BLASTX nr result

ID: Dioscorea21_contig00039762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039762
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
emb|CBI40500.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]   124   8e-27

>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/93 (59%), Positives = 74/93 (79%)
 Frame = -2

Query: 280 VWGALLGACRNHRNVEIAEIAAKHLFKLEPYNPANYLLMMSIYAYENRWRDVEIMRDAMN 101
           +WGA+L ACR H++++IAEIAA++LF+LEPYN ANY+LMM+IY+   RW DVE ++++M 
Sbjct: 710 IWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMT 769

Query: 100 AAGVKSRAGWSWIQIGQSVHVFHVEGKLHPEIG 2
           A GVK    WSWIQ+ Q++HVF  EGK HPE G
Sbjct: 770 AMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEG 802


>emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/93 (59%), Positives = 73/93 (78%)
 Frame = -2

Query: 280  VWGALLGACRNHRNVEIAEIAAKHLFKLEPYNPANYLLMMSIYAYENRWRDVEIMRDAMN 101
            +WGALLG+CR H+N++ AE AAK+LFKLEP N ANY+LMM++Y+  NRW D++ +R+ M 
Sbjct: 932  IWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMG 991

Query: 100  AAGVKSRAGWSWIQIGQSVHVFHVEGKLHPEIG 2
            AAGV++R  WSWIQI Q VHVF  + K HP+ G
Sbjct: 992  AAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAG 1024


>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/93 (59%), Positives = 73/93 (78%)
 Frame = -2

Query: 280 VWGALLGACRNHRNVEIAEIAAKHLFKLEPYNPANYLLMMSIYAYENRWRDVEIMRDAMN 101
           +WGALLG+CR H+N++ AE AAK+LFKLEP N ANY+LMM++Y+  NRW D++ +R+ M 
Sbjct: 712 IWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMG 771

Query: 100 AAGVKSRAGWSWIQIGQSVHVFHVEGKLHPEIG 2
           AAGV++R  WSWIQI Q VHVF  + K HP+ G
Sbjct: 772 AAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAG 804


>ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|222860966|gb|EEE98508.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/93 (60%), Positives = 69/93 (74%)
 Frame = -2

Query: 280 VWGALLGACRNHRNVEIAEIAAKHLFKLEPYNPANYLLMMSIYAYENRWRDVEIMRDAMN 101
           VWGA+LG+CR H N+E AEIAAK LFKLEPYN ANY+LM+S+YA  NRW DV+ ++D M+
Sbjct: 298 VWGAMLGSCRIHGNIEFAEIAAKELFKLEPYNSANYVLMLSLYAMSNRWEDVDRIKDLMD 357

Query: 100 AAGVKSRAGWSWIQIGQSVHVFHVEGKLHPEIG 2
             G+K R  WSWIQI Q VH+F   G  H + G
Sbjct: 358 TRGIKPRQVWSWIQIDQRVHLFSAGGIPHQDEG 390


>emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/93 (59%), Positives = 72/93 (77%)
 Frame = -2

Query: 280  VWGALLGACRNHRNVEIAEIAAKHLFKLEPYNPANYLLMMSIYAYENRWRDVEIMRDAMN 101
            +WGALLG+CR H+N+  AE AAK+LFKLEP N ANY+LMM++Y+  NRW D++ +R+ M 
Sbjct: 1207 IWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMG 1266

Query: 100  AAGVKSRAGWSWIQIGQSVHVFHVEGKLHPEIG 2
            AAGV++R  WSWIQI Q VHVF  + K HP+ G
Sbjct: 1267 AAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAG 1299


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