BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039905
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS46110.1| photosystem II M protein [Oryza sativa Japonica G...    87   1e-15
gb|ADD63027.1| photosystem II protein M [Potamophila parviflora]       87   1e-15
gb|ADD63094.1| photosystem II protein M [Microlaena stipoides]         82   6e-14
ref|XP_002888353.1| hypothetical protein ARALYDRAFT_893970 [Arab...    76   3e-12
ref|XP_003605618.1| Photosystem II reaction center protein M [Me...    70   2e-10

>gb|AAS46110.1| photosystem II M protein [Oryza sativa Japonica Group]
           gi|42795608|gb|AAS46173.1| photosystem II M protein
           [Oryza sativa Japonica Group]
           gi|290790563|gb|ADD62823.1| photosystem II protein M
           [Oryza sativa Japonica Group]
           gi|290790632|gb|ADD62891.1| photosystem II protein M
           [Oryza meridionalis] gi|290790701|gb|ADD62959.1|
           photosystem II protein M [Oryza australiensis]
          Length = 69

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/53 (86%), Positives = 47/53 (88%)
 Frame = +1

Query: 10  FSSLWD*IPSYCETKNNEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 168
           F S WD IPSYCE K  E+MEVNILAFIATALFILVPTAFLLIIYVKTVSQND
Sbjct: 19  FPSPWDYIPSYCEKK--EVMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 69


>gb|ADD63027.1| photosystem II protein M [Potamophila parviflora]
          Length = 69

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/53 (86%), Positives = 47/53 (88%)
 Frame = +1

Query: 10  FSSLWD*IPSYCETKNNEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 168
           F S WD IPSYCE K  E+MEVNILAFIATALFILVPTAFLLIIYVKTVSQND
Sbjct: 19  FYSPWDYIPSYCEKK--EVMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 69


>gb|ADD63094.1| photosystem II protein M [Microlaena stipoides]
          Length = 69

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/53 (83%), Positives = 45/53 (84%)
 Frame = +1

Query: 10  FSSLWD*IPSYCETKNNEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 168
           F S WD IPSY E K  E+MEVNILAFIATALFILVPTAFLLIIYVKT SQND
Sbjct: 19  FPSPWDYIPSYYEKK--EVMEVNILAFIATALFILVPTAFLLIIYVKTASQND 69


>ref|XP_002888353.1| hypothetical protein ARALYDRAFT_893970 [Arabidopsis lyrata subsp.
           lyrata] gi|297334194|gb|EFH64612.1| hypothetical protein
           ARALYDRAFT_893970 [Arabidopsis lyrata subsp. lyrata]
          Length = 120

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 4/55 (7%)
 Frame = -2

Query: 174 KLIILTNCFYVDDK*KSSRN*NKECSSNKCENIYFHNLIV----FCFTITRDLIP 22
           KLIILTN FYV+ K KSSRN N+EC SNKC+NIYFHNLIV    F F I+RDLIP
Sbjct: 66  KLIILTNGFYVNYKQKSSRNENEECGSNKCKNIYFHNLIVYYYYFFFLISRDLIP 120


>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
           gi|355506673|gb|AES87815.1| Photosystem II reaction
           center protein M [Medicago truncatula]
          Length = 164

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = +1

Query: 52  KNNEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 168
           +N EIMEVNILAFIATALFILVPTAFLLIIYVKTVSQ+D
Sbjct: 126 ENIEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQSD 164