BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039879
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]   137   9e-31
ref|XP_003613604.1| Pentatricopeptide repeat-containing protein ...   124   1e-26
ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_002520126.1| pentatricopeptide repeat-containing protein,...   114   6e-24

>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
           [Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
           protein product [Vitis vinifera]
          Length = 617

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/126 (52%), Positives = 95/126 (75%)
 Frame = +2

Query: 2   VYVSTSLVTMYSNCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMIL 181
           +YV+T++VTMYSNC E+  A++VF  +  KN+VSYNA ISG L+NG   +V  +F++++ 
Sbjct: 166 IYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLE 225

Query: 182 SSGERPNSSTLVSILSACSDLSTLKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLE 361
           SSGE PNS TLVSILSACS L  ++ G+Q+H  ++K E+N   M+ TAL+++YSKCGC  
Sbjct: 226 SSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWH 285

Query: 362 FAFRIF 379
           +A+ IF
Sbjct: 286 WAYGIF 291



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/126 (37%), Positives = 72/126 (57%)
 Frame = +2

Query: 2   VYVSTSLVTMYSNCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMIL 181
           +Y +T+L  MY   + +  A +VF  M  +NL S N  ISGF RNG        F+ + L
Sbjct: 68  IYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGL 127

Query: 182 SSGERPNSSTLVSILSACSDLSTLKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLE 361
            +  RPNS T+ S+L AC+   ++++  QVHC  IK  V + + + TA++ +YS CG L 
Sbjct: 128 GNF-RPNSVTIASVLPACA---SVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELV 183

Query: 362 FAFRIF 379
            A ++F
Sbjct: 184 LAKKVF 189



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 35/159 (22%)
 Frame = +2

Query: 8   VSTSLVTMYSNCNEIRSAQRVFL-LMHSKNLVSYNAMISGFLRNGLV------------- 145
           V T+LV MYS C     A  +F+ L  S+NLV++N+MI+G + NG               
Sbjct: 270 VGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPE 329

Query: 146 ---------------------VMVSYIFRNMILSSGERPNSSTLVSILSACSDLSTLKIG 262
                                V+ ++ F + + S+G   +  ++ S+L ACS LS L+ G
Sbjct: 330 GLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSG 389

Query: 263 KQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLEFAFRIF 379
           K++H + I+  ++T   I TAL+++Y KCG    A R+F
Sbjct: 390 KEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVF 428



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +2

Query: 5   YVSTSLVTMYSNCNEIRSAQRVFLLMHSK--NLVSYNAMISGFLRNGLVVMVSYIFRNMI 178
           ++ST+L+ MY  C     A+RVF     K  +   +NAMISG+ RNG       IF N +
Sbjct: 406 FISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIF-NQM 464

Query: 179 LSSGERPNSSTLVSILSACSDLSTLKIGKQV 271
                +PNS+TLVSILS CS    +  G Q+
Sbjct: 465 QEEKVQPNSATLVSILSVCSHTGEIDRGWQL 495


>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
          Length = 677

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/126 (52%), Positives = 95/126 (75%)
 Frame = +2

Query: 2   VYVSTSLVTMYSNCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMIL 181
           +YV+T++VTMYSNC E+  A++VF  +  KN+VSYNA ISG L+NG   +V  +F++++ 
Sbjct: 226 IYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLE 285

Query: 182 SSGERPNSSTLVSILSACSDLSTLKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLE 361
           SSGE PNS TLVSILSACS L  ++ G+Q+H  ++K E+N   M+ TAL+++YSKCGC  
Sbjct: 286 SSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWH 345

Query: 362 FAFRIF 379
           +A+ IF
Sbjct: 346 WAYGIF 351



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/126 (37%), Positives = 72/126 (57%)
 Frame = +2

Query: 2   VYVSTSLVTMYSNCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMIL 181
           +Y +T+L  MY   + +  A +VF  M  +NL S N  ISGF RNG        F+ + L
Sbjct: 128 IYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGL 187

Query: 182 SSGERPNSSTLVSILSACSDLSTLKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLE 361
            +  RPNS T+ S+L AC+   ++++  QVHC  IK  V + + + TA++ +YS CG L 
Sbjct: 188 GNF-RPNSVTIASVLPACA---SVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELV 243

