BLASTX nr result

ID: Dioscorea21_contig00039662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039662
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA93693.1| Bifunctional dihydrofolate reductase-thymidylate ...   140   1e-31
ref|XP_002449495.1| hypothetical protein SORBIDRAFT_05g016730 [S...   129   2e-28
ref|XP_003541010.1| PREDICTED: bifunctional dihydrofolate reduct...   129   2e-28
ref|XP_003606965.1| Bifunctional dihydrofolate reductase-thymidy...   129   2e-28
tpg|DAA41963.1| TPA: bifunctional dihydrofolate reductase-thymid...   127   7e-28

>gb|ABA93693.1| Bifunctional dihydrofolate reductase-thymidylate synthase,
           putative, expressed [Oryza sativa Japonica Group]
          Length = 521

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/90 (76%), Positives = 73/90 (81%)
 Frame = -3

Query: 281 PFNIASYSLLTYMIAHVSGLVPGEFIHVLGDAHVYTTHVRXXXXXXXXXXXXXPILKINP 102
           PFNIASYSLLTYMIAHV GL PGEF+HV+GDAHVY THVR             P+LKINP
Sbjct: 432 PFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQKLPKPFPVLKINP 491

Query: 101 LKKDIDSFVASDFKLIGYDPHYKIEMKMAI 12
           LKKDIDSFVASDFKL+GYDPH KIEMKMAI
Sbjct: 492 LKKDIDSFVASDFKLVGYDPHQKIEMKMAI 521


>ref|XP_002449495.1| hypothetical protein SORBIDRAFT_05g016730 [Sorghum bicolor]
           gi|241935338|gb|EES08483.1| hypothetical protein
           SORBIDRAFT_05g016730 [Sorghum bicolor]
          Length = 521

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/90 (71%), Positives = 70/90 (77%)
 Frame = -3

Query: 281 PFNIASYSLLTYMIAHVSGLVPGEFIHVLGDAHVYTTHVRXXXXXXXXXXXXXPILKINP 102
           PFNIASYSLLTYMIA V  L PG+F+HV+GDAHVY THVR             PILKINP
Sbjct: 432 PFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRTHVRALEEQIQKMPKPFPILKINP 491

Query: 101 LKKDIDSFVASDFKLIGYDPHYKIEMKMAI 12
            KKDIDSF+ASDFKL+GYDPH KIEMKMA+
Sbjct: 492 SKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521


>ref|XP_003541010.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Glycine max]
          Length = 530

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/90 (72%), Positives = 70/90 (77%)
 Frame = -3

Query: 281 PFNIASYSLLTYMIAHVSGLVPGEFIHVLGDAHVYTTHVRXXXXXXXXXXXXXPILKINP 102
           PFNIASY+LLT MIAHV  LVPG+FIHV+GDAHVY  HVR             PILKINP
Sbjct: 441 PFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVRPLQEQLQNQPKPFPILKINP 500

Query: 101 LKKDIDSFVASDFKLIGYDPHYKIEMKMAI 12
            KKDIDSFVA+DFKLIGYDPH KIEMKMA+
Sbjct: 501 KKKDIDSFVAADFKLIGYDPHQKIEMKMAV 530


>ref|XP_003606965.1| Bifunctional dihydrofolate reductase-thymidylate synthase [Medicago
           truncatula] gi|355508020|gb|AES89162.1| Bifunctional
           dihydrofolate reductase-thymidylate synthase [Medicago
           truncatula]
          Length = 528

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/90 (71%), Positives = 70/90 (77%)
 Frame = -3

Query: 281 PFNIASYSLLTYMIAHVSGLVPGEFIHVLGDAHVYTTHVRXXXXXXXXXXXXXPILKINP 102
           PFNIASY+LLTYMIAHV  LVPG+ IHV+GDAHVY  HV+             PILKINP
Sbjct: 439 PFNIASYALLTYMIAHVCDLVPGDLIHVIGDAHVYRNHVKPLQEQLQNLPKPFPILKINP 498

Query: 101 LKKDIDSFVASDFKLIGYDPHYKIEMKMAI 12
            KKDIDSFVA+DFKLIGYDPH KIEMKMA+
Sbjct: 499 KKKDIDSFVAADFKLIGYDPHQKIEMKMAV 528


>tpg|DAA41963.1| TPA: bifunctional dihydrofolate reductase-thymidylate synthase [Zea
           mays]
          Length = 523

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/90 (70%), Positives = 69/90 (76%)
 Frame = -3

Query: 281 PFNIASYSLLTYMIAHVSGLVPGEFIHVLGDAHVYTTHVRXXXXXXXXXXXXXPILKINP 102
           PFNIASYSLLTYMIA V  L PG+F+HV+GDAHVY  HVR             PILKINP
Sbjct: 434 PFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRNHVRALEEQIQKMPKPFPILKINP 493

Query: 101 LKKDIDSFVASDFKLIGYDPHYKIEMKMAI 12
            KKDIDSF+ASDFKL+GYDPH KIEMKMA+
Sbjct: 494 SKKDIDSFMASDFKLVGYDPHQKIEMKMAV 523


Top