BLASTX nr result

ID: Dioscorea21_contig00039900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039900
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japo...    58   9e-07
gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indi...    58   9e-07
ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group] g...    58   9e-07
ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat...    57   1e-06
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
          Length = 706

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 21/27 (77%), Positives = 26/27 (96%)
 Frame = +3

Query: 6   FNRIVIVRDRNRFHHFKNGACSCKNYW 86
           FNR +++RDRNRFHHFK+GACSCK+YW
Sbjct: 680 FNREIVMRDRNRFHHFKDGACSCKDYW 706


>gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
          Length = 706

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 21/27 (77%), Positives = 26/27 (96%)
 Frame = +3

Query: 6   FNRIVIVRDRNRFHHFKNGACSCKNYW 86
           FNR +++RDRNRFHHFK+GACSCK+YW
Sbjct: 680 FNREIVMRDRNRFHHFKDGACSCKDYW 706


>ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
           gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa
           Japonica Group]
          Length = 699

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 21/27 (77%), Positives = 26/27 (96%)
 Frame = +3

Query: 6   FNRIVIVRDRNRFHHFKNGACSCKNYW 86
           FNR +++RDRNRFHHFK+GACSCK+YW
Sbjct: 673 FNREIVMRDRNRFHHFKDGACSCKDYW 699


>ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Glycine max]
          Length = 616

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +3

Query: 6   FNRIVIVRDRNRFHHFKNGACSCKNYW 86
           FNR +IVRDRNRFHHFK+G CSCK+YW
Sbjct: 590 FNREIIVRDRNRFHHFKDGECSCKDYW 616


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = +3

Query: 6   FNRIVIVRDRNRFHHFKNGACSCKNYW 86
           FNR +I RDRNRFHHFK+G+CSCK+YW
Sbjct: 710 FNREIIARDRNRFHHFKDGSCSCKDYW 736


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