Query: 362 FAFRIF 379
            A ++F
Sbjct: 244 LAKKVF 249



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 35/159 (22%)
 Frame = +2

Query: 8   VSTSLVTMYSNCNEIRSAQRVFL-LMHSKNLVSYNAMISGFLRNGLV------------- 145
           V T+LV MYS C     A  +F+ L  S+NLV++N+MI+G + NG               
Sbjct: 330 VGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPE 389

Query: 146 ---------------------VMVSYIFRNMILSSGERPNSSTLVSILSACSDLSTLKIG 262
                                V+ ++ F + + S+G   +  ++ S+L ACS LS L+ G
Sbjct: 390 GLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSG 449

Query: 263 KQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLEFAFRIF 379
           K++H + I+  ++T   I TAL+++Y KCG    A R+F
Sbjct: 450 KEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVF 488



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +2

Query: 5   YVSTSLVTMYSNCNEIRSAQRVFLLMHSK--NLVSYNAMISGFLRNGLVVMVSYIFRNMI 178
           ++ST+L+ MY  C     A+RVF     K  +   +NAMISG+ RNG       IF N +
Sbjct: 466 FISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIF-NQM 524

Query: 179 LSSGERPNSSTLVSILSACSDLSTLKIGKQV 271
                +PNS+TLVSILS CS    +  G Q+
Sbjct: 525 QEEKVQPNSATLVSILSVCSHTGEIDRGWQL 555


>ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514939|gb|AES96562.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/126 (48%), Positives = 89/126 (70%)
 Frame = +2

Query: 2   VYVSTSLVTMYSNCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMIL 181
           VYVSTSLVT YS C  + S+ +VF  +  KN+V+YNA +SG L+NG   +V  +F++M +
Sbjct: 171 VYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTM 230

Query: 182 SSGERPNSSTLVSILSACSDLSTLKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLE 361
           +  E+PN  TLVS++SAC+ LS +++GKQVH   +K E    VM+ T+L+++YSKCGC  
Sbjct: 231 NLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWG 290

Query: 362 FAFRIF 379
            AF +F
Sbjct: 291 SAFDVF 296



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 35/161 (21%)
 Frame = +2

Query: 2   VYVSTSLVTMYSNCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMIL 181
           V V TSLV MYS C    SA  VF     +NL+++N+MI+G + N        +F  M+ 
Sbjct: 273 VMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMV- 331

Query: 182 SSGERPNSST-----------------------------------LVSILSACSDLSTLK 256
             G  P+S+T                                   L S+LS C D   L+
Sbjct: 332 DEGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLR 391

Query: 257 IGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLEFAFRIF 379
             K +H Y ++  V+    + TAL++ Y KCGC+ FA  +F
Sbjct: 392 SAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVF 432



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   YVSTSLVTMYS-NCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMIL 181
           + ST+L+  Y+ N      A  +F  M    + ++NA++SG  RNG      ++FR +  
Sbjct: 71  HTSTALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGF 130

Query: 182 SSGERPNSSTLVSILSACSDLSTLKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLE 361
            +  RPNS T+VS+LSA  D+      +QVHC   K  V   V + T+L+  YSKCG L 
Sbjct: 131 WN-IRPNSVTIVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLV 188

Query: 362 FAFRIF 379
            + ++F
Sbjct: 189 SSNKVF 194


>ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Glycine max]
          Length = 627

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/130 (46%), Positives = 87/130 (66%), Gaps = 5/130 (3%)
 Frame = +2

Query: 5   YVSTSLVTMYSNCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMILS 184
           YV+TSLVT Y  C E+ SA +VF  +  K++VSYNA +SG L+NG+  +V  +F+ M+  
Sbjct: 173 YVATSLVTAYCKCGEVVSASKVFEELPVKSVVSYNAFVSGLLQNGVPRLVLDVFKEMM-- 230

Query: 185 SGE-----RPNSSTLVSILSACSDLSTLKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKC 349
            GE     + NS TLVS+LSAC  L +++ G+QVH  ++K E   GVM+ TAL+++YSKC
Sbjct: 231 RGEECVECKLNSVTLVSVLSACGSLQSIRFGRQVHGVVVKLEAGDGVMVMTALVDMYSKC 290

