BLASTX nr result

ID: Dioscorea21_contig00039999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039999
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...    64   1e-08
ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 ...    64   2e-08
ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein A...    60   1e-07
gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indi...    60   2e-07
gb|ABA98003.1| retrotransposon protein, putative, unclassified [...    59   3e-07

>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
           gi|241946107|gb|EES19252.1| hypothetical protein
           SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/82 (35%), Positives = 48/82 (58%)
 Frame = -3

Query: 269 SFPFKYLGVLISPKRIAAQSFQCMINKIKSLTSRWTSFNLSPIAKEVLINSTLLSIPIYT 90
           +FP KYLGV +SP R+    +  +I+K       W   N+S   +  LI+S+L + PIY 
Sbjct: 366 TFPIKYLGVPVSPSRLHVSDWSPLIDKSMKKLDIWKGGNMSIAGRSTLISSSLNNAPIYH 425

Query: 89  LSVYPIHESILSEISKVARKFF 24
           +S+Y + +S++  + K+ R FF
Sbjct: 426 MSIYLLPKSVIGRLDKIRRNFF 447


>ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 [Sorghum bicolor]
            gi|241947177|gb|EES20322.1| hypothetical protein
            SORBIDRAFT_0015s007030 [Sorghum bicolor]
          Length = 933

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/82 (37%), Positives = 50/82 (60%)
 Frame = -3

Query: 269  SFPFKYLGVLISPKRIAAQSFQCMINKIKSLTSRWTSFNLSPIAKEVLINSTLLSIPIYT 90
            SFPFKYLGV +SP RI  + +  ++ K       W   +LS   ++ LI+STL + P+Y 
Sbjct: 756  SFPFKYLGVPVSPSRIHVRDWLPIVEKAYRKLDVWKGNSLSIPGRKTLIDSTLSNAPLYQ 815

Query: 89   LSVYPIHESILSEISKVARKFF 24
            +S+Y + ++I  ++ K+ R FF
Sbjct: 816  ISIYLLPKTITYKLDKIRRTFF 837


>ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 549

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = -3

Query: 269 SFPFKYLGVLISPKRIAAQSFQCMINKIKSLTSRWTSFNLSPIAKEVLINSTLLSIPIYT 90
           SFPF YLG+ I       Q ++ +INK +   + W   +LS   + +LINS L SIPIY 
Sbjct: 152 SFPFTYLGIPIGANPRRCQMWEPLINKCERKLAGWKQRHLSFGGRVILINSVLTSIPIYF 211

Query: 89  LSVYPIHESILSEISKVARKF 27
           LS + +   ++S+I+++ R F
Sbjct: 212 LSFFRVPRQVISKITRLQRNF 232


>gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indica Group]
          Length = 961

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/86 (38%), Positives = 48/86 (55%)
 Frame = -3

Query: 281 LNQASFPFKYLGVLISPKRIAAQSFQCMINKIKSLTSRWTSFNLSPIAKEVLINSTLLSI 102
           + QASF  KYLG+     R+ A  FQ +  + +   S W   NLS   KEVLI S L ++
Sbjct: 481 VQQASFDDKYLGLPTPLGRMKAGRFQALKERFEKRLSEWCEKNLSMGGKEVLIKSVLQAL 540

Query: 101 PIYTLSVYPIHESILSEISKVARKFF 24
           P Y +SV+ +  S+  E  ++ RKF+
Sbjct: 541 PTYVMSVFRLPASLCEEYMQLIRKFW 566


>gb|ABA98003.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 583

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/83 (38%), Positives = 47/83 (56%)
 Frame = -3

Query: 275 QASFPFKYLGVLISPKRIAAQSFQCMINKIKSLTSRWTSFNLSPIAKEVLINSTLLSIPI 96
           +ASFP  YLG+ ++P R+    FQ + +KIK   S W    L    + +++NS L +IP 
Sbjct: 294 RASFPLTYLGLPLTPGRLRKVHFQPLQDKIKGRFSGWKPSLLYMGGRRIMVNSVLSAIPT 353

Query: 95  YTLSVYPIHESILSEISKVARKF 27
           YTL+V    +  L EI K  R+F
Sbjct: 354 YTLTVLKPPKQSLQEIDKARRRF 376


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