BLASTX nr result

ID: Dioscorea21_contig00039651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039651
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535138.1| conserved hypothetical protein [Ricinus comm...    47   5e-09
ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002535138.1| conserved hypothetical protein [Ricinus communis]
           gi|223523943|gb|EEF27244.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 57

 Score = 47.4 bits (111), Expect(2) = 5e-09
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -2

Query: 187 SLYELQVNGAGA*RTEGFIKPFLASTP 107
           SLY+ QVNGAGA RTE FIKPFLASTP
Sbjct: 31  SLYDKQVNGAGAWRTERFIKPFLASTP 57



 Score = 38.1 bits (87), Expect(2) = 5e-09
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = -3

Query: 315 SIYKVTVIPDCVPEKVVYLTERAGTL 238
           +IY V VIPDCVPEKV YL  RA +L
Sbjct: 7   NIYTVMVIPDCVPEKVAYLKGRALSL 32


>ref|XP_002324217.1| predicted protein [Populus trichocarpa] gi|222865651|gb|EEF02782.1|
           predicted protein [Populus trichocarpa]
          Length = 83

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/66 (50%), Positives = 37/66 (56%)
 Frame = -2

Query: 304 GHGYPGLRSGKSSLLDRKGGHSRVSTPRYFDSCGALCIYSLYELQVNGAGA*RTEGFIKP 125
           GHGYPGL SGK     RK G +             +C YSLY+ QVNG  A RT+ FIKP
Sbjct: 10  GHGYPGLCSGKK-WPTRKKGRALSCFNSTILLIVVVCTYSLYDKQVNGVSAWRTKQFIKP 68

Query: 124 FLASTP 107
           FL  TP
Sbjct: 69  FLVVTP 74


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