Query: 350 GCLEFAFRIF 379
           G    AF +F
Sbjct: 291 GFWRSAFEVF 300



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 37/163 (22%)
 Frame = +2

Query: 2   VYVSTSLVTMYSNCNEIRSAQRVFLLMHS--KNLVSYNAMISGFLRNGLVVMVSYIFRNM 175
           V V T+LV MYS C   RSA  VF  +    +NL+++N+MI+G + N        +F+ +
Sbjct: 277 VMVMTALVDMYSKCGFWRSAFEVFTGVEGNRRNLITWNSMIAGMMLNKESERAVDMFQRL 336

Query: 176 ILSSGERPNSST-----------------------------------LVSILSACSDLST 250
             S G +P+S+T                                   + S+LSAC+D S 
Sbjct: 337 E-SEGLKPDSATWNSMISGFAQLGECGEAFKYFGQMQSVGVAPCLKIVTSLLSACADSSM 395

Query: 251 LKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLEFAFRIF 379
           L+ GK++H   ++ ++N    + TAL+++Y KCG   +A  +F
Sbjct: 396 LQHGKEIHGLSLRTDINRDDFLVTALVDMYMKCGLASWARGVF 438


>ref|XP_002520126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540618|gb|EEF42181.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 593

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/126 (44%), Positives = 86/126 (68%)
 Frame = +2

Query: 2   VYVSTSLVTMYSNCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMIL 181
           VYV+TSLVT YS C  +  A +VF  M ++ +VSYNA +SG L NG+  +V  +F++M  
Sbjct: 269 VYVATSLVTTYSGCGHLTLATKVFGEMPNRTVVSYNAFVSGLLHNGVTNVVLKVFKDMRE 328

Query: 182 SSGERPNSSTLVSILSACSDLSTLKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLE 361
            S  +PNS TLVS+++ACS L  ++ G QVH +L K ++    M+ T+L+++YSKCG  +
Sbjct: 329 YSTLKPNSLTLVSVIAACSTLLYIQFGMQVHVFLKKTQMGCDTMVGTSLVDMYSKCGYWK 388

Query: 362 FAFRIF 379
           +A+ +F
Sbjct: 389 WAYNVF 394



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/126 (36%), Positives = 69/126 (54%)
 Frame = +2

Query: 2   VYVSTSLVTMYSNCNEIRSAQRVFLLMHSKNLVSYNAMISGFLRNGLVVMVSYIFRNMIL 181
           +Y +T+L +MY     +  A +VF  M  +N  S+NA ISGF + G  +    +F+ M  
Sbjct: 171 IYTATALTSMYMQLALLPDAMKVFDEMPDRNQASFNATISGFSQKGCCMEALIVFKEMAF 230

Query: 182 SSGERPNSSTLVSILSACSDLSTLKIGKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLE 361
             G RPNS T+ S+L AC    ++ +  Q+HC  IK  V   V + T+L+  YS CG L 
Sbjct: 231 -CGFRPNSVTIASVLPAC---DSVDLSVQMHCCAIKLGVEMDVYVATSLVTTYSGCGHLT 286

Query: 362 FAFRIF 379
            A ++F
Sbjct: 287 LATKVF 292



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 36/160 (22%)
 Frame = +2

Query: 8   VSTSLVTMYSNCNEIRSAQRVFLLMH-SKNLVSYNAMISGFLRNGLVVMVSYIFRNMILS 184
           V TSLV MYS C   + A  VF  M+ +KNL+++N+MI+G + N        +F  ++ S
Sbjct: 373 VGTSLVDMYSKCGYWKWAYNVFNEMNDNKNLITWNSMIAGMMLNAQSQNAIELFE-LLES 431

Query: 185 SGERPNSST-----------------------------------LVSILSACSDLSTLKI 259
            G  P+S+T                                   + S+L+AC+ L+ L+ 
Sbjct: 432 QGLEPDSATWNSMISGFEQLDKGVEAFKFFKKMQLSGMVPSLKSVTSLLAACASLTALQC 491

Query: 260 GKQVHCYLIKCEVNTGVMIQTALMEVYSKCGCLEFAFRIF 379
           GK++H ++++  +N    + T L+++Y KCG   +  R+F
Sbjct: 492 GKEIHGHVVRTNMNFDEFMATGLIDMYMKCGFSLWGQRVF 531