BLASTX nr result
ID: Dioscorea21_contig00039844
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00039844 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22 emb|CBI28140.3| unnamed protein product [Vitis vinifera] 107 1e-21 ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21 ref|XP_003610748.1| Pentatricopeptide repeat-containing protein ... 107 1e-21 emb|CBI26289.3| unnamed protein product [Vitis vinifera] 104 9e-21 >ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like [Glycine max] Length = 836 Score = 110 bits (274), Expect = 2e-22 Identities = 46/66 (69%), Positives = 56/66 (84%) Frame = -1 Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248 K+A+AYGLI T QG PIR+VKNLR+C DCHSF K +S +Y+REI +RDNNR+HFF +G C Sbjct: 771 KLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFC 830 Query: 247 SCRDYW 230 SCRDYW Sbjct: 831 SCRDYW 836 >emb|CBI28140.3| unnamed protein product [Vitis vinifera] Length = 580 Score = 107 bits (266), Expect = 1e-21 Identities = 43/66 (65%), Positives = 55/66 (83%) Frame = -1 Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248 K+A+A+GL+ T G PIR+VKNLR+C DCHS MKF+S +Y+REI +RD NRFH F+KG C Sbjct: 515 KLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSC 574 Query: 247 SCRDYW 230 SCRD+W Sbjct: 575 SCRDFW 580 >ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Vitis vinifera] Length = 711 Score = 107 bits (266), Expect = 1e-21 Identities = 43/66 (65%), Positives = 55/66 (83%) Frame = -1 Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248 K+A+A+GL+ T G PIR+VKNLR+C DCHS MKF+S +Y+REI +RD NRFH F+KG C Sbjct: 646 KLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSC 705 Query: 247 SCRDYW 230 SCRD+W Sbjct: 706 SCRDFW 711 >ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 828 Score = 107 bits (266), Expect = 1e-21 Identities = 44/66 (66%), Positives = 55/66 (83%) Frame = -1 Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248 K+A+AYGLI T +G PIR+VKNLR+C DCHSF K +S +Y REI +RDNNR+HFF +G C Sbjct: 763 KLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFC 822 Query: 247 SCRDYW 230 SCRD+W Sbjct: 823 SCRDFW 828 >emb|CBI26289.3| unnamed protein product [Vitis vinifera] Length = 668 Score = 104 bits (259), Expect = 9e-21 Identities = 44/66 (66%), Positives = 54/66 (81%) Frame = -1 Query: 427 KMAVAYGLIGTCQGAPIRIVKNLRICLDCHSFMKFLSAIYDREIAIRDNNRFHFFSKGVC 248 K+A+A+GLI T + PIR+VKNLR+C DCHSF K S IY+REI +RDNNRFHFF +G+C Sbjct: 603 KLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLC 662 Query: 247 SCRDYW 230 SC DYW Sbjct: 663 SCCDYW 668