BLASTX nr result

ID: Dioscorea21_contig00039974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039974
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517246.1| chromatin assembly factor I P60 subunit, put...   112   4e-23
ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subun...   109   2e-22
dbj|BAK03917.1| predicted protein [Hordeum vulgare subsp. vulgare]    107   1e-21
ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arab...   106   2e-21
ref|NP_974991.1| transducin/WD40 domain-containing protein [Arab...   105   4e-21

>ref|XP_002517246.1| chromatin assembly factor I P60 subunit, putative [Ricinus
           communis] gi|223543617|gb|EEF45146.1| chromatin assembly
           factor I P60 subunit, putative [Ricinus communis]
          Length = 455

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = +2

Query: 68  MKGGTVQINWHDTQPVLSLDFHPHSGLLATAGNDHDIKLWEITWGESEKKLPTASYQKSL 247
           MKGGTVQINWH T+PVL+LDFHP SGLLAT G D DIK+W I  G++EKK+PTAS+Q SL
Sbjct: 1   MKGGTVQINWHGTKPVLTLDFHPISGLLATGGADFDIKMWLINSGDAEKKIPTASFQNSL 60

Query: 248 SYHSSAVN 271
           SYHSSAVN
Sbjct: 61  SYHSSAVN 68


>ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subunit B [Vitis vinifera]
           gi|296088566|emb|CBI37557.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/69 (72%), Positives = 58/69 (84%)
 Frame = +2

Query: 68  MKGGTVQINWHDTQPVLSLDFHPHSGLLATAGNDHDIKLWEITWGESEKKLPTASYQKSL 247
           M+GGTVQINWHDT+P+L+LDFHP SG LAT G D+DIKLW I  GE +K++PT SYQ SL
Sbjct: 1   MRGGTVQINWHDTKPILTLDFHPLSGTLATGGADYDIKLWLINSGEVQKEVPTVSYQTSL 60

Query: 248 SYHSSAVNI 274
           SYH SAVNI
Sbjct: 61  SYHGSAVNI 69


>dbj|BAK03917.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = +2

Query: 68  MKGGTVQINWHDTQPVLSLDFHPHSGLLATAGNDHDIKLWEITWGESEKKLPTASYQKSL 247
           M+GGTVQINWHD QPVL+LDFHP S  LAT G DHDIK+W +   ESE+KLPTASY  SL
Sbjct: 1   MRGGTVQINWHDLQPVLTLDFHPVSRRLATGGGDHDIKIWVVASDESEEKLPTASYVSSL 60

Query: 248 SYHSSAVNI 274
           S HSSAVN+
Sbjct: 61  SSHSSAVNV 69


>ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp.
           lyrata] gi|297310746|gb|EFH41170.1| hypothetical protein
           ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/68 (70%), Positives = 58/68 (85%)
 Frame = +2

Query: 68  MKGGTVQINWHDTQPVLSLDFHPHSGLLATAGNDHDIKLWEITWGESEKKLPTASYQKSL 247
           MKGGT+QI+WHD +PVL+LDFHP SGLLATAG D+DIKLW I  G++EKK+P+ SYQ SL
Sbjct: 1   MKGGTIQISWHDGKPVLTLDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSL 60

Query: 248 SYHSSAVN 271
           +YH  AVN
Sbjct: 61  TYHGCAVN 68


>ref|NP_974991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|75337830|sp|Q9SXY1.1|FAS2_ARATH RecName:
           Full=Chromatin assembly factor 1 subunit FAS2;
           Short=CAF-1 subunit FAS2; AltName: Full=CAF-1 p60
           homolog; AltName: Full=Protein FASCIATA 2
           gi|4884488|dbj|BAA77766.1| FAS2 [Arabidopsis thaliana]
           gi|10178066|dbj|BAB11430.1| FAS2 [Arabidopsis thaliana]
           gi|332010547|gb|AED97930.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 487

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/68 (69%), Positives = 58/68 (85%)
 Frame = +2

Query: 68  MKGGTVQINWHDTQPVLSLDFHPHSGLLATAGNDHDIKLWEITWGESEKKLPTASYQKSL 247
           MKGGT+QI+WHD +PVL++DFHP SGLLATAG D+DIKLW I  G++EKK+P+ SYQ SL
Sbjct: 1   MKGGTIQISWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSL 60

Query: 248 SYHSSAVN 271
           +YH  AVN
Sbjct: 61  TYHGCAVN 68


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