDRFSSPLSCSMDRPSFA 163
           FQ  TP  ++  IDP+RFD+QV++RNE G Y   +T     P+  FSS     +DR   +
Sbjct: 360 FQYETPQCAANKIDPMRFDAQVYLRNESGGYESWNT-----PSISFSS-----VDRFGIS 409

Query: 162 STPLDREIFAPKLAEVNYIDGSTDQRWKSVDFPWTKKLEANNKKVFGNHSFRPN 1
           S P++RE + PK  EVNYI+GS D +W S +FPWT KLEA NKKVFGNHSFRPN
Sbjct: 410 SGPIEREPYIPKFVEVNYIEGSNDPKWSSTNFPWTTKLEAYNKKVFGNHSFRPN 463


>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/113 (53%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
 Frame = -3

Query: 336 QSVTPVSSFM-IDPLRFDSQVHIRNELGNYGDRSTSVPYCPTDRFSSPLSCSMDRPSFAS 160
           Q  TP S+   IDP+RFD+QVH+RN+L  Y   +      P+  FSS     +D    +S
Sbjct: 360 QYETPQSAACKIDPMRFDAQVHLRNDLNGYEKWNA-----PSVSFSS-----IDSFGVSS 409

Query: 159 TPLDREIFAPKLAEVNYIDGSTDQRWKSVDFPWTKKLEANNKKVFGNHSFRPN 1
            PL+RE + P   EVNYI+GS D +W S +FPWTKKLEANNKKVFGNHSFRPN
Sbjct: 410 VPLEREPYIPSFVEVNYIEGSNDPKWSSTNFPWTKKLEANNKKVFGNHSFRPN 462


>ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
          Length = 1160

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/98 (51%), Positives = 61/98 (62%)
 Frame = -3

Query: 294 RFDSQVHIRNELGNYGDRSTSVPYCPTDRFSSPLSCSMDRPSFASTPLDREIFAPKLAEV 115
           R+D+Q ++ NE   YG    S+P    D  + PL             + RE F PK+ EV
Sbjct: 330 RYDTQAYMGNE--TYGSSFQSLPSFSVDNCNMPLGS-----------VGREAFIPKIIEV 376

Query: 114 NYIDGSTDQRWKSVDFPWTKKLEANNKKVFGNHSFRPN 1
           NYI+GS D+RW S DFPWTK+LE NNKKVFGNHSFRPN
Sbjct: 377 NYIEGSGDKRWSSYDFPWTKELEVNNKKVFGNHSFRPN 414


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