BLASTX nr result

ID: Dioscorea21_contig00039659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039659
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange f...   188   4e-46
emb|CBI30469.3| unnamed protein product [Vitis vinifera]              188   4e-46
emb|CBI31584.3| unnamed protein product [Vitis vinifera]              185   3e-45
ref|XP_002312130.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
ref|XP_002323531.1| predicted protein [Populus trichocarpa] gi|2...   184   6e-45

>ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
           vinifera]
          Length = 701

 Score =  188 bits (477), Expect = 4e-46
 Identities = 88/103 (85%), Positives = 92/103 (89%)
 Frame = -1

Query: 310 RREMELLLCVSDHIVELVPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 131
           RREME LLCVSDHIVEL+PSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLE+LD
Sbjct: 262 RREMEWLLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEVLD 321

Query: 130 GFSDTEFWYVDQGILSADHDGSRSFRRNINLQEEKWWFPVPFV 2
            F DTEFWYVDQGIL+ D DGS SFRR +  QEEKWW PVP V
Sbjct: 322 SFEDTEFWYVDQGILAPDTDGSSSFRRPLQRQEEKWWLPVPRV 364


>emb|CBI30469.3| unnamed protein product [Vitis vinifera]
          Length = 1231

 Score =  188 bits (477), Expect = 4e-46
 Identities = 88/103 (85%), Positives = 92/103 (89%)
 Frame = -1

Query: 310  RREMELLLCVSDHIVELVPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 131
            RREME LLCVSDHIVEL+PSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLE+LD
Sbjct: 792  RREMEWLLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEVLD 851

Query: 130  GFSDTEFWYVDQGILSADHDGSRSFRRNINLQEEKWWFPVPFV 2
             F DTEFWYVDQGIL+ D DGS SFRR +  QEEKWW PVP V
Sbjct: 852  SFEDTEFWYVDQGILAPDTDGSSSFRRPLQRQEEKWWLPVPRV 894



 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/103 (67%), Positives = 80/103 (77%)
 Frame = -1

Query: 310 RREMELLLCVSDHIVELVPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 131
           RR+ E LL VSDHIVE  P+WQ FPDGS+ EVMTCR R+DLY NLPALRKLD+ML+E LD
Sbjct: 236 RRDKEWLLSVSDHIVEFTPAWQKFPDGSEGEVMTCRLRADLYANLPALRKLDDMLIETLD 295

Query: 130 GFSDTEFWYVDQGILSADHDGSRSFRRNINLQEEKWWFPVPFV 2
            F DTEFWYV+QGILS   DGS S   +++ QEEK W PVP V
Sbjct: 296 SFEDTEFWYVNQGILSPKADGSSSSPGHLHHQEEKCWLPVPHV 338


>emb|CBI31584.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/103 (82%), Positives = 95/103 (92%)
 Frame = -1

Query: 310 RREMELLLCVSDHIVELVPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 131
           RREMELLLCVSDHIV+L+PSWQTFPDGSKLEVMTCRPRSD++INLPALRKLDNMLLEILD
Sbjct: 160 RREMELLLCVSDHIVQLIPSWQTFPDGSKLEVMTCRPRSDIFINLPALRKLDNMLLEILD 219

Query: 130 GFSDTEFWYVDQGILSADHDGSRSFRRNINLQEEKWWFPVPFV 2
           GF++TEFWYVDQGI++ + DGS SFR+ I  QEEKWW PVP V
Sbjct: 220 GFTNTEFWYVDQGIIAPETDGSASFRKPIQRQEEKWWLPVPRV 262


>ref|XP_002312130.1| predicted protein [Populus trichocarpa] gi|222851950|gb|EEE89497.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/103 (82%), Positives = 92/103 (89%)
 Frame = -1

Query: 310 RREMELLLCVSDHIVELVPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 131
           RREMELLLCV DHIVEL+PSWQTFPDGSKLEVMTCRPRSDL+INLPALRKLDNMLLE+LD
Sbjct: 62  RREMELLLCVGDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFINLPALRKLDNMLLEVLD 121

Query: 130 GFSDTEFWYVDQGILSADHDGSRSFRRNINLQEEKWWFPVPFV 2
            F DTEFWYVDQGI++ D DGS SFR+ +  QEEKWW PVP V
Sbjct: 122 SFVDTEFWYVDQGIVAPDGDGSASFRKTMQRQEEKWWLPVPRV 164


>ref|XP_002323531.1| predicted protein [Populus trichocarpa] gi|222868161|gb|EEF05292.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  184 bits (467), Expect = 6e-45
 Identities = 85/103 (82%), Positives = 91/103 (88%)
 Frame = -1

Query: 310 RREMELLLCVSDHIVELVPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 131
           RREME  LCVSDH+VEL+PSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD
Sbjct: 67  RREMEWFLCVSDHVVELMPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 126

Query: 130 GFSDTEFWYVDQGILSADHDGSRSFRRNINLQEEKWWFPVPFV 2
            F +TEFWY+DQGIL+ D DGS SFRR +  QEEKWW PVP V
Sbjct: 127 SFDNTEFWYIDQGILAPDADGSASFRRTLQRQEEKWWLPVPRV 169


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