BLASTX nr result

ID: Dioscorea21_contig00040024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040024
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315129.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
emb|CBI25415.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002277929.1| PREDICTED: probable leucine-rich repeat rece...    61   8e-08
ref|XP_002323617.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003545217.1| PREDICTED: probably inactive leucine-rich re...    58   9e-07

>ref|XP_002315129.1| predicted protein [Populus trichocarpa] gi|222864169|gb|EEF01300.1|
           predicted protein [Populus trichocarpa]
          Length = 827

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/71 (52%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
 Frame = -3

Query: 262 NLSGQVPLPLSEKFNSSSFRGNIQLCGY--XXXXXXXXXXXXXXXXXXXPGKSQNRKLSA 89
           NLSG VP+PLS+KFNSSSF GNIQLCGY                       K  +RKLS 
Sbjct: 388 NLSGPVPIPLSQKFNSSSFVGNIQLCGYSGTAPCPSHAPSPSVPVPPPEKPKKHHRKLST 447

Query: 88  KDIILIVAGII 56
           KDIILI AG +
Sbjct: 448 KDIILIAAGAL 458


>emb|CBI25415.3| unnamed protein product [Vitis vinifera]
          Length = 1050

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/71 (50%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = -3

Query: 262 NLSGQVPLPLSEKFNSSSFRGNIQLCGYXXXXXXXXXXXXXXXXXXXPGK--SQNRKLSA 89
           NLSG VP  LS+KFNSS F GN+QLCGY                    GK  S  RKLS 
Sbjct: 661 NLSGSVPALLSQKFNSSCFVGNLQLCGYDASTPCPSEVPSQVVPAPSRGKPRSHGRKLST 720

Query: 88  KDIILIVAGII 56
           KDIILI AG +
Sbjct: 721 KDIILIAAGAL 731


>ref|XP_002277929.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase IMK3-like isoform 1 [Vitis vinifera]
          Length = 869

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/71 (50%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = -3

Query: 262 NLSGQVPLPLSEKFNSSSFRGNIQLCGYXXXXXXXXXXXXXXXXXXXPGK--SQNRKLSA 89
           NLSG VP  LS+KFNSS F GN+QLCGY                    GK  S  RKLS 
Sbjct: 432 NLSGSVPALLSQKFNSSCFVGNLQLCGYDASTPCPSEVPSQVVPAPSRGKPRSHGRKLST 491

Query: 88  KDIILIVAGII 56
           KDIILI AG +
Sbjct: 492 KDIILIAAGAL 502


>ref|XP_002323617.1| predicted protein [Populus trichocarpa] gi|222868247|gb|EEF05378.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = -3

Query: 262 NLSGQVPLPLSEKFNSSSFRGNIQLCGYXXXXXXXXXXXXXXXXXXXPG-KSQNRKLSAK 86
           NLSG VP  +++KFNSSSF GN+QLCGY                      K  +RKLS K
Sbjct: 387 NLSGSVPSSIAKKFNSSSFVGNLQLCGYSISTPCPSPPPEILPAPTKGSPKHHHRKLSTK 446

Query: 85  DIILIVAGII 56
           DIILI AGI+
Sbjct: 447 DIILIAAGIL 456


>ref|XP_003545217.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase IMK2-like [Glycine max]
          Length = 797

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = -3

Query: 262 NLSGQVPLPLSEKFNSSSFRGNIQLCGYXXXXXXXXXXXXXXXXXXXPGKSQNRKLSAKD 83
           NLSG VP  L++KFNSSSF GNIQLCGY                     +  ++KL  KD
Sbjct: 361 NLSGPVPTLLAQKFNSSSFVGNIQLCGYSPSTTCPSLAPSGSPPEISEHR-HHKKLGTKD 419

Query: 82  IILIVAGII 56
           IILIVAG++
Sbjct: 420 IILIVAGVL 428


Top