BLASTX nr result

ID: Dioscorea21_contig00039919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039919
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328770.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_003548639.1| PREDICTED: ribosome biogenesis protein BOP1 ...   133   2e-29
ref|XP_003540150.1| PREDICTED: ribosome biogenesis protein BOP1 ...   133   2e-29
ref|XP_003635118.1| PREDICTED: ribosome biogenesis protein BOP1 ...   132   2e-29
emb|CBI25674.3| unnamed protein product [Vitis vinifera]              132   2e-29

>ref|XP_002328770.1| predicted protein [Populus trichocarpa] gi|222839068|gb|EEE77419.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/67 (91%), Positives = 63/67 (94%)
 Frame = +2

Query: 2   SQPYKTLKIHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLVVPLEILRG 181
           S+PYK LK HPKDITNVAFHRSYPLFASCSDDCTAYVFHG VYSDLNQNPL+VPLEILRG
Sbjct: 481 SKPYKVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGTVYSDLNQNPLIVPLEILRG 540

Query: 182 HTSSNGR 202
           H SSNGR
Sbjct: 541 HASSNGR 547


>ref|XP_003548639.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Glycine max]
          Length = 718

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/67 (89%), Positives = 63/67 (94%)
 Frame = +2

Query: 2   SQPYKTLKIHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLVVPLEILRG 181
           S+PYK LK HPKDI NV FHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPL+VPLEILRG
Sbjct: 624 SKPYKILKCHPKDINNVIFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRG 683

Query: 182 HTSSNGR 202
           HT+SNGR
Sbjct: 684 HTNSNGR 690


>ref|XP_003540150.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Glycine max]
          Length = 716

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/67 (89%), Positives = 63/67 (94%)
 Frame = +2

Query: 2   SQPYKTLKIHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLVVPLEILRG 181
           S+PYK LK HPKDI NV FHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPL+VPLEILRG
Sbjct: 622 SKPYKILKCHPKDINNVIFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRG 681

Query: 182 HTSSNGR 202
           HT+SNGR
Sbjct: 682 HTNSNGR 688


>ref|XP_003635118.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Vitis
           vinifera]
          Length = 691

 Score =  132 bits (333), Expect = 2e-29
 Identities = 59/67 (88%), Positives = 64/67 (95%)
 Frame = +2

Query: 2   SQPYKTLKIHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLVVPLEILRG 181
           SQPY+ LK HPKDITNVAFH SYPLFA+CSDDCTAYVFHGMVYSDLNQNPL+VPLEILRG
Sbjct: 624 SQPYRILKCHPKDITNVAFHHSYPLFATCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRG 683

Query: 182 HTSSNGR 202
           H+S+NGR
Sbjct: 684 HSSTNGR 690


>emb|CBI25674.3| unnamed protein product [Vitis vinifera]
          Length = 706

 Score =  132 bits (333), Expect = 2e-29
 Identities = 59/67 (88%), Positives = 64/67 (95%)
 Frame = +2

Query: 2   SQPYKTLKIHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLVVPLEILRG 181
           SQPY+ LK HPKDITNVAFH SYPLFA+CSDDCTAYVFHGMVYSDLNQNPL+VPLEILRG
Sbjct: 628 SQPYRILKCHPKDITNVAFHHSYPLFATCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRG 687

Query: 182 HTSSNGR 202
           H+S+NGR
Sbjct: 688 HSSTNGR 694


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