BLASTX nr result

ID: Dioscorea21_contig00040006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00040006
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39865.3| unnamed protein product [Vitis vinifera]              154   6e-36
emb|CAN72657.1| hypothetical protein VITISV_039673 [Vitis vinifera]   153   1e-35
gb|ABY89953.1| WRKY transcription factor PmWRKY109 [Pinus montic...   140   1e-31
gb|ABY89952.1| WRKY transcription factor PmWRKY108 [Pinus montic...   139   2e-31
gb|ACH63233.1| WRKY protein [Rheum australe]                          139   3e-31

>emb|CBI39865.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  154 bits (390), Expect = 6e-36
 Identities = 91/187 (48%), Positives = 108/187 (57%), Gaps = 17/187 (9%)
 Frame = +3

Query: 3   WWKYGEKQVKGCDYPRTYYRCAHLNCPMKKKVEQSHEHRITKIIYKGAHNHIKPP----- 167
           W KYG+KQVKG ++PR+YY+C H NC +KKKVE+SHE  IT+IIYKGAHNH KPP     
Sbjct: 270 WRKYGQKQVKGSEFPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHNHSKPPPNRRS 329

Query: 168 -LSYWVPAPDYLENMASQIDLDG-------NLLTTTSQDTNQCATSEFGDLSVSSDDEID 323
            +    P  D   ++  Q    G       N     S D    A+S F +     DD + 
Sbjct: 330 AIGSSNPLSDMQLDIPEQAGPHGGDGDPGQNGAPFESSDAVD-ASSTFSN-DEDDDDRVT 387

Query: 324 WGAC----DGERAEAESKRRKXXXXXXXXXXXXXXXHEPRVVVQTTSEIDILDDGYRWRK 491
            G+     DGE  E+ESKRRK                EPRVVVQTTSE+DILDDGYRWRK
Sbjct: 388 HGSVSLGYDGEGDESESKRRKVEAYATEMSGATRAIREPRVVVQTTSEVDILDDGYRWRK 447

Query: 492 YGQKVVK 512
           YGQKVVK
Sbjct: 448 YGQKVVK 454



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 3   WWKYGEKQVKGCDYPRTYYRCAHLNCPMKKKVEQ-SHEHRITKIIYKGAHNHIKP 164
           W KYG+K VKG   PR+YY+C +  C ++K VE+ SH+ +     Y+G HNH  P
Sbjct: 445 WRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVP 499


>emb|CAN72657.1| hypothetical protein VITISV_039673 [Vitis vinifera]
          Length = 717

 Score =  153 bits (387), Expect = 1e-35
 Identities = 90/197 (45%), Positives = 117/197 (59%), Gaps = 27/197 (13%)
 Frame = +3

Query: 3   WWKYGEKQVKGCDYPRTYYRCAHLNCPMKKKVEQSHEHRITKIIYKGAHNHIKPPLSYW- 179
           W KYG+KQVKG ++PR+YY+C H NC +KKKVE+SHE  IT+IIYKGAHNH KPP +   
Sbjct: 323 WRKYGQKQVKGSEFPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHNHSKPPPNRRS 382

Query: 180 -VPAPDYLENMASQIDL---------DGNLLTTTSQDTNQCATSEFG----DLSVSS--- 308
            + + + L +M  Q+D+         DG+ +  ++Q        ++     ++  SS   
Sbjct: 383 AIGSSNPLSDM--QLDIPEQAGPHGGDGDPVWASTQKGTAAGAPDWRHDNLEVDASSTFS 440

Query: 309 -----DDEIDWGAC----DGERAEAESKRRKXXXXXXXXXXXXXXXHEPRVVVQTTSEID 461
                DD +  G+     DGE  E+ESKRRK                EPRVVVQTTSE+D
Sbjct: 441 NDEDDDDRVTHGSVSLGYDGEGDESESKRRKVEAYATEMSGATRAIREPRVVVQTTSEVD 500

Query: 462 ILDDGYRWRKYGQKVVK 512
           ILDDGYRWRKYGQKVVK
Sbjct: 501 ILDDGYRWRKYGQKVVK 517



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 3   WWKYGEKQVKGCDYPRTYYRCAHLNCPMKKKVEQ-SHEHRITKIIYKGAHNHIKP 164
           W KYG+K VKG   PR+YY+C +  C ++K VE+ SH+ +     Y+G HNH  P
Sbjct: 508 WRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVP 562


>gb|ABY89953.1| WRKY transcription factor PmWRKY109 [Pinus monticola]
          Length = 234

 Score =  140 bits (352), Expect = 1e-31
 Identities = 82/193 (42%), Positives = 108/193 (55%), Gaps = 23/193 (11%)
 Frame = +3

