BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039624
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
emb|CBI19956.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_003602124.1| Pentatricopeptide repeat-containing protein ...   122   3e-26
ref|XP_002302197.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25

>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/91 (67%), Positives = 71/91 (78%)
 Frame = +3

Query: 3   PQRNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFD 182
           P+RN VT+NAMI G   NGD  SA++LFE+   RTAVTW  MIDGFAR GDT TAR+ FD
Sbjct: 156 PERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFD 215

Query: 183 ETPNELRNVVTWTVMVHGYAARGEMDAAREM 275
           + P+ELRNVVTWTVMV GYA   EM+AARE+
Sbjct: 216 DVPSELRNVVTWTVMVDGYARNAEMEAAREV 246



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/88 (37%), Positives = 52/88 (59%)
 Frame = +3

Query: 9   RNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFDET 188
           RNVVT+  M+ G   N ++++A  +FE  P+R    W++MI G+ + G+   AR +FD  
Sbjct: 222 RNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRI 281

Query: 189 PNELRNVVTWTVMVHGYAARGEMDAARE 272
           P  +RN+V W  ++ GYA  G  + A E
Sbjct: 282 P--VRNLVNWNSLISGYAQNGFSEEALE 307


>emb|CBI19956.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/91 (67%), Positives = 71/91 (78%)
 Frame = +3

Query: 3   PQRNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFD 182
           P+RN VT+NAMI G   NGD  SA++LFE+   RTAVTW  MIDGFAR GDT TAR+ FD
Sbjct: 27  PERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFD 86

Query: 183 ETPNELRNVVTWTVMVHGYAARGEMDAAREM 275
           + P+ELRNVVTWTVMV GYA   EM+AARE+
Sbjct: 87  DVPSELRNVVTWTVMVDGYARNAEMEAAREV 117



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/88 (37%), Positives = 52/88 (59%)
 Frame = +3

Query: 9   RNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFDET 188
           RNVVT+  M+ G   N ++++A  +FE  P+R    W++MI G+ + G+   AR +FD  
Sbjct: 93  RNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRI 152

Query: 189 PNELRNVVTWTVMVHGYAARGEMDAARE 272
           P  +RN+V W  ++ GYA  G  + A E
Sbjct: 153 P--VRNLVNWNSLISGYAQNGFSEEALE 178


>ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Glycine max]
          Length = 535

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/91 (64%), Positives = 72/91 (79%)
 Frame = +3

Query: 3   PQRNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFD 182
           P+RNVVT+NAMI G   NGD +SA ++FE+   +T VTW+ MI GFAR GD  TAR+LFD
Sbjct: 108 PERNVVTWNAMISGYLRNGDTESAYLVFEKMQGKTQVTWSQMIGGFARNGDIATARRLFD 167

Query: 183 ETPNELRNVVTWTVMVHGYAARGEMDAAREM 275
           E P+EL+NVVTWTVMV GYA  GEM+AARE+
Sbjct: 168 EVPHELKNVVTWTVMVDGYARIGEMEAAREV 198



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = +3

Query: 9   RNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFDET 188
           +NVVT+  M+ G    G++++A  +FE  PER    W++MI G+ + G+   A  +FD  
Sbjct: 174 KNVVTWTVMVDGYARIGEMEAAREVFEMMPERNCFVWSSMIHGYFKKGNVTEAAAVFDWV 233

Query: 189 PNELRNVVTWTVMVHGYAARG 251
           P  +RN+  W  M+ GY   G
Sbjct: 234 P--VRNLEIWNSMIAGYVQNG 252


>ref|XP_003602124.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491172|gb|AES72375.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/91 (63%), Positives = 71/91 (78%)
 Frame = +3

Query: 3   PQRNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFD 182
           P+RNVVT+NAMIGG   NGD  SAL+ FE  P +T V+W+ MI GFAR GDT+TARK FD
Sbjct: 113 PERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFD 172

Query: 183 ETPNELRNVVTWTVMVHGYAARGEMDAAREM 275
           + P EL++VV WTVMV GYA +GEM+ ARE+
Sbjct: 173 KVPYELKDVVIWTVMVDGYAKKGEMEDAREV 203



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/88 (31%), Positives = 47/88 (53%)
 Frame = +3

Query: 9   RNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFDET 188
           ++VV +  M+ G    G+++ A  +FE  PER    W++M+ G+ + GD + A  +F   
Sbjct: 179 KDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRI 238

Query: 189 PNELRNVVTWTVMVHGYAARGEMDAARE 272
           P  +RN+  W  M+ GY   G  + A E
Sbjct: 239 P--VRNLEIWNSMIAGYVQNGCGEKALE 264


>ref|XP_002302197.1| predicted protein [Populus trichocarpa] gi|222843923|gb|EEE81470.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/89 (64%), Positives = 70/89 (78%)
 Frame = +3

Query: 3   PQRNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFD 182
           P+RNVVT+NAMI G   NGD+ SA VLF++   R AV+W  MIDGFAR GD V AR+ F+
Sbjct: 19  PERNVVTWNAMISGYGKNGDMKSASVLFDKMSTRNAVSWIEMIDGFARSGDMVAARRTFN 78

Query: 183 ETPNELRNVVTWTVMVHGYAARGEMDAAR 269
           E P EL+NVVTWTVM+ GYA++GEM+AAR
Sbjct: 79  EVPFELKNVVTWTVMIDGYASKGEMEAAR 107



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/86 (38%), Positives = 53/86 (61%)
 Frame = +3

Query: 9   RNVVTYNAMIGGCFMNGDVDSALVLFERSPERTAVTWATMIDGFARIGDTVTARKLFDET 188
           +NVVT+  MI G    G++++A +LFE  P+R    W++MI G+ +IG+   AR +FD  
Sbjct: 85  KNVVTWTVMIDGYASKGEMEAARLLFEDMPQRNFFVWSSMISGYCKIGNVKEARAIFDRV 144

Query: 189 PNELRNVVTWTVMVHGYAARGEMDAA 266
           P  +RN+V W  ++ GY+  G  + A
Sbjct: 145 P--VRNLVNWNSLICGYSQNGFCEEA 168