BLASTX nr result

ID: Dioscorea21_contig00039696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039696
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272437.1| PREDICTED: medium-chain-fatty-acid--CoA liga...   127   1e-27
ref|XP_002526182.1| AMP dependent ligase, putative [Ricinus comm...   126   2e-27
ref|XP_003600627.1| 2-succinylbenzoate-CoA ligase [Medicago trun...   118   6e-25
ref|XP_003562143.1| PREDICTED: medium-chain-fatty-acid--CoA liga...   117   1e-24
ref|XP_003544957.1| PREDICTED: medium-chain-fatty-acid--CoA liga...   117   1e-24

>ref|XP_002272437.1| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
          Length = 588

 Score =  127 bits (319), Expect = 1e-27
 Identities = 66/103 (64%), Positives = 78/103 (75%), Gaps = 8/103 (7%)
 Frame = -2

Query: 287 AMYEMHFGVPMAGAVLNTINTRLDAANVATLLAHSEAKLLFVDYQFVPLARQALC----- 123
           AMYEMHF VPM GAVLNTIN RLDA N+AT+L HSEAK+ FVDYQ+VPLAR+AL      
Sbjct: 76  AMYEMHFAVPMCGAVLNTINIRLDAHNIATILGHSEAKVFFVDYQYVPLAREALLLLMAQ 135

Query: 122 ---HLPSSAVSPAVIVIDEIDNPTGIRMDGGLEYEQLISGGNP 3
               L + +  P VIVID+ID PTG+R+ G LEYEQL++ GNP
Sbjct: 136 HKEKLVAESSIPLVIVIDDIDTPTGVRL-GELEYEQLVANGNP 177


>ref|XP_002526182.1| AMP dependent ligase, putative [Ricinus communis]
           gi|223534486|gb|EEF36186.1| AMP dependent ligase,
           putative [Ricinus communis]
          Length = 286

 Score =  126 bits (316), Expect = 2e-27
 Identities = 67/99 (67%), Positives = 77/99 (77%), Gaps = 4/99 (4%)
 Frame = -2

Query: 287 AMYEMHFGVPMAGAVLNTINTRLDAANVATLLAHSEAKLLFVDYQFVPLARQALCHL--- 117
           AMYEMHF VPM GA+LNTINTRLDA  +AT+L HSEAK+ FVDY++VPLAR+AL  L   
Sbjct: 76  AMYEMHFAVPMTGAILNTINTRLDAKTIATILRHSEAKVFFVDYEYVPLAREALRLLMDL 135

Query: 116 -PSSAVSPAVIVIDEIDNPTGIRMDGGLEYEQLISGGNP 3
             S A  P VIVID+ID+PTGIR+ G LEYE LI  GNP
Sbjct: 136 VSSEASFPLVIVIDDIDSPTGIRL-GELEYEHLIHRGNP 173


>ref|XP_003600627.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
           gi|355489675|gb|AES70878.1| 2-succinylbenzoate-CoA
           ligase [Medicago truncatula]
          Length = 582

 Score =  118 bits (295), Expect = 6e-25
 Identities = 64/102 (62%), Positives = 76/102 (74%), Gaps = 7/102 (6%)
 Frame = -2

Query: 287 AMYEMHFGVPMAGAVLNTINTRLDAANVATLLAHSEAKLLFVDYQFVPLARQALCHLPSS 108
           AMYEMHF VPMAGAVLNTIN RL+AAN+AT+L HSEAK+ FVDY+FV  A+ AL  L   
Sbjct: 76  AMYEMHFAVPMAGAVLNTINHRLNAANIATILQHSEAKVFFVDYEFVSKAKDALRLLMEE 135

Query: 107 -------AVSPAVIVIDEIDNPTGIRMDGGLEYEQLISGGNP 3
                  +  P VIVID+I+NPTGIR+ G LEYEQ++  GNP
Sbjct: 136 KDQTEQYSSLPLVIVIDDINNPTGIRL-GELEYEQMVHHGNP 176


>ref|XP_003562143.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
           distachyon]
          Length = 613

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/97 (64%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
 Frame = -2

Query: 287 AMYEMHFGVPMAGAVLNTINTRLDAANVATLLAHSEAKLLFVDYQFVPLARQALCHLPSS 108
           AMYEMHF VPMAGAVLNT+NTRLDA  VA +L HSEAKL FVDY++V LA  AL  L S 
Sbjct: 108 AMYEMHFAVPMAGAVLNTVNTRLDAKAVAAILRHSEAKLFFVDYEYVRLASDALQLLVSD 167

Query: 107 AVS--PAVIVIDEIDNPTGIRMDGGLEYEQLISGGNP 3
             S  P V VID++D PTG+R+ G LEYE L+S G+P
Sbjct: 168 GASQVPLVAVIDDLDRPTGVRL-GELEYEGLVSRGDP 203


>ref|XP_003544957.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
          Length = 552

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/102 (58%), Positives = 78/102 (76%), Gaps = 7/102 (6%)
 Frame = -2

Query: 287 AMYEMHFGVPMAGAVLNTINTRLDAANVATLLAHSEAKLLFVDYQFVPLARQAL------ 126
           AMYEMHF VPMAG VLNTINTRLDA N+AT+L HSEAK+LFVDY++VP A++ L      
Sbjct: 76  AMYEMHFAVPMAGGVLNTINTRLDANNIATILLHSEAKVLFVDYEYVPKAKETLELLMGK 135

Query: 125 -CHLPSSAVSPAVIVIDEIDNPTGIRMDGGLEYEQLISGGNP 3
            CH    + +P +I+ID+I++PTG++  G LEYEQL+  G+P
Sbjct: 136 KCH----SSTPLLILIDDINSPTGLQF-GELEYEQLVYNGDP 172


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