BLASTX nr result

ID: Dioscorea21_contig00039640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039640
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37680.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reduct...    71   1e-10
ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidy...    70   2e-10
sp|P45350.1|DRTS_DAUCA RecName: Full=Bifunctional dihydrofolate ...    69   3e-10
ref|XP_002281129.1| PREDICTED: bifunctional dihydrofolate reduct...    69   3e-10

>emb|CBI37680.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/66 (54%), Positives = 43/66 (65%)
 Frame = +3

Query: 141 IMDGGLPVSIQNGDTQNDPLLMTVENGNVRDDPPRTFQVVVAATRKLGIGKDGKLPWKLP 320
           IM     VS+ NG            N N++ DP RT+QVVVAATR +GIGKDGKLPW+LP
Sbjct: 106 IMASDTVVSLPNG------------NANIQPDPQRTYQVVVAATRDMGIGKDGKLPWRLP 153

Query: 321 SDLKFF 338
           SD+K F
Sbjct: 154 SDMKIF 159


>ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Vitis vinifera]
          Length = 524

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +3

Query: 216 NGNVRDDPPRTFQVVVAATRKLGIGKDGKLPWKLPSDLKFF 338
           N N++ DP RT+QVVVAATR +GIGKDGKLPW+LPSD+K F
Sbjct: 13  NANIQPDPQRTYQVVVAATRDMGIGKDGKLPWRLPSDMKIF 53


>ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Ricinus communis] gi|223547949|gb|EEF49441.1|
           bifunctional dihydrofolate reductase-thymidylate
           synthase, putative [Ricinus communis]
          Length = 528

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/57 (63%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
 Frame = +3

Query: 177 GDTQNDPLLMTVENGNV---RDDPPRTFQVVVAATRKLGIGKDGKLPWKLPSDLKFF 338
           GDT+ +     + NGN    + DP RT+QVVVAATR +GIGKDGKLPW+LPSDLKFF
Sbjct: 3   GDTKAN-----LSNGNANIEQHDPRRTYQVVVAATRDMGIGKDGKLPWRLPSDLKFF 54


>sp|P45350.1|DRTS_DAUCA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase gi|288615|emb|CAA78954.1|
           dihydrofolate reductase-thymidylate synthetase [Daucus
           carota]
          Length = 528

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +3

Query: 216 NGNVRDDPPRTFQVVVAATRKLGIGKDGKLPWKLPSDLKFF 338
           +G  R DP RT+QVVVAAT+ +GIGKDGKLPW+LPSD+KFF
Sbjct: 13  SGITRPDPQRTYQVVVAATQNMGIGKDGKLPWRLPSDMKFF 53


>ref|XP_002281129.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Vitis vinifera]
          Length = 580

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/66 (53%), Positives = 42/66 (63%)
 Frame = +3

Query: 141 IMDGGLPVSIQNGDTQNDPLLMTVENGNVRDDPPRTFQVVVAATRKLGIGKDGKLPWKLP 320
           ++ G   +S  NGD +  P+            P RT+QVVVAAT K+GIGKDGKLPW LP
Sbjct: 53  VLSGDSAMSYPNGDARVHPV------------PQRTYQVVVAATHKMGIGKDGKLPWNLP 100

Query: 321 SDLKFF 338
           SDLKFF
Sbjct: 101 SDLKFF 106


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