BLASTX nr result

ID: Dioscorea21_contig00039630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039630
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   221   6e-56
emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera]   212   3e-53
ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containi...   211   4e-53
ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|2...   208   4e-52
gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]        207   6e-52

>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  221 bits (562), Expect = 6e-56
 Identities = 103/147 (70%), Positives = 119/147 (80%)
 Frame = -3

Query: 465 KLMRGRGLRKNPASSWMETRDGVVHEFFAGDGSHPMTREIKAALEELIDRLKCRGYTPIL 286
           KLMR +GL+KNP  SW+E + G++HEFFAGD SHP +REIK ALE+L+DRLK  GY P L
Sbjct: 501 KLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNL 560

Query: 285 SSIVYDVSESEKRRLLNGHSEKLALAFGLLTVDTGGIIRIVKNIRICEDCHLVMCLASSS 106
           SS+ YD+S+ EK+RLL  HSEKLALAFGLLT + G  IRIVKN+RICEDCH VMC AS  
Sbjct: 561 SSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQI 620

Query: 105 ENREIVVRDNMRFHHFKDGVCSCGGFW 25
             REIVVRDNMRFHHF+DG CSCG FW
Sbjct: 621 TGREIVVRDNMRFHHFRDGRCSCGNFW 647


>emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera]
          Length = 228

 Score =  212 bits (539), Expect = 3e-53
 Identities = 100/144 (69%), Positives = 116/144 (80%)
 Frame = -3

Query: 465 KLMRGRGLRKNPASSWMETRDGVVHEFFAGDGSHPMTREIKAALEELIDRLKCRGYTPIL 286
           KLMR +GL+KNP  SW+E + G++HEFFAGD SHP +REIK ALE+L+DRLK  GY P L
Sbjct: 41  KLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNL 100

Query: 285 SSIVYDVSESEKRRLLNGHSEKLALAFGLLTVDTGGIIRIVKNIRICEDCHLVMCLASSS 106
           SS+ YD+ + EK+RLL  HSEKLALAFGLLT + G  IRIVKN+RICEDCH VMC AS  
Sbjct: 101 SSVAYDIIDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQI 160

Query: 105 ENREIVVRDNMRFHHFKDGVCSCG 34
             REIVVRDNMRFHHF+DG CSCG
Sbjct: 161 TGREIVVRDNMRFHHFRDGGCSCG 184


>ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Brachypodium distachyon]
          Length = 652

 Score =  211 bits (538), Expect = 4e-53
 Identities = 104/147 (70%), Positives = 116/147 (78%)
 Frame = -3

Query: 465 KLMRGRGLRKNPASSWMETRDGVVHEFFAGDGSHPMTREIKAALEELIDRLKCRGYTPIL 286
           K+MR R L+K PA SW E RDG+VH+FFAGD SHP TREIK AL EL+ +LK  GY PIL
Sbjct: 506 KVMRSRRLKKVPAVSWFEGRDGLVHQFFAGDNSHPRTREIKKALLELVAKLKHAGYVPIL 565

Query: 285 SSIVYDVSESEKRRLLNGHSEKLALAFGLLTVDTGGIIRIVKNIRICEDCHLVMCLASSS 106
           SSIVYDVS  EK RLL GHSEKLAL FGLLT+ +   IRIVKN+RIC+DCHL + L S  
Sbjct: 566 SSIVYDVSNEEKERLLMGHSEKLALLFGLLTLGSRCTIRIVKNLRICDDCHLFIRLVSRF 625

Query: 105 ENREIVVRDNMRFHHFKDGVCSCGGFW 25
           E  EI+VRDNMRFHHFKDG CSCGGFW
Sbjct: 626 EPVEIIVRDNMRFHHFKDGECSCGGFW 652


>ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|222836766|gb|EEE75159.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  208 bits (529), Expect = 4e-52
 Identities = 97/147 (65%), Positives = 118/147 (80%)
 Frame = -3

Query: 465 KLMRGRGLRKNPASSWMETRDGVVHEFFAGDGSHPMTREIKAALEELIDRLKCRGYTPIL 286
           KLMR RGLRKNPA SW+E+  G+VHEFF+GD +HP + EIK ALE+L+DRL+ +GY P L
Sbjct: 508 KLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHL 567

Query: 285 SSIVYDVSESEKRRLLNGHSEKLALAFGLLTVDTGGIIRIVKNIRICEDCHLVMCLASSS 106
           SS+ YDV++ +KRR+L  HSEKLALAFGL++   G  IRIVKN+RICEDCH V+C AS  
Sbjct: 568 SSVSYDVNDEDKRRILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQI 627

Query: 105 ENREIVVRDNMRFHHFKDGVCSCGGFW 25
             REI+VRD MRFHHF DG+CSCG FW
Sbjct: 628 TGREIIVRDIMRFHHFHDGICSCGNFW 654


>gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
          Length = 664

 Score =  207 bits (528), Expect = 6e-52
 Identities = 100/147 (68%), Positives = 116/147 (78%)
 Frame = -3

Query: 465 KLMRGRGLRKNPASSWMETRDGVVHEFFAGDGSHPMTREIKAALEELIDRLKCRGYTPIL 286
           KLMR RGL+K+PA SW E RDG VH+FFAGD +HP   EIK  L EL ++L   GY PIL
Sbjct: 518 KLMRIRGLKKDPAVSWFEGRDGFVHQFFAGDNTHPSMHEIKKRLLELREKLNLAGYVPIL 577

Query: 285 SSIVYDVSESEKRRLLNGHSEKLALAFGLLTVDTGGIIRIVKNIRICEDCHLVMCLASSS 106
           SS+VY+VSE EK RLL GHSEKLAL+FGLLT+++   IRIVKN+RICEDCHL + L S  
Sbjct: 578 SSVVYNVSEEEKERLLMGHSEKLALSFGLLTLESRSSIRIVKNLRICEDCHLFIRLVSKV 637

Query: 105 ENREIVVRDNMRFHHFKDGVCSCGGFW 25
           E  EI+VRDNMRFHHF+DG CSCGGFW
Sbjct: 638 EPIEILVRDNMRFHHFRDGECSCGGFW 664


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