BLASTX nr result
ID: Dioscorea21_contig00039936
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00039936
(318 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527042.1| pentatricopeptide repeat-containing protein,... 130 1e-28
ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containi... 125 3e-27
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi... 122 2e-26
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi... 122 2e-26
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera] 122 2e-26
>ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533604|gb|EEF35342.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 520
Score = 130 bits (326), Expect = 1e-28
Identities = 62/98 (63%), Positives = 83/98 (84%)
Frame = -2
Query: 314 NVRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEA 135
+V+ DAVTF+S LSAC+QL+ALE+GKEIH I +DLE+NEI+M ALLDMYAKCG V+EA
Sbjct: 328 SVKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEA 387
Query: 134 QMVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDM 21
VF+KL +D++SWTS++ A+GSHGQA +AL LF+++
Sbjct: 388 LSVFNKLPERDLLSWTSIISAYGSHGQALEALRLFEEL 425
Score = 69.7 bits (169), Expect = 2e-10
Identities = 31/97 (31%), Positives = 62/97 (63%)
Frame = -2
Query: 302 DAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQMVF 123
++VT T+ +S+C +L LE+GKEIH+++ + + + + +AL+DMY K G ++ A+ +F
Sbjct: 130 NSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFGCLDLAKDIF 189
Query: 122 DKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLKE 12
+++ K +V+W S++ + S + + + LF M E
Sbjct: 190 EQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNME 226
Score = 56.6 bits (135), Expect = 2e-06
Identities = 26/97 (26%), Positives = 52/97 (53%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
++ D+ T+ S L AC L + G+ IH + + ++ ++L+ ++AKC A
Sbjct: 26 LQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSGFVFDIVVASSLVSLHAKCNLFGYAI 85
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDM 21
+FD++ +D+ W +++ + G+A KAL +F M
Sbjct: 86 QLFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKM 122
Score = 55.8 bits (133), Expect = 4e-06
Identities = 26/91 (28%), Positives = 53/91 (58%)
Frame = -2
Query: 293 TFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQMVFDKL 114
T +S L AC++ + L+ G+ IH + ++ + + + L+++Y KCG V+ A+ +F L
Sbjct: 234 TLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYML 293
Query: 113 QVKDIVSWTSMVVAHGSHGQASKALNLFQDM 21
++V W M+ + + G KAL+++ +M
Sbjct: 294 PKANVVLWNVMISGYVTIGDYVKALDMYDEM 324
>ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 125 bits (315), Expect = 3e-27
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2
Query: 317 NNVRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEE 138
++V+ DA+TF+S LSAC+QL+AL++G+E+H I LE+NEI+M ALLDMYAKCG V+E
Sbjct: 403 HHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDE 462
Query: 137 AQMVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLK 15
A+ +F +L +D+VSWTSM+ A+GSHGQAS+AL LF +M K
Sbjct: 463 ARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQK 503
Score = 76.3 bits (186), Expect = 3e-12
Identities = 34/97 (35%), Positives = 62/97 (63%)
Frame = -2
Query: 302 DAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQMVF 123
++VTFT +S+CT+L LE+GKE+H+++ + + +++AL+DMY KCG +E A+ VF
Sbjct: 206 NSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVF 265
Query: 122 DKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLKE 12
+K+ K+ ++W +M+ + G + + L M E
Sbjct: 266 EKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDE 302
Score = 57.0 bits (136), Expect = 2e-06
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = -2
Query: 302 DAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQMVF 123
D VT SAL CT L+QGK IHQ+I + +SN +L +L+ Y C A++VF
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 122 DKLQVK-DIVSWTSMVVAHGSHGQASKALNLFQDM 21
D+ W +++ A+ ++ + +AL LF +
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQL 96
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Frame = -2
Query: 296 VTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQMVFDK 117
+T TS + A ++ L GK IH I + ++ + + +L+D Y KCG V A+ +F
Sbjct: 309 MTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRT 368
Query: 116 LQVKDIVSWTSMVVAHGSHGQASKALNLFQDM 21
+ ++VSW M+ H G +AL+++ +M
Sbjct: 369 ISKNEVVSWNVMISGHVMVGNHIQALHIYDNM 400
Score = 56.2 bits (134), Expect = 3e-06
Identities = 31/100 (31%), Positives = 52/100 (52%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
VR D T+ L AC L + G+ IH + L + + ++L++MYAKC +A
Sbjct: 102 VRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAI 161
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLKE 12
+FD+ +D+ W +++ + G+A AL F D +KE
Sbjct: 162 KLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTF-DKMKE 200
>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 122 bits (307), Expect = 2e-26
