BLASTX nr result

ID: Dioscorea21_contig00039930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039930
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569492.1| PREDICTED: F-box/kelch-repeat protein At3g61...   109   3e-22
ref|XP_003554742.1| PREDICTED: F-box/kelch-repeat protein At3g61...   102   3e-20
ref|XP_002276444.1| PREDICTED: F-box/kelch-repeat protein At3g61...   102   3e-20
ref|XP_004133825.1| PREDICTED: F-box/kelch-repeat protein At3g61...   102   4e-20
ref|NP_191718.1| F-box/kelch-repeat protein [Arabidopsis thalian...   102   4e-20

>ref|XP_003569492.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Brachypodium
           distachyon]
          Length = 405

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/89 (56%), Positives = 62/89 (69%)
 Frame = +2

Query: 2   YNITLPCDVKSNWISSSSCGLVCFMENDKSNEIHVFNPLVKGWKSLQGPPGGDNPDYSAL 181
           Y++ L C +KS+   SSSCGLVCFM+ND  N I V NP+ K WK L  PPG   PDYS +
Sbjct: 116 YDLELQCIIKSSCFVSSSCGLVCFMDNDNRNVISVSNPITKDWKRLMEPPGAKFPDYSTV 175

Query: 182 AMFANRKSSVYTVTVAKSKQVPGDFLQWE 268
           AM  +R S  YTVT+AKS QVP D++QW+
Sbjct: 176 AMMVDRVSHNYTVTLAKSNQVPDDYVQWD 204


>ref|XP_003554742.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Glycine max]
          Length = 405

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/89 (52%), Positives = 62/89 (69%)
 Frame = +2

Query: 2   YNITLPCDVKSNWISSSSCGLVCFMENDKSNEIHVFNPLVKGWKSLQGPPGGDNPDYSAL 181
           Y I LPC   SNW  +SS G+VCFM+ND  +EI + NP+ K ++ L+ PPG    DYSAL
Sbjct: 117 YRIELPCIGTSNWFIASSYGMVCFMDNDSRSEICICNPITKTYRKLEEPPGLKVSDYSAL 176

Query: 182 AMFANRKSSVYTVTVAKSKQVPGDFLQWE 268
           A+  NR+S  YTV + KSKQVP +F+QW+
Sbjct: 177 AISVNRESHCYTVAIVKSKQVPENFVQWD 205


>ref|XP_002276444.1| PREDICTED: F-box/kelch-repeat protein At3g61590 [Vitis vinifera]
           gi|297745382|emb|CBI40462.3| unnamed protein product
           [Vitis vinifera]
          Length = 413

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/89 (52%), Positives = 63/89 (70%)
 Frame = +2

Query: 2   YNITLPCDVKSNWISSSSCGLVCFMENDKSNEIHVFNPLVKGWKSLQGPPGGDNPDYSAL 181
           Y+I LPC   SNW  +SS GLVCFM++D  +E+++ NP+ K  K L+ PPG    DYSAL
Sbjct: 117 YSIELPCINTSNWFITSSSGLVCFMDSDSRSELYICNPVTKRCKRLEEPPGLKFSDYSAL 176

Query: 182 AMFANRKSSVYTVTVAKSKQVPGDFLQWE 268
           A+  NR S  YT+++ KSKQVPG+F QW+
Sbjct: 177 AISVNRISHHYTISIVKSKQVPGNFFQWD 205


>ref|XP_004133825.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Cucumis
           sativus] gi|449480293|ref|XP_004155853.1| PREDICTED:
           F-box/kelch-repeat protein At3g61590-like [Cucumis
           sativus]
          Length = 405

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/89 (56%), Positives = 60/89 (67%)
 Frame = +2

Query: 2   YNITLPCDVKSNWISSSSCGLVCFMENDKSNEIHVFNPLVKGWKSLQGPPGGDNPDYSAL 181
           Y I LPC  KSN   +SSCGLVCFM+ND  +E+HV NP+ K    L  P G    DYSAL
Sbjct: 117 YAIDLPCIDKSNCFIASSCGLVCFMDNDSRSELHVCNPITKCSMKLPEPLGSKFSDYSAL 176

Query: 182 AMFANRKSSVYTVTVAKSKQVPGDFLQWE 268
           A+  NR S  YT++V KSKQVPG+F QW+
Sbjct: 177 AISVNRVSHNYTISVVKSKQVPGNFFQWD 205


>ref|NP_191718.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|334186190|ref|NP_001190155.1| F-box/kelch-repeat
           protein [Arabidopsis thaliana]
           gi|75183486|sp|Q9M310.1|FBK77_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g61590
           gi|14423514|gb|AAK62439.1|AF386994_1 putative protein
           [Arabidopsis thaliana] gi|6850850|emb|CAB71089.1|
           putative protein [Arabidopsis thaliana]
           gi|23197692|gb|AAN15373.1| putative protein [Arabidopsis
           thaliana] gi|332646706|gb|AEE80227.1| F-box/kelch-repeat
           protein [Arabidopsis thaliana]
           gi|332646707|gb|AEE80228.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 411

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 7/96 (7%)
 Frame = +2

Query: 2   YNITLPCDVKSNWISSSSCGLVCFMENDKSNEIHVFNPLVKGWKSLQGPPGGDNPDYSAL 181
           Y+  LPC   SNW  +SSCGLVCFM+ND  N+I+V NP+ K W++L  PPG  + DY+A+
Sbjct: 116 YSFDLPCIETSNWFVASSCGLVCFMDNDCRNKIYVSNPITKQWRTLIEPPGHKSTDYTAM 175

Query: 182 AMFANRKSSV-------YTVTVAKSKQVPGDFLQWE 268
           +   NR +         Y+V++ KSKQVPG+F QW+
Sbjct: 176 STSVNRANQAVNRANRSYSVSIVKSKQVPGNFFQWD 211


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