BLASTX nr result

ID: Dioscorea21_contig00039844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039844
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
emb|CBI28140.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_003610748.1| Pentatricopeptide repeat-containing protein ...   107   1e-21
emb|CBI26289.3| unnamed protein product [Vitis vinifera]              104   9e-21

>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  110 bits (274), Expect = 2e-22
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = -1

Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248
           K+A+AYGLI T QG PIR+VKNLR+C DCHSF K +S +Y+REI +RDNNR+HFF +G C
Sbjct: 771 KLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFC 830

Query: 247 SCRDYW 230
           SCRDYW
Sbjct: 831 SCRDYW 836


>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  107 bits (266), Expect = 1e-21
 Identities = 43/66 (65%), Positives = 55/66 (83%)
 Frame = -1

Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248
           K+A+A+GL+ T  G PIR+VKNLR+C DCHS MKF+S +Y+REI +RD NRFH F+KG C
Sbjct: 515 KLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSC 574

Query: 247 SCRDYW 230
           SCRD+W
Sbjct: 575 SCRDFW 580


>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  107 bits (266), Expect = 1e-21
 Identities = 43/66 (65%), Positives = 55/66 (83%)
 Frame = -1

Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248
           K+A+A+GL+ T  G PIR+VKNLR+C DCHS MKF+S +Y+REI +RD NRFH F+KG C
Sbjct: 646 KLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSC 705

Query: 247 SCRDYW 230
           SCRD+W
Sbjct: 706 SCRDFW 711


>ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512083|gb|AES93706.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  107 bits (266), Expect = 1e-21
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = -1

Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248
           K+A+AYGLI T +G PIR+VKNLR+C DCHSF K +S +Y REI +RDNNR+HFF +G C
Sbjct: 763 KLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFC 822

Query: 247 SCRDYW 230
           SCRD+W
Sbjct: 823 SCRDFW 828


>emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  104 bits (259), Expect = 9e-21
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = -1

Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248
           K+A+A+GLI T +  PIR+VKNLR+C DCHSF K  S IY+REI +RDNNRFHFF +G+C
Sbjct: 603 KLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLC 662

Query: 247 SCRDYW 230
           SC DYW
Sbjct: 663 SCCDYW 668


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