Identities = 60/99 (60%), Positives = 77/99 (77%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
V +DA+TFTS L+AC+QL+ALE+GKEIH I L++NE++M ALLDMYAKCG V+EA
Sbjct: 405 VESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAF 464
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLK 15
VF L +D+VSWTSM+ A+GSHG A AL LF +ML+
Sbjct: 465 SVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQ 503
Score = 75.1 bits (183), Expect = 6e-12
Identities = 34/97 (35%), Positives = 59/97 (60%)
Frame = -2
Query: 302 DAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQMVF 123
++VT T+A+S+C +L L +G EIH+++ + + +AL+DMY KCG +E A +F
Sbjct: 206 NSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIF 265
Query: 122 DKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLKE 12
+++ K +V+W SM+ +G G + LF+ M E
Sbjct: 266 EQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNE 302
Score = 62.0 bits (149), Expect = 5e-08
Identities = 29/99 (29%), Positives = 56/99 (56%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
V+ T +S + C++ + L +GK +H + ++ + + ++L+D+Y KCG VE A+
Sbjct: 304 VKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAE 363
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLK 15
+F + +VSW M+ + + G+ +AL LF +M K
Sbjct: 364 KIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRK 402
>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 122 bits (307), Expect = 2e-26
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
V+ DA+TFTS L AC+QL+ LE+GKEIH I LE NE++M ALLDMYAKCG V+EA
Sbjct: 405 VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL 464
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDM 21
+F++L +D VSWTSM+ A+GSHGQA +AL LF+ M
Sbjct: 465 HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 501
Score = 84.3 bits (207), Expect = 9e-15
Identities = 38/99 (38%), Positives = 64/99 (64%)
Frame = -2
Query: 308 RADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQM 129
+ D+VT T+ +S+C +L LE+GKEIH ++ + + +AL+DMY KCG +E A+
Sbjct: 204 KPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKE 263
Query: 128 VFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLKE 12
VF+++Q K++VSW SM+ + G + + LF+ M +E
Sbjct: 264 VFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEE 302
Score = 73.2 bits (178), Expect = 2e-11
Identities = 32/97 (32%), Positives = 57/97 (58%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
++ DA T+ S L AC+ L + GK +H + + ++M++ + MYAKC E+A
Sbjct: 102 LKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAI 161
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDM 21
+FD++ +D+ SW +++ + GQ KAL LF++M
Sbjct: 162 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 198
Score = 64.7 bits (156), Expect = 8e-09
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
+R T +S L AC++ L+ GK IH I + +E++ + ++L+D+Y KCG + A+
Sbjct: 304 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 363
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLK 15
VF + ++VSW M+ + G +AL +F DM K
Sbjct: 364 NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 402
>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 122 bits (307), Expect = 2e-26
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
V+ DA+TFTS L AC+QL+ LE+GKEIH I LE NE++M ALLDMYAKCG V+EA
Sbjct: 597 VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL 656
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDM 21
+F++L +D VSWTSM+ A+GSHGQA +AL LF+ M
Sbjct: 657 HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 693
Score = 84.3 bits (207), Expect = 9e-15
Identities = 38/99 (38%), Positives = 64/99 (64%)
Frame = -2
Query: 308 RADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQM 129
+ D+VT T+ +S+C +L LE+GKEIH ++ + + +AL+DMY KCG +E A+
Sbjct: 396 KPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKE 455
Query: 128 VFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLKE 12
VF+++Q K++VSW SM+ + G + + LF+ M +E
Sbjct: 456 VFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEE 494
Score = 73.2 bits (178), Expect = 2e-11
Identities = 32/97 (32%), Positives = 57/97 (58%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
++ DA T+ S L AC+ L + GK +H + + ++M++ + MYAKC E+A
Sbjct: 294 LKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAI 353
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDM 21
+FD++ +D+ SW +++ + GQ KAL LF++M
Sbjct: 354 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 390
Score = 64.7 bits (156), Expect = 8e-09
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = -2
Query: 311 VRADAVTFTSALSACTQLSALEQGKEIHQQIKADDLESNEILMTALLDMYAKCGGVEEAQ 132
+R T +S L AC++ L+ GK IH I + +E++ + ++L+D+Y KCG + A+
Sbjct: 496 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 555
Query: 131 MVFDKLQVKDIVSWTSMVVAHGSHGQASKALNLFQDMLK 15
VF + ++VSW M+ + G +AL +F DM K
Sbjct: 556 NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 594