Query: 3   WWKYGEKQVKGCDYPRTYYRCAHLNCPMKKKVEQSHEHRITKIIYKGAHNHIKPPLSYWV 182
           W KYG+K VKG +YPR+YY+C H +CP KKK+E+S +  +T+I+YKG HNH KP  S  +
Sbjct: 1   WRKYGQKHVKGSEYPRSYYKCTHPSCPTKKKIERSLDGHVTEIVYKGVHNHNKPQPSRRM 60

Query: 183 PAP-------------DYLENMASQIDL-DGNLLTTTSQDTNQC---ATSEFGDLSVSSD 311
            A              +  E   + + + D +      Q++N      T E   +S S D
Sbjct: 61  GAAAAAAAAAARHEEGESTEGCGALVKVEDPSSTPPRRQNSNHLESQGTPEQSSISASED 120

Query: 312 D----EID--WGACDGERAEAESKRRKXXXXXXXXXXXXXXXHEPRVVVQTTSEIDILDD 473
           D    ++D   G  D +  E++SKRRK                EPRVVVQTTS+IDILDD
Sbjct: 121 DDGRTQVDKFSGDEDPDEEESDSKRRKKEANAMDIIGATRTIREPRVVVQTTSDIDILDD 180

Query: 474 GYRWRKYGQKVVK 512
           GYRWRKYGQKVVK
Sbjct: 181 GYRWRKYGQKVVK 193


>gb|ABY89952.1| WRKY transcription factor PmWRKY108 [Pinus monticola]
          Length = 234

 Score =  139 bits (351), Expect = 2e-31
 Identities = 82/193 (42%), Positives = 108/193 (55%), Gaps = 23/193 (11%)
 Frame = +3

Query: 3   WWKYGEKQVKGCDYPRTYYRCAHLNCPMKKKVEQSHEHRITKIIYKGAHNHIKPPLSYWV 182
           W KYG+K VKG +YPR+YY+C H +CP KKK+E+S +  +T+I+YKG HNH KP  S  +
Sbjct: 1   WRKYGQKHVKGSEYPRSYYKCTHPSCPTKKKIERSLDGHVTEIVYKGLHNHNKPQPSRRM 60

Query: 183 PAP-------------DYLENMASQIDL-DGNLLTTTSQDTNQC---ATSEFGDLSVSSD 311
            A              +  E   + + + D +      Q++N      T E   +S S D
Sbjct: 61  GAAAAAAAAAARHEEGESTEGCGALVKVEDPSSTPPRRQNSNHLESQGTPEQSSISASED 120

Query: 312 D----EID--WGACDGERAEAESKRRKXXXXXXXXXXXXXXXHEPRVVVQTTSEIDILDD 473
           D    ++D   G  D +  E++SKRRK                EPRVVVQTTS+IDILDD
Sbjct: 121 DDGRTQVDKFSGDEDPDEEESDSKRRKKEANAMDIIGATRTIREPRVVVQTTSDIDILDD 180

Query: 474 GYRWRKYGQKVVK 512
           GYRWRKYGQKVVK
Sbjct: 181 GYRWRKYGQKVVK 193


>gb|ACH63233.1| WRKY protein [Rheum australe]
          Length = 498

 Score =  139 bits (349), Expect = 3e-31
 Identities = 82/176 (46%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3   WWKYGEKQVKGCDYPRTYYRCAHLNCPMKKKVEQSHEHRITKIIYKGAHNHIKPPLSYWV 182
           W KYG+KQVKG + PR+YY+C++ NCP KKKVE S E  +T+I+YKG+HNH KP      
Sbjct: 235 WRKYGQKQVKGSENPRSYYKCSYPNCPTKKKVEMSVEGHVTEIVYKGSHNHPKPQ----- 289

Query: 183 PAPDYLENMASQIDLDGNLLTTTSQDTNQCATSEFGDLSVSSDDEIDWGAC-----DGER 347
                    +S   LD   L   S D +   T E   +S+  DDE D  +        + 
Sbjct: 290 ------PKRSSYDGLDAP-LPAHSMDPSPNLTPETSSVSMEEDDEFDHTSALSMTRPAKE 342

Query: 348 AEAESKRRK-XXXXXXXXXXXXXXXHEPRVVVQTTSEIDILDDGYRWRKYGQKVVK 512
            E +SKR K                 EPRVVVQTTSEIDILDDGYRWRKYGQKVVK
Sbjct: 343 DEPDSKRWKGESETEAMSAYGSRAVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVK 398



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
 Frame = +3

Query: 3   WWKYGEKQVKGCDYPRTYYRCAHLNCPMKKKVEQ-SHEHRITKIIYKGAHNHIKPPL--- 170
           W KYG+K VKG   PR+YY+C  + CP++K +E+ S++ R     Y+G HNH  P     
Sbjct: 389 WRKYGQKVVKGNPNPRSYYKCTSIGCPVRKHIERASNDMRAVITTYEGKHNHDIPAARGS 448

Query: 171 SYWVPAPD 194
           SY +  P+
Sbjct: 449 SYSINRPE 456


Top