BLASTX nr result

ID: Dioscorea21_contig00040020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040020
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607257.1| TIMELESS-interacting protein [Medicago trunc...    74   1e-11
gb|ADE77331.1| unknown [Picea sitchensis]                              68   7e-10
ref|XP_002272919.1| PREDICTED: TIMELESS-interacting protein [Vit...    67   1e-09
gb|EAY87626.1| hypothetical protein OsI_09037 [Oryza sativa Indi...    64   1e-08
ref|NP_001048202.1| Os02g0762200 [Oryza sativa Japonica Group] g...    63   2e-08

>ref|XP_003607257.1| TIMELESS-interacting protein [Medicago truncatula]
           gi|355508312|gb|AES89454.1| TIMELESS-interacting protein
           [Medicago truncatula]
          Length = 286

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/90 (42%), Positives = 56/90 (62%)
 Frame = +1

Query: 4   EAHDVDDIQEEMFDEIYRKATQDPNQSDNSNEPEQPSKNTMHVDLNPVERSTEEIQNQVT 183
           E   V++IQE++F++IY KAT+         EP QP +N + V  +P   +TE+  N+V 
Sbjct: 195 EPETVNNIQEDLFNDIYDKATE---------EPSQPVQNVISVSTDPKSSTTEKTSNEVP 245

Query: 184 NSNAVQADKIQITEEQKVRMEANRLKAIER 273
           N+    +   +IT EQ+ RMEANRLKA+ER
Sbjct: 246 NNGTSLSSSAEITAEQRARMEANRLKALER 275


>gb|ADE77331.1| unknown [Picea sitchensis]
          Length = 297

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
 Frame = +1

Query: 19  DDIQEEMFDEIYRKAT-QDPNQSDNSNEPEQPSKNTMH----VDLNPVERSTEEIQNQVT 183
           DDIQE++FDE+YR+A  +DPN S           ++      ++  P E+  ++ QN+V 
Sbjct: 200 DDIQEDLFDELYRQAVGEDPNSSSQKGSENVVDSHSFSQAPILNNTPEEQGWQQSQNEV- 258

Query: 184 NSNAVQADKIQITEEQKVRMEANRLKAIERA 276
             N     + QITEEQK RMEANRLKA+ERA
Sbjct: 259 --NGQGKSENQITEEQKARMEANRLKALERA 287


>ref|XP_002272919.1| PREDICTED: TIMELESS-interacting protein [Vitis vinifera]
           gi|297738277|emb|CBI27478.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
 Frame = +1

Query: 19  DDIQEEMFDEIYRKATQDPNQSDNSN--EPEQPSKNTMHVDLNPVERSTEEIQNQVTNSN 192
           +D+QE+M  E+YR AT++P+Q+  S+    + PS+ +          S +E+ NQV  + 
Sbjct: 205 EDVQEDMLHEVYRSATEEPSQTLASDMVAGDVPSEGS----------SKKELPNQVPENG 254

Query: 193 AVQADKIQITEEQKVRMEANRLKAIERA 276
            +++D IQITEEQK RMEANR KA+ERA
Sbjct: 255 PIRSD-IQITEEQKARMEANRQKALERA 281


>gb|EAY87626.1| hypothetical protein OsI_09037 [Oryza sativa Indica Group]
          Length = 324

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = +1

Query: 1   MEAHDVDDIQEEMFDEIYRKATQDPNQSDNSNEPEQPSKNTMHVDLNPVERSTEEIQNQV 180
           +E++DVD +QE++ +EIY K   +P         E+ +      +  P +    E QNQ 
Sbjct: 230 VESNDVDPMQEDLLNEIYNKEADEPQIPAVGGRAEETTPAMASKEAKPQDDPPREAQNQ- 288

Query: 181 TNSNAVQADKIQITEEQKVRMEANRLKAIERA 276
                    KIQ+TEEQ+ RMEANRL+A+ERA
Sbjct: 289 -------PGKIQLTEEQRARMEANRLRALERA 313


>ref|NP_001048202.1| Os02g0762200 [Oryza sativa Japonica Group]
           gi|46805898|dbj|BAD17211.1| CCHC-type zinc finger
           protein-like [Oryza sativa Japonica Group]
           gi|113537733|dbj|BAF10116.1| Os02g0762200 [Oryza sativa
           Japonica Group] gi|215737375|dbj|BAG96304.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 324

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = +1

Query: 1   MEAHDVDDIQEEMFDEIYRKATQDPNQSDNSNEPEQPSKNTMHVDLNPVERSTEEIQNQV 180
           +E++DVD +QE++ +EIY K   +P         E+ +      +  P +    E QNQ 
Sbjct: 230 VESNDVDPMQEDLLNEIYNKEADEPQIPAVGGTAEETTPAMAPKEAKPQDDPPREAQNQ- 288

Query: 181 TNSNAVQADKIQITEEQKVRMEANRLKAIERA 276
                    KIQ+TEEQ+ RMEANRL+A+ERA
Sbjct: 289 -------PGKIQLTEEQRARMEANRLRALERA 313


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