BLASTX nr result

ID: Dioscorea21_contig00040016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040016
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533888.1| PREDICTED: two-component response regulator ...   114   6e-24
ref|XP_003546612.1| PREDICTED: two-component response regulator ...   111   5e-23
ref|XP_003526216.1| PREDICTED: two-component response regulator ...   110   9e-23
ref|XP_003522444.1| PREDICTED: two-component response regulator ...   110   9e-23
gb|AFW85563.1| putative two-component response regulator family ...   108   3e-22

>ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
           max]
          Length = 676

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/149 (42%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
 Frame = +3

Query: 3   VIMLSIHGDTKSVTKCIEHGACDYMVKPARFEELKLIWKHVVKRSMTETTFEHXXXXXXX 182
           VIMLS HGDTK V K + HGACDY++KP R EELK IW+HVV+R   ++  ++       
Sbjct: 94  VIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHVVRRKNFDSRDQNKASNEEK 153

Query: 183 XXXXXDGSSQA------------SGNDHPDQGKGKENELPTSVSDEGSSLVKKARVTWSS 326
                 G SQ              G    DQ   +E     +  DE  S  KKARV WS 
Sbjct: 154 APNFAGGGSQGLRSENSADQNKRLGKKRKDQSDEEEEGGEENEDDEDPSAQKKARVVWSV 213

Query: 327 DLHAVFVRAVNTVGIDRAGPKRILEMMGV 413
           +LH  FV AVN +G+D+A PK+IL++M V
Sbjct: 214 ELHRKFVAAVNQLGLDKAVPKKILDLMNV 242


>ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
           max]
          Length = 697

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
 Frame = +3

Query: 3   VIMLSIHGDTKSVTKCIEHGACDYMVKPARFEELKLIWKHVVKRSMTETTFEHXXXXXXX 182
           VIMLS HGDTK V K + HGACDY++KP R EELK IW+HVV+R   ++  ++       
Sbjct: 94  VIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHVVRRKNFDSRDQNKASNEEK 153

Query: 183 XXXXXDGSSQA------------SGNDHPDQGKGKENELPTSVSDEGSSLVKKARVTWSS 326
                   SQ              G    DQ + +E +   +  DE  S  KK RV WS 
Sbjct: 154 APNIAGEGSQGLRSENSADQNKRLGKKRKDQSEEEEEDGEENGDDEDPSAQKKPRVVWSV 213

Query: 327 DLHAVFVRAVNTVGIDRAGPKRILEMMGV 413
           +LH  FV AVN +G+D+A PK+IL++M V
Sbjct: 214 ELHRKFVAAVNQLGLDKAVPKKILDLMNV 242


>ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
           max]
          Length = 696

 Score =  110 bits (276), Expect = 9e-23
 Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 11/148 (7%)
 Frame = +3

Query: 3   VIMLSIHGDTKSVTKCIEHGACDYMVKPARFEELKLIWKHVVKRSMTETTFEHXXXXXXX 182
           VIMLS +GDTK V K I HGACDY++KP R EELK IW+HV++R   ++  ++       
Sbjct: 93  VIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKNIWQHVIRRKKFDSKEKNKTRNIDK 152

Query: 183 XXXXXD---GSSQASGNDH--------PDQGKGKENELPTSVSDEGSSLVKKARVTWSSD 329
                    GSS    +DH         DQ + ++ E      ++  S  KK RV WS +
Sbjct: 153 PTSNSSNGLGSSGTGNSDHNEKLTKKRKDQDEDEDEEQENDHDNDDPSAQKKPRVVWSVE 212

Query: 330 LHAVFVRAVNTVGIDRAGPKRILEMMGV 413
           LH  FV AVN +GID+A PK+IL++M V
Sbjct: 213 LHRKFVAAVNQLGIDKAVPKKILDLMNV 240


>ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
           max]
          Length = 656

 Score =  110 bits (276), Expect = 9e-23
 Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 11/148 (7%)
 Frame = +3

Query: 3   VIMLSIHGDTKSVTKCIEHGACDYMVKPARFEELKLIWKHVVKRSMTETTFEHXXXXXXX 182
           VIMLS +GDTK V K I HGACDY++KP R EELK IW+HV++R   ++  ++       
Sbjct: 93  VIMLSANGDTKMVMKGISHGACDYLLKPVRMEELKNIWQHVIRRKKFDSKEKNKTSNLDK 152

Query: 183 XXXXXD---GSSQASGND--------HPDQGKGKENELPTSVSDEGSSLVKKARVTWSSD 329
                    GSS    +D          DQ + ++ +    + +E  S  KK RV WS D
Sbjct: 153 PTSNSGNGLGSSGTGNSDQNEKLTKKRKDQDEDEDEDQENDLDNEDPSAQKKPRVVWSVD 212

Query: 330 LHAVFVRAVNTVGIDRAGPKRILEMMGV 413
           LH  FV AVN +GID+A PK+IL++M V
Sbjct: 213 LHRKFVAAVNQLGIDKAVPKKILDLMNV 240


>gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
          Length = 669

 Score =  108 bits (271), Expect = 3e-22
 Identities = 63/157 (40%), Positives = 83/157 (52%), Gaps = 20/157 (12%)
 Frame = +3

Query: 3   VIMLSIHGDTKSVTKCIEHGACDYMVKPARFEELKLIWKHVVKRSMTETTFEHXXXXXXX 182
           VIMLS++G+TKSV K I HGACDY++KP R EEL+ IW+HVV+R  ++    +       
Sbjct: 103 VIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQHVVRRKFSKRERSNLDVYKDF 162

Query: 183 XXXXXDGSSQASGNDHPDQGKG----------KENELPTSVSDEGS----------SLVK 302
                     + G+ H     G          K  E+ +   D+G           S  K
Sbjct: 163 NRLPGADPCHSHGHGHGQTTAGASDQSGRIGRKRKEMHSDEEDDGEENDFQEGDEPSAAK 222

Query: 303 KARVTWSSDLHAVFVRAVNTVGIDRAGPKRILEMMGV 413
           K RV WS +LH  FV AVN +GID+A PKRILE+M V
Sbjct: 223 KPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNV 259


Top