BLASTX nr result

ID: Dioscorea21_contig00039931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039931
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319704.1| hypothetical protein POPTRDRAFT_773840 [Popu...   174   9e-42
gb|AFZ78605.1| expansin protein [Populus tomentosa]                   171   8e-41
ref|XP_002297611.1| hypothetical protein POPTRDRAFT_547568 [Popu...   171   8e-41
gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|g...   170   1e-40
gb|ACM90161.1| expansin 3 [Pyrus pyrifolia]                           170   1e-40

>ref|XP_002319704.1| hypothetical protein POPTRDRAFT_773840 [Populus trichocarpa]
           gi|222858080|gb|EEE95627.1| hypothetical protein
           POPTRDRAFT_773840 [Populus trichocarpa]
          Length = 242

 Score =  174 bits (440), Expect = 9e-42
 Identities = 85/101 (84%), Positives = 89/101 (88%)
 Frame = +1

Query: 1   VACEKKGGIRFTINGHSYFNLVLITNVGGAGDVVTVSIKGSSNTDYQPMSRNWGQNWQSN 180
           VAC K GGIRFTINGHSYFNLVLITNVGGAGDVV+VSIKGS  T +QPMSRNWGQNWQSN
Sbjct: 143 VACRKTGGIRFTINGHSYFNLVLITNVGGAGDVVSVSIKGS-RTGWQPMSRNWGQNWQSN 201

Query: 181 TYLNGQALSFKVYTSDGACITSVNVAPSNWAFGQTYTGGQF 303
           +YLNGQALSFKV TSDG  I S NVAP NWAFGQT+ GGQF
Sbjct: 202 SYLNGQALSFKVTTSDGRSIISSNVAPPNWAFGQTFHGGQF 242


>gb|AFZ78605.1| expansin protein [Populus tomentosa]
          Length = 247

 Score =  171 bits (432), Expect = 8e-41
 Identities = 82/101 (81%), Positives = 89/101 (88%)
 Frame = +1

Query: 1   VACEKKGGIRFTINGHSYFNLVLITNVGGAGDVVTVSIKGSSNTDYQPMSRNWGQNWQSN 180
           VAC K GGIRFTINGHSYFNLVLITNVGGAGDVV VSIKG+++ ++Q MSRNWGQNWQSN
Sbjct: 148 VACRKSGGIRFTINGHSYFNLVLITNVGGAGDVVAVSIKGTTS-NWQAMSRNWGQNWQSN 206

Query: 181 TYLNGQALSFKVYTSDGACITSVNVAPSNWAFGQTYTGGQF 303
           TYLN QALSF+V TSDG  + S NVAPSNWAFGQTYTG QF
Sbjct: 207 TYLNNQALSFRVTTSDGRTVVSNNVAPSNWAFGQTYTGSQF 247


>ref|XP_002297611.1| hypothetical protein POPTRDRAFT_547568 [Populus trichocarpa]
           gi|222844869|gb|EEE82416.1| hypothetical protein
           POPTRDRAFT_547568 [Populus trichocarpa]
          Length = 247

 Score =  171 bits (432), Expect = 8e-41
 Identities = 83/101 (82%), Positives = 88/101 (87%)
 Frame = +1

Query: 1   VACEKKGGIRFTINGHSYFNLVLITNVGGAGDVVTVSIKGSSNTDYQPMSRNWGQNWQSN 180
           VAC K GGIRFTINGHSYFNLVLITNVGGAGDVV VSIKG+ + ++Q MSRNWGQNWQSN
Sbjct: 148 VACRKSGGIRFTINGHSYFNLVLITNVGGAGDVVAVSIKGTKS-NWQAMSRNWGQNWQSN 206

Query: 181 TYLNGQALSFKVYTSDGACITSVNVAPSNWAFGQTYTGGQF 303
           TYLN QALSFKV TSDG  + S NVAPSNWAFGQTYTG QF
Sbjct: 207 TYLNNQALSFKVTTSDGRTVVSNNVAPSNWAFGQTYTGRQF 247


>gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|gb|AAK48846.1|AF350937_1
           expansin [Prunus cerasus]
          Length = 254

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/101 (80%), Positives = 89/101 (88%)
 Frame = +1

Query: 1   VACEKKGGIRFTINGHSYFNLVLITNVGGAGDVVTVSIKGSSNTDYQPMSRNWGQNWQSN 180
           V C KKGGIRFTINGHSYFNLVLITNVGGAGDV +VSIKGS  T +QPMSRNWGQNWQSN
Sbjct: 155 VPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKGS-RTGWQPMSRNWGQNWQSN 213

Query: 181 TYLNGQALSFKVYTSDGACITSVNVAPSNWAFGQTYTGGQF 303
           TYLNGQ+LSF+V TSDG  +T+ NVAP NW FGQT++GGQF
Sbjct: 214 TYLNGQSLSFQVTTSDGRTVTNYNVAPGNWQFGQTFSGGQF 254


>gb|ACM90161.1| expansin 3 [Pyrus pyrifolia]
          Length = 254

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/101 (80%), Positives = 89/101 (88%)
 Frame = +1

Query: 1   VACEKKGGIRFTINGHSYFNLVLITNVGGAGDVVTVSIKGSSNTDYQPMSRNWGQNWQSN 180
           V C KKGGIRFTINGHSYFNLVLITNV GAGDV +VSIKGS  T +QPMSRNWGQNWQSN
Sbjct: 155 VPCMKKGGIRFTINGHSYFNLVLITNVAGAGDVYSVSIKGS-RTGWQPMSRNWGQNWQSN 213

Query: 181 TYLNGQALSFKVYTSDGACITSVNVAPSNWAFGQTYTGGQF 303
           +YLNGQALSF+V TSDG+ +TS NVAP NW FGQT++GGQF
Sbjct: 214 SYLNGQALSFQVTTSDGSTVTSYNVAPGNWQFGQTFSGGQF 254


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