BLASTX nr result

ID: Dioscorea21_contig00039686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039686
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527601.1| PREDICTED: probable endo-1,4-beta-xylanase C...   178   5e-43
ref|XP_003523498.1| PREDICTED: exoglucanase xynX-like [Glycine max]   176   2e-42
ref|XP_003604034.1| Endo-1,4-beta-xylanase A [Medicago truncatul...   176   2e-42
gb|EEC74851.1| hypothetical protein OsI_10717 [Oryza sativa Indi...   170   1e-40
ref|NP_001049529.1| Os03g0243700 [Oryza sativa Japonica Group] g...   170   1e-40

>ref|XP_003527601.1| PREDICTED: probable endo-1,4-beta-xylanase C-like [Glycine max]
          Length = 547

 Score =  178 bits (451), Expect = 5e-43
 Identities = 80/100 (80%), Positives = 88/100 (88%)
 Frame = +2

Query: 2   FTRPNIPFMRAVIDKLATLNLPIWLTEIDISKKMDQQTQATYLEEVLREGFSHPSINGIM 181
           FT PN P +RA++DKLATL LPIWLTE+DISK +D+  QA Y EEVLREGFSHPS+NGIM
Sbjct: 398 FTIPNPPLIRAILDKLATLGLPIWLTEVDISKTLDRDAQANYSEEVLREGFSHPSVNGIM 457

Query: 182 LWTALHPNGCYQMCLTDNNFKNLPTGDVVDKLLQEWQTNQ 301
           LWTALHPNGCYQMCLTDNNFKNLP GD VDKLLQEWQT +
Sbjct: 458 LWTALHPNGCYQMCLTDNNFKNLPAGDAVDKLLQEWQTGR 497


>ref|XP_003523498.1| PREDICTED: exoglucanase xynX-like [Glycine max]
          Length = 558

 Score =  176 bits (446), Expect = 2e-42
 Identities = 78/100 (78%), Positives = 89/100 (89%)
 Frame = +2

Query: 2   FTRPNIPFMRAVIDKLATLNLPIWLTEIDISKKMDQQTQATYLEEVLREGFSHPSINGIM 181
           FT PN P +RA++DKLATL LPIWLTE+DISK +D+  QA YLEEVLREGFSHPS+NGIM
Sbjct: 409 FTIPNPPLIRAILDKLATLGLPIWLTEVDISKTLDRDAQANYLEEVLREGFSHPSVNGIM 468

Query: 182 LWTALHPNGCYQMCLTDNNFKNLPTGDVVDKLLQEWQTNQ 301
           LWTA HPNGCYQMCLTDNNFKNLP GDVVDKL++EWQ ++
Sbjct: 469 LWTAFHPNGCYQMCLTDNNFKNLPAGDVVDKLVEEWQISR 508


>ref|XP_003604034.1| Endo-1,4-beta-xylanase A [Medicago truncatula]
           gi|355493082|gb|AES74285.1| Endo-1,4-beta-xylanase A
           [Medicago truncatula]
          Length = 536

 Score =  176 bits (445), Expect = 2e-42
 Identities = 78/99 (78%), Positives = 90/99 (90%)
 Frame = +2

Query: 2   FTRPNIPFMRAVIDKLATLNLPIWLTEIDISKKMDQQTQATYLEEVLREGFSHPSINGIM 181
           FT PN+P +RA++DKLATL+LP+WLTEIDIS  +D  TQA YLE+VLREGFSHPS+NGIM
Sbjct: 387 FTIPNLPLIRAILDKLATLDLPVWLTEIDISNTLDHDTQAIYLEQVLREGFSHPSVNGIM 446

Query: 182 LWTALHPNGCYQMCLTDNNFKNLPTGDVVDKLLQEWQTN 298
           LWTALHP GCYQMCLTDN+F NLP+GDVVDKLLQEWQT+
Sbjct: 447 LWTALHPYGCYQMCLTDNDFNNLPSGDVVDKLLQEWQTS 485


>gb|EEC74851.1| hypothetical protein OsI_10717 [Oryza sativa Indica Group]
           gi|222624549|gb|EEE58681.1| hypothetical protein
           OsJ_10107 [Oryza sativa Japonica Group]
          Length = 717

 Score =  170 bits (430), Expect = 1e-40
 Identities = 76/100 (76%), Positives = 85/100 (85%)
 Frame = +2

Query: 2   FTRPNIPFMRAVIDKLATLNLPIWLTEIDISKKMDQQTQATYLEEVLREGFSHPSINGIM 181
           F +PNIP MRAV+DKLATL LPIW TEIDIS + D QTQA YLE+VLRE +SHP++ G+M
Sbjct: 568 FLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLREAYSHPAVTGVM 627

Query: 182 LWTALHPNGCYQMCLTDNNFKNLPTGDVVDKLLQEWQTNQ 301
           LWTALHPNGCYQMCLTD N  NLP GDVVD+LLQEWQT Q
Sbjct: 628 LWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQ 667


>ref|NP_001049529.1| Os03g0243700 [Oryza sativa Japonica Group]
           gi|113548000|dbj|BAF11443.1| Os03g0243700 [Oryza sativa
           Japonica Group]
          Length = 401

 Score =  170 bits (430), Expect = 1e-40
 Identities = 76/100 (76%), Positives = 85/100 (85%)
 Frame = +2

Query: 2   FTRPNIPFMRAVIDKLATLNLPIWLTEIDISKKMDQQTQATYLEEVLREGFSHPSINGIM 181
           F +PNIP MRAV+DKLATL LPIW TEIDIS + D QTQA YLE+VLRE +SHP++ G+M
Sbjct: 252 FLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLREAYSHPAVTGVM 311

Query: 182 LWTALHPNGCYQMCLTDNNFKNLPTGDVVDKLLQEWQTNQ 301
           LWTALHPNGCYQMCLTD N  NLP GDVVD+LLQEWQT Q
Sbjct: 312 LWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQ 351


Top