BLASTX nr result

ID: Dioscorea21_contig00039984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039984
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326948.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|NP_001047428.1| Os02g0614700 [Oryza sativa Japonica Group] g...    77   1e-12
ref|XP_002510180.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
gb|AFW72329.1| hypothetical protein ZEAMMB73_788348 [Zea mays]         75   4e-12
ref|XP_002454173.1| hypothetical protein SORBIDRAFT_04g025990 [S...    75   7e-12

>ref|XP_002326948.1| predicted protein [Populus trichocarpa] gi|222835263|gb|EEE73698.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
 Frame = -3

Query: 299 GLCVVCDGDKQHRNSSEISWEIPPGSSEFMQTVNINSAKDDELASS---SSCSIVKMSLP 129
           GLC    GD      +EISWE+  GS++FMQ + +NS       S+   S+ S+++ +LP
Sbjct: 126 GLCAA--GDPGRETDTEISWEVCQGSADFMQKIRLNSGLKKVNVSNPSLSAASVIRTALP 183

Query: 128 LPGPSLATASFPQEAYFEISIIHLGGISQ 42
           LPGP L  +SFPQEAYFEI++++  G  Q
Sbjct: 184 LPGPPLGNSSFPQEAYFEITVLYSHGDDQ 212


>ref|NP_001047428.1| Os02g0614700 [Oryza sativa Japonica Group]
           gi|113536959|dbj|BAF09342.1| Os02g0614700 [Oryza sativa
           Japonica Group]
          Length = 513

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 27/109 (24%)
 Frame = -3

Query: 302 WGLCVVCDGDKQHRNSSEISWEIPPGSSEFMQTVNIN----------------------- 192
           WGLC  CD     R+ ++ +WE+P GSSE MQ V +N                       
Sbjct: 146 WGLCPACDSGTS-RDMADTAWEVPAGSSERMQAVRLNPVVAAAAAAVSASTKKWLPGSIP 204

Query: 191 ----SAKDDELASSSSCSIVKMSLPLPGPSLATASFPQEAYFEISIIHL 57
                   D   +SS+  + +MSLPLPGP LA A FPQ+AYFEI+II+L
Sbjct: 205 SPLRGGDHDAAGNSSALCLARMSLPLPGPPLAGAPFPQDAYFEITIIYL 253


>ref|XP_002510180.1| conserved hypothetical protein [Ricinus communis]
           gi|223550881|gb|EEF52367.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 480

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
 Frame = -3

Query: 299 GLCVVCDGDKQHRNSSEISWEIPPGSSEFMQTVNINSAKDDELASSS----SCSIVKMSL 132
           GLC V  GD      +EISWE+  GS++FMQ + +NS      A++S    + S+++  L
Sbjct: 128 GLCAV--GDYGREAETEISWEVCQGSADFMQKIRLNSGLKKINATNSPPMSAASVIRTGL 185

Query: 131 PLPGPSLATASFPQEAYFEISIIHLGG 51
           PLPGP L  ++FPQEAYFEI++++  G
Sbjct: 186 PLPGPPLGNSAFPQEAYFEITVLYCQG 212


>gb|AFW72329.1| hypothetical protein ZEAMMB73_788348 [Zea mays]
          Length = 499

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 19/101 (18%)
 Frame = -3

Query: 302 WGLCVVCDGDKQHRNSSEISWEIPPGSSEFMQTVNINSAK-------------------D 180
           WG C +CD       +   +WE+P GSSE MQ V ++ A                    D
Sbjct: 143 WGTCPLCDAGTSRDMAEAAAWELPMGSSERMQAVRLDPAAAAASSRKWLPGSNPSPLRGD 202

Query: 179 DELASSSSCSIVKMSLPLPGPSLATASFPQEAYFEISIIHL 57
            +  + ++  + +MSLPLPGP LA A FPQ+AYFEI+II+L
Sbjct: 203 TDAGNPNALCLARMSLPLPGPPLAGAPFPQDAYFEITIIYL 243


>ref|XP_002454173.1| hypothetical protein SORBIDRAFT_04g025990 [Sorghum bicolor]
           gi|241934004|gb|EES07149.1| hypothetical protein
           SORBIDRAFT_04g025990 [Sorghum bicolor]
          Length = 501

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 23/105 (21%)
 Frame = -3

Query: 302 WGLCVVCDGDKQHRNSSEISWEIPPGSSEFMQTVNINSAK-------------------- 183
           WG C +CD       +   +WE+P GSSE MQ V +N A                     
Sbjct: 139 WGTCPLCDAGTSRDMAEAAAWELPAGSSERMQAVRLNPAAAAAASGRKWLPGSIPSPLRG 198

Query: 182 DDELASS---SSCSIVKMSLPLPGPSLATASFPQEAYFEISIIHL 57
           D + A +   S+  I +MSLPLPGP LA A FPQ+AYFEI+II+L
Sbjct: 199 DTDGAGAGNPSALCIARMSLPLPGPPLAGAPFPQDAYFEITIIYL 243


Top