BLASTX nr result

ID: Dioscorea21_contig00040028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040028
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01679079.1| conserved hypothetical protein [Vibrio choler...    49   8e-09
ref|ZP_08856823.1| hypothetical protein HMPREF9022_02480, partia...    39   2e-06
ref|ZP_08200493.1| hypothetical protein NBCG_05699 [Nocardioidac...    55   8e-06

>ref|ZP_01679079.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
           gi|121546188|gb|EAX56522.1| conserved hypothetical
           protein [Vibrio cholerae 2740-80]
          Length = 108

 Score = 48.5 bits (114), Expect(2) = 8e-09
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +3

Query: 48  VGDHPLRPPKDHRLGEPLPHQLANTT 125
           + DHPLRP +D RLGEPLPHQLAN T
Sbjct: 1   MADHPLRPARDRRLGEPLPHQLANPT 26



 Score = 36.2 bits (82), Expect(2) = 8e-09
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +1

Query: 187 LCGISYRFQ*LSPTTRQVTYALLTR 261
           LCGIS+RFQ LSP  R ++ ALLTR
Sbjct: 45  LCGISHRFQWLSPLYRAISQALLTR 69


>ref|ZP_08856823.1| hypothetical protein HMPREF9022_02480, partial [Erysipelotrichaceae
           bacterium 2_2_44A] gi|345905407|gb|EGX75147.1|
           hypothetical protein HMPREF9022_02480
           [Erysipelotrichaceae bacterium 2_2_44A]
          Length = 196

 Score = 38.5 bits (88), Expect(2) = 2e-06
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 57  HPLRPPKDHRLGEPLPHQLAN 119
           +PLRP   HRLG PLPHQLAN
Sbjct: 2   YPLRPATHHRLGGPLPHQLAN 22



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 21/36 (58%), Positives = 23/36 (63%)
 Frame = +1

Query: 157 FQVTIMQ*SILCGISYRFQ*LSPTTRQVTYALLTRS 264
           F +  M+   L G SYRFQ LS T  QVTY LLTRS
Sbjct: 36  FNILSMRSVYLSGFSYRFQQLSRTHGQVTYVLLTRS 71


>ref|ZP_08200493.1| hypothetical protein NBCG_05699 [Nocardioidaceae bacterium Broad-1]
           gi|325947935|gb|EGD40054.1| hypothetical protein
           NBCG_05699 [Nocardioidaceae bacterium Broad-1]
          Length = 86

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/73 (47%), Positives = 46/73 (63%)
 Frame = +1

Query: 46  VWGITLSGPLKIIALVSRYLTN*LIQRRSIW*WCSCTFQVTIMQ*SILCGISYRFQ*LSP 225
           +W +TLSG L + ALVS YLTN LI R  I      TF    MQ  ++ GI++RF+ LS 
Sbjct: 1   MWPVTLSGRLPVEALVSHYLTNKLIGREHI--PGRKTFHNHPMQEVVVSGINHRFRWLSQ 58

Query: 226 TTRQVTYALLTRS 264
           +  Q+T+ LLTRS
Sbjct: 59  SLGQITHVLLTRS 71


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