BLASTX nr result
ID: Dioscorea21_contig00039651
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00039651 (317 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002535138.1| conserved hypothetical protein [Ricinus comm... 47 5e-09 ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 >ref|XP_002535138.1| conserved hypothetical protein [Ricinus communis] gi|223523943|gb|EEF27244.1| conserved hypothetical protein [Ricinus communis] Length = 57 Score = 47.4 bits (111), Expect(2) = 5e-09 Identities = 23/27 (85%), Positives = 24/27 (88%) Frame = -2 Query: 187 SLYELQVNGAGA*RTEGFIKPFLASTP 107 SLY+ QVNGAGA RTE FIKPFLASTP Sbjct: 31 SLYDKQVNGAGAWRTERFIKPFLASTP 57 Score = 38.1 bits (87), Expect(2) = 5e-09 Identities = 18/26 (69%), Positives = 20/26 (76%) Frame = -3 Query: 315 SIYKVTVIPDCVPEKVVYLTERAGTL 238 +IY V VIPDCVPEKV YL RA +L Sbjct: 7 NIYTVMVIPDCVPEKVAYLKGRALSL 32 >ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|222865651|gb|EEF02782.1| predicted protein [Populus trichocarpa] Length = 83 Score = 56.2 bits (134), Expect = 3e-06 Identities = 33/66 (50%), Positives = 37/66 (56%) Frame = -2 Query: 304 GHGYPGLRSGKSSLLDRKGGHSRVSTPRYFDSCGALCIYSLYELQVNGAGA*RTEGFIKP 125 GHGYPGL SGK RK G + +C YSLY+ QVNG A RT+ FIKP Sbjct: 10 GHGYPGLCSGKK-WPTRKKGRALSCFNSTILLIVVVCTYSLYDKQVNGVSAWRTKQFIKP 68 Query: 124 FLASTP 107 FL TP Sbjct: 69 FLVVTP 74