BLASTX nr result

ID: Dioscorea21_contig00039826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039826
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]    172   3e-41
gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]        169   2e-40
ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group] g...   169   2e-40
gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indi...   169   2e-40

>ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Brachypodium distachyon]
          Length = 522

 Score =  176 bits (447), Expect = 1e-42
 Identities = 78/114 (68%), Positives = 95/114 (83%)
 Frame = -2

Query: 344 GREPDGSEFNMLLDTLCKYGYPKVATEIFNKRKSLFEPDEKAYTIMIYGWCKVKQPEMAR 165
           GREPD  EF  LLDTLCKY YPKVATE+FNKRK  +EP+EK YTI+IYGWCKV + +M++
Sbjct: 179 GREPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYKYEPNEKMYTILIYGWCKVNRNDMSQ 238

Query: 164 KFLNEMADRGLEPNVVTYNVLLNGICRRGNLQPETRFDRVIQAAEDLLEEMRGR 3
           KFL +M D G+EPNVVTYN+LLNG+CR  +L P+ RFDR ++AAEDLL+EMR R
Sbjct: 239 KFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDR 292


>dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 522

 Score =  172 bits (435), Expect = 3e-41
 Identities = 76/114 (66%), Positives = 92/114 (80%)
 Frame = -2

Query: 344 GREPDGSEFNMLLDTLCKYGYPKVATEIFNKRKSLFEPDEKAYTIMIYGWCKVKQPEMAR 165
           GREPD  EF  LLDTLCKY YPKVA E+FNKRK  +EP+EK YTI+IYGWCKV + +MA+
Sbjct: 179 GREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRKYKYEPNEKMYTILIYGWCKVNRSDMAQ 238

Query: 164 KFLNEMADRGLEPNVVTYNVLLNGICRRGNLQPETRFDRVIQAAEDLLEEMRGR 3
           KFL +M D G+EPN+VTYN+LLNGICR  +L P+ RFDR + AAE+LL+EM  R
Sbjct: 239 KFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDR 292


>gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
          Length = 526

 Score =  169 bits (429), Expect = 2e-40
 Identities = 76/113 (67%), Positives = 93/113 (82%)
 Frame = -2

Query: 341 REPDGSEFNMLLDTLCKYGYPKVATEIFNKRKSLFEPDEKAYTIMIYGWCKVKQPEMARK 162
           REPD +EF  LLDTLCKY YPKVATE+FNKRK  + P+EK Y+I+IYGWCKV + +MA+K
Sbjct: 184 REPDAAEFATLLDTLCKYKYPKVATEVFNKRKYKYGPNEKMYSILIYGWCKVNRSDMAKK 243

Query: 161 FLNEMADRGLEPNVVTYNVLLNGICRRGNLQPETRFDRVIQAAEDLLEEMRGR 3
           FL +M   G+EPN+VTYN+LLNGICR  +L P+ RFDR + AAEDLL+EMRGR
Sbjct: 244 FLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGR 296


>ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
           gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa
           Japonica Group] gi|125603197|gb|EAZ42522.1| hypothetical
           protein OsJ_27088 [Oryza sativa Japonica Group]
           gi|215740653|dbj|BAG97309.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 511

 Score =  169 bits (428), Expect = 2e-40
 Identities = 75/114 (65%), Positives = 93/114 (81%)
 Frame = -2

Query: 344 GREPDGSEFNMLLDTLCKYGYPKVATEIFNKRKSLFEPDEKAYTIMIYGWCKVKQPEMAR 165
           GREPD +EF  LLDTLCKY YPKVA E+FNKRK  +EP+EK YT++IYGWCKV + +MA+
Sbjct: 168 GREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKVNRNDMAQ 227

Query: 164 KFLNEMADRGLEPNVVTYNVLLNGICRRGNLQPETRFDRVIQAAEDLLEEMRGR 3
           KFL +M   G+EPN+VTYN+LLNGICR  +L P+ RFDR ++AAEDLL+EM  R
Sbjct: 228 KFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQR 281


>gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
          Length = 511

 Score =  169 bits (428), Expect = 2e-40
 Identities = 75/114 (65%), Positives = 93/114 (81%)
 Frame = -2

Query: 344 GREPDGSEFNMLLDTLCKYGYPKVATEIFNKRKSLFEPDEKAYTIMIYGWCKVKQPEMAR 165
           GREPD +EF  LLDTLCKY YPKVA E+FNKRK  +EP+EK YT++IYGWCKV + +MA+
Sbjct: 168 GREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKVNRNDMAQ 227

Query: 164 KFLNEMADRGLEPNVVTYNVLLNGICRRGNLQPETRFDRVIQAAEDLLEEMRGR 3
           KFL +M   G+EPN+VTYN+LLNGICR  +L P+ RFDR ++AAEDLL+EM  R
Sbjct: 228 KFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQR 281


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