BLASTX nr result

ID: Dioscorea21_contig00039665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039665
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001183865.1| uncharacterized protein LOC100502458 [Zea ma...    60   2e-07
ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein A...    58   9e-07
emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]    58   9e-07
ref|XP_004135187.1| PREDICTED: homeobox-leucine zipper protein A...    55   5e-06
ref|XP_002520111.1| homeobox protein, putative [Ricinus communis...    55   5e-06

>ref|NP_001183865.1| uncharacterized protein LOC100502458 [Zea mays]
           gi|238015104|gb|ACR38587.1| unknown [Zea mays]
           gi|408690316|gb|AFU81618.1| HB-type transcription
           factor, partial [Zea mays subsp. mays]
           gi|413956877|gb|AFW89526.1| putative homeobox
           DNA-binding and leucine zipper domain family protein
           [Zea mays]
          Length = 344

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 14/76 (18%)
 Frame = +1

Query: 100 MACNGMSSS---FFPPNFILQM-QPPTENG---HQHQP-PPSNL--SPFLPT----NTQD 237
           MA NGM+SS   FFPPNF+LQM Q P+++    H H P PP +L  +PFLP+    + QD
Sbjct: 4   MASNGMASSLSPFFPPNFLLQMQQTPSDHDPQEHHHLPAPPLHLHHNPFLPSSQCPSLQD 63

Query: 238 LRGMATMLSKRSMSFC 285
            RGMA ML KR   +C
Sbjct: 64  FRGMAPMLRKRPTMYC 79


>ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Vitis
           vinifera]
          Length = 285

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +1

Query: 100 MACNGMSSSFFPPNFILQMQPPTENGHQHQPPPSNLSPFLPTNT-QDLRGMATMLSKRSM 276
           M CNGM+  FFP NF+LQ   P E+ HQ   PP++L+P LP+   QD  G+A++L KRSM
Sbjct: 1   MTCNGMA--FFPANFMLQT--PREDDHQ---PPNSLNPILPSCAPQDFHGVASLLGKRSM 53

Query: 277 SF 282
           SF
Sbjct: 54  SF 55


>emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]
          Length = 285

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +1

Query: 100 MACNGMSSSFFPPNFILQMQPPTENGHQHQPPPSNLSPFLPTNT-QDLRGMATMLSKRSM 276
           M CNGM+  FFP NF+LQ   P E+ HQ   PP++L+P LP+   QD  G+A++L KRSM
Sbjct: 1   MTCNGMA--FFPANFMLQT--PREDDHQ---PPNSLNPILPSCAPQDFHGVASLLGKRSM 53

Query: 277 SF 282
           SF
Sbjct: 54  SF 55


>ref|XP_004135187.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Cucumis
           sativus] gi|449478430|ref|XP_004155316.1| PREDICTED:
           homeobox-leucine zipper protein ATHB-13-like [Cucumis
           sativus]
          Length = 298

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
 Frame = +1

Query: 100 MACNGMSSSFFPPNFILQMQPPTENGHQHQPPPSNLSPFLPTNT-QDLRGMATMLSKRSM 276
           M  NGM+  FFP NF+LQ      + H H   P +L+P LP+ T QD  G+A+ L KRSM
Sbjct: 1   MTSNGMA--FFPANFMLQPSHEDHDHHHHSNSPPSLNPILPSCTPQDFHGVASFLGKRSM 58

Query: 277 SF 282
           SF
Sbjct: 59  SF 60


>ref|XP_002520111.1| homeobox protein, putative [Ricinus communis]
           gi|223540603|gb|EEF42166.1| homeobox protein, putative
           [Ricinus communis]
          Length = 296

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = +1

Query: 100 MACNGMSSSFFPPNFILQMQPPTENGHQHQPPPSNLSPFLPT-NTQDLRGMATMLSKRSM 276
           M CNGM+  FFP NF+LQ    T +   H  PP++L+P LP+  T D  G+A+ L KRSM
Sbjct: 1   MTCNGMA--FFPANFMLQ----TPHEEDHHQPPTSLNPILPSCTTHDFHGVASFLGKRSM 54

Query: 277 S 279
           S
Sbjct: 55  S